# HG changeset patch
# User q2d2
# Date 1762017073 0
# Node ID 2e3f6ea63f90acfa164512828c09b46b735deecb
# Parent  6c6ec1a9b7318503f22b0d7963ef84897fbde063
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__demux commit 64ed09f1f1c680ad8373d261bd6be43a4f8a8d5b

diff -r 6c6ec1a9b731 -r 2e3f6ea63f90 qiime2__demux__tabulate_read_counts.xml
--- a/qiime2__demux__tabulate_read_counts.xml	Tue Jul 15 21:49:10 2025 +0000
+++ b/qiime2__demux__tabulate_read_counts.xml	Sat Nov 01 17:11:13 2025 +0000
@@ -6,17 +6,17 @@
 -->
 <!--
 This tool was automatically generated by:
-    q2galaxy (version: 2025.7.0)
+    q2galaxy (version: 2025.10.0)
 for:
-    qiime2 (version: 2025.7.0)
+    qiime2 (version: 2025.10.0)
 -->
-<tool name="qiime2 demux tabulate-read-counts" id="qiime2__demux__tabulate_read_counts" version="2025.7.0+q2galaxy.2025.7.0" profile="22.05" license="BSD-3-Clause">
+<tool name="qiime2 demux tabulate-read-counts" id="qiime2__demux__tabulate_read_counts" version="2025.10.0+q2galaxy.2025.10.0" profile="22.05" license="BSD-3-Clause">
     <description>Tabulate counts per sample</description>
     <xrefs>
         <xref type="bio.tools">qiime2</xref>
     </xrefs>
     <requirements>
-        <container type="docker">quay.io/qiime2/amplicon:2025.7</container>
+        <container type="docker">quay.io/qiime2/amplicon:2025.10</container>
     </requirements>
     <version_command>q2galaxy version demux</version_command>
     <command detect_errors="exit_code">q2galaxy run demux tabulate_read_counts '$inputs'</command>
@@ -26,9 +26,9 @@
     <inputs>
         <param name="sequences" type="data" format="qza" label="sequences: List[SampleData[SequencesWithQuality | PairedEndSequencesWithQuality | JoinedSequencesWithQuality]]" help="[required]  One or more collections of demultiplexed sequences." multiple="true">
             <options options_filter_attribute="metadata.semantic_type">
+                <filter type="add_value" value="SampleData[SequencesWithQuality]"/>
                 <filter type="add_value" value="SampleData[PairedEndSequencesWithQuality]"/>
                 <filter type="add_value" value="SampleData[JoinedSequencesWithQuality]"/>
-                <filter type="add_value" value="SampleData[SequencesWithQuality]"/>
             </options>
         </param>
     </inputs>
diff -r 6c6ec1a9b731 -r 2e3f6ea63f90 test-data/emp_single.test0.sequences.qza
Binary file test-data/emp_single.test0.sequences.qza has changed
diff -r 6c6ec1a9b731 -r 2e3f6ea63f90 test-data/summarize.test0.demux.qza
Binary file test-data/summarize.test0.demux.qza has changed