# HG changeset patch
# User q2d2
# Date 1686252876 0
# Node ID f92a9f40c7e1e1138edd3df85bf0c28d2e35bffd
# Parent  c6780899249e22a5b7c7f16300d45a570e14132f
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__composition commit 65e4952f33eb335528e8553150e9097e5ea8f556

diff -r c6780899249e -r f92a9f40c7e1 qiime2__composition__add_pseudocount.xml
--- a/qiime2__composition__add_pseudocount.xml	Fri Jan 13 22:04:34 2023 +0000
+++ b/qiime2__composition__add_pseudocount.xml	Thu Jun 08 19:34:36 2023 +0000
@@ -6,14 +6,14 @@
 -->
 <!--
 This tool was automatically generated by:
-    q2galaxy (version: 2022.11.1)
+    q2galaxy (version: 2023.5.0)
 for:
-    qiime2 (version: 2022.11.1)
+    qiime2 (version: 2023.5.1)
 -->
-<tool name="qiime2 composition add-pseudocount" id="qiime2__composition__add_pseudocount" version="2022.11.2+q2galaxy.2022.11.1.2" profile="22.05" license="BSD-3-Clause">
-    <description>Add pseudocount to table</description>
+<tool name="qiime2 composition add-pseudocount" id="qiime2__composition__add_pseudocount" version="2023.5.0+q2galaxy.2023.5.0.2" profile="22.05" license="BSD-3-Clause">
+    <description>Add pseudocount to table.</description>
     <requirements>
-        <container type="docker">quay.io/qiime2/core:2022.11</container>
+        <container type="docker">quay.io/qiime2/core:2023.5</container>
     </requirements>
     <version_command>q2galaxy version composition</version_command>
     <command detect_errors="exit_code">q2galaxy run composition add_pseudocount '$inputs'</command>
@@ -38,7 +38,7 @@
     <help>
 QIIME 2: composition add-pseudocount
 ====================================
-Add pseudocount to table
+Add pseudocount to table.
 
 
 Outputs:
@@ -56,7 +56,6 @@
 
 </help>
     <citations>
-        <citation type="doi">10.3402/mehd.v26.27663</citation>
         <citation type="doi">10.1038/s41587-019-0209-9</citation>
     </citations>
 </tool>
diff -r c6780899249e -r f92a9f40c7e1 test-data/ancombc.test0.metadata.tsv
--- a/test-data/ancombc.test0.metadata.tsv	Fri Jan 13 22:04:34 2023 +0000
+++ b/test-data/ancombc.test0.metadata.tsv	Thu Jun 08 19:34:36 2023 +0000
@@ -1,5 +1,5 @@
 sample-id	barcode-sequence	bodysite	month	day	subject	animal	testcolumn	singlecolumn	AZcolumn
-#q2:types	categorical	categorical	numeric	numeric	categorical	categorical	categorical	categorical	categorical
+#q2:types	categorical	categorical	categorical	numeric	categorical	categorical	categorical	categorical	categorical
 L1S8	AGCTGACTAGTC	gut	10	28	subject-1	dog	test1	value	A
 L1S57	ACACACTATGGC	gut	1	20	subject-1	dog	test2	value	Z
 L1S76	ACTACGTGTGGT	gut	2	17	subject-1	cow	test1	value	Z
@@ -34,3 +34,6 @@
 L6S93	GCGTTACACACA	tongue	3	17	subject-2	dog	test1	value	Z
 L6S20	GAACTGTATCTC	tongue	4	14	subject-2	bird	test2	value	Z
 L6S68	CTGGACTCATAG	gut	10	28	subject-2	cow	test1	value	Z
+L6SD93	GCGTTACACACA	toe	3	17	subject-2	dog	test1	value	
+L6SD20	GAACTGTATCTC	toe	4	14	subject-2	bird	test2	value	
+L6SD68	CTGGACTCATAG	toe	10	28	subject-2	cow	test1	value	
diff -r c6780899249e -r f92a9f40c7e1 test-data/ancombc.test0.table.qza
Binary file test-data/ancombc.test0.table.qza has changed
diff -r c6780899249e -r f92a9f40c7e1 test-data/ancombc.test1.metadata.tsv
--- a/test-data/ancombc.test1.metadata.tsv	Fri Jan 13 22:04:34 2023 +0000
+++ b/test-data/ancombc.test1.metadata.tsv	Thu Jun 08 19:34:36 2023 +0000
@@ -1,5 +1,5 @@
 sample-id	barcode-sequence	bodysite	month	day	subject	animal	testcolumn	singlecolumn	AZcolumn
-#q2:types	categorical	categorical	numeric	numeric	categorical	categorical	categorical	categorical	categorical
+#q2:types	categorical	categorical	categorical	numeric	categorical	categorical	categorical	categorical	categorical
 L1S8	AGCTGACTAGTC	gut	10	28	subject-1	dog	test1	value	A
 L1S57	ACACACTATGGC	gut	1	20	subject-1	dog	test2	value	Z
 L1S76	ACTACGTGTGGT	gut	2	17	subject-1	cow	test1	value	Z
@@ -34,3 +34,6 @@
 L6S93	GCGTTACACACA	tongue	3	17	subject-2	dog	test1	value	Z
 L6S20	GAACTGTATCTC	tongue	4	14	subject-2	bird	test2	value	Z
 L6S68	CTGGACTCATAG	gut	10	28	subject-2	cow	test1	value	Z
+L6SD93	GCGTTACACACA	toe	3	17	subject-2	dog	test1	value	
+L6SD20	GAACTGTATCTC	toe	4	14	subject-2	bird	test2	value	
+L6SD68	CTGGACTCATAG	toe	10	28	subject-2	cow	test1	value	
diff -r c6780899249e -r f92a9f40c7e1 test-data/ancombc.test1.table.qza
Binary file test-data/ancombc.test1.table.qza has changed