Mercurial > repos > q2d2 > qiime2__demux__subsample_single
comparison qiime2__demux__subsample_single.xml @ 2:6c2c8696456f draft
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__demux commit 65e4952f33eb335528e8553150e9097e5ea8f556
author | q2d2 |
---|---|
date | Thu, 08 Jun 2023 19:36:21 +0000 |
parents | 12747289fc83 |
children | 4c598bbefcbb |
comparison
equal
deleted
inserted
replaced
1:12747289fc83 | 2:6c2c8696456f |
---|---|
4 | 4 |
5 Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause) | 5 Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause) |
6 --> | 6 --> |
7 <!-- | 7 <!-- |
8 This tool was automatically generated by: | 8 This tool was automatically generated by: |
9 q2galaxy (version: 2022.11.1) | 9 q2galaxy (version: 2023.5.0) |
10 for: | 10 for: |
11 qiime2 (version: 2022.11.1) | 11 qiime2 (version: 2023.5.1) |
12 --> | 12 --> |
13 <tool name="qiime2 demux subsample-single" id="qiime2__demux__subsample_single" version="2022.11.1+q2galaxy.2022.11.1.2" profile="22.05" license="BSD-3-Clause"> | 13 <tool name="qiime2 demux subsample-single" id="qiime2__demux__subsample_single" version="2023.5.0+q2galaxy.2023.5.0.2" profile="22.05" license="BSD-3-Clause"> |
14 <description>Subsample single-end sequences without replacement.</description> | 14 <description>Subsample single-end sequences without replacement.</description> |
15 <requirements> | 15 <requirements> |
16 <container type="docker">quay.io/qiime2/core:2022.11</container> | 16 <container type="docker">quay.io/qiime2/core:2023.5</container> |
17 </requirements> | 17 </requirements> |
18 <version_command>q2galaxy version demux</version_command> | 18 <version_command>q2galaxy version demux</version_command> |
19 <command detect_errors="exit_code">q2galaxy run demux subsample_single '$inputs'</command> | 19 <command detect_errors="exit_code">q2galaxy run demux subsample_single '$inputs'</command> |
20 <configfiles> | 20 <configfiles> |
21 <inputs name="inputs" data_style="paths"/> | 21 <inputs name="inputs" data_style="paths"/> |
22 </configfiles> | 22 </configfiles> |
23 <inputs> | 23 <inputs> |
24 <param name="sequences" type="data" format="qza" label="sequences: SampleData[SequencesWithQuality | PairedEndSequencesWithQuality]" help="[required] The demultiplexed sequences to be subsampled."> | 24 <param name="sequences" type="data" format="qza" label="sequences: SampleData[SequencesWithQuality | PairedEndSequencesWithQuality]" help="[required] The demultiplexed sequences to be subsampled."> |
25 <options options_filter_attribute="metadata.semantic_type"> | 25 <options options_filter_attribute="metadata.semantic_type"> |
26 <filter type="add_value" value="SampleData[PairedEndSequencesWithQuality]"/> | |
26 <filter type="add_value" value="SampleData[SequencesWithQuality]"/> | 27 <filter type="add_value" value="SampleData[SequencesWithQuality]"/> |
27 <filter type="add_value" value="SampleData[PairedEndSequencesWithQuality]"/> | |
28 </options> | 28 </options> |
29 <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['SampleData[PairedEndSequencesWithQuality]', 'SampleData[SequencesWithQuality]']</validator> | 29 <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['SampleData[PairedEndSequencesWithQuality]', 'SampleData[SequencesWithQuality]']</validator> |
30 </param> | 30 </param> |
31 <param name="fraction" type="float" min="1e-06" max="0.999999" value="" label="fraction: Float % Range(0, 1, inclusive_start=False)" help="[required] The fraction of sequences to retain in subsample."/> | 31 <param name="fraction" type="float" min="1e-06" max="0.999999" value="" label="fraction: Float % Range(0, 1, inclusive_start=False)" help="[required] The fraction of sequences to retain in subsample."/> |
32 </inputs> | 32 </inputs> |