changeset 3:4785e02346c5 draft

planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__diversity_lib commit 389df0134cd0763dcf02aac6e623fc15f8861c1e
author q2d2
date Thu, 25 Apr 2024 21:00:33 +0000
parents f740751c2439
children a08147f79fe9
files qiime2__diversity_lib__observed_features.xml test-data/alpha_passthrough.test0.feature-table.qza test-data/beta_passthrough.test0.feature-table.qza test-data/beta_passthrough.test1.feature-table.qza test-data/beta_passthrough.test2.feature-table.qza test-data/beta_passthrough.test3.feature-table.qza test-data/beta_phylogenetic_meta_passthrough.test0.feature-table1.qza test-data/beta_phylogenetic_meta_passthrough.test0.feature-table2.qza test-data/beta_phylogenetic_meta_passthrough.test0.phylogeny1.qza test-data/beta_phylogenetic_meta_passthrough.test0.phylogeny2.qza test-data/beta_phylogenetic_meta_passthrough.test1.feature-table1.qza test-data/beta_phylogenetic_meta_passthrough.test1.feature-table2.qza test-data/beta_phylogenetic_meta_passthrough.test1.phylogeny.qza test-data/beta_phylogenetic_meta_passthrough.test2.feature-table1.qza test-data/beta_phylogenetic_meta_passthrough.test2.feature-table2.qza test-data/beta_phylogenetic_meta_passthrough.test2.phylogeny1.qza test-data/beta_phylogenetic_meta_passthrough.test2.phylogeny2.qza test-data/beta_phylogenetic_passthrough.test0.feature-table.qza test-data/beta_phylogenetic_passthrough.test0.phylogeny.qza test-data/beta_phylogenetic_passthrough.test1.feature-table.qza test-data/beta_phylogenetic_passthrough.test1.phylogeny.qza test-data/beta_phylogenetic_passthrough.test2.feature-table.qza test-data/beta_phylogenetic_passthrough.test2.phylogeny.qza test-data/beta_phylogenetic_passthrough.test3.feature-table.qza test-data/beta_phylogenetic_passthrough.test3.phylogeny.qza test-data/beta_phylogenetic_passthrough.test4.feature-table.qza test-data/beta_phylogenetic_passthrough.test4.phylogeny.qza test-data/beta_phylogenetic_passthrough.test5.feature-table.qza test-data/beta_phylogenetic_passthrough.test5.phylogeny.qza test-data/beta_phylogenetic_passthrough.test6.feature-table.qza test-data/beta_phylogenetic_passthrough.test6.phylogeny.qza test-data/bray_curtis.test0.feature-table.qza test-data/bray_curtis.test1.feature-table.qza test-data/bray_curtis.test2.feature-table.qza test-data/faith_pd.test0.feature-table.qza test-data/faith_pd.test0.phylogeny.qza test-data/jaccard.test0.feature-table.qza test-data/jaccard.test1.feature-table.qza test-data/jaccard.test2.feature-table.qza test-data/observed_features.test0.feature-table.qza test-data/pielou_evenness.test0.feature-table.qza test-data/pielou_evenness.test1.feature-table.qza test-data/shannon_entropy.test0.feature-table.qza test-data/shannon_entropy.test1.feature-table.qza test-data/unweighted_unifrac.test0.feature-table.qza test-data/unweighted_unifrac.test0.phylogeny.qza test-data/unweighted_unifrac.test1.feature-table.qza test-data/unweighted_unifrac.test1.phylogeny.qza test-data/unweighted_unifrac.test2.feature-table.qza test-data/unweighted_unifrac.test2.phylogeny.qza test-data/unweighted_unifrac.test3.feature-table.qza test-data/unweighted_unifrac.test3.phylogeny.qza test-data/weighted_unifrac.test0.feature-table.qza test-data/weighted_unifrac.test0.phylogeny.qza test-data/weighted_unifrac.test1.feature-table.qza test-data/weighted_unifrac.test1.phylogeny.qza test-data/weighted_unifrac.test2.feature-table.qza test-data/weighted_unifrac.test2.phylogeny.qza test-data/weighted_unifrac.test3.feature-table.qza test-data/weighted_unifrac.test3.phylogeny.qza
diffstat 60 files changed, 6 insertions(+), 6 deletions(-) [+]
line wrap: on
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--- a/qiime2__diversity_lib__observed_features.xml	Thu Jun 08 19:42:33 2023 +0000
+++ b/qiime2__diversity_lib__observed_features.xml	Thu Apr 25 21:00:33 2024 +0000
@@ -1,24 +1,24 @@
 <?xml version='1.0' encoding='utf-8'?>
 <!--
-Copyright (c) 2023, QIIME 2 development team.
+Copyright (c) 2024, QIIME 2 development team.
 
 Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause)
 -->
 <!--
 This tool was automatically generated by:
-    q2galaxy (version: 2023.5.0)
+    q2galaxy (version: 2024.2.1)
 for:
-    qiime2 (version: 2023.5.1)
+    qiime2 (version: 2024.2.0)
 -->
-<tool name="qiime2 diversity-lib observed-features" id="qiime2__diversity_lib__observed_features" version="2023.5.0+q2galaxy.2023.5.0.2" profile="22.05" license="BSD-3-Clause">
+<tool name="qiime2 diversity-lib observed-features" id="qiime2__diversity_lib__observed_features" version="2024.2.0+q2galaxy.2024.2.1" profile="22.05" license="BSD-3-Clause">
     <description>Observed Features</description>
     <requirements>
-        <container type="docker">quay.io/qiime2/core:2023.5</container>
+        <container type="docker">quay.io/qiime2/amplicon:2024.2</container>
     </requirements>
     <version_command>q2galaxy version diversity_lib</version_command>
     <command detect_errors="exit_code">q2galaxy run diversity_lib observed_features '$inputs'</command>
     <configfiles>
-        <inputs name="inputs" data_style="paths"/>
+        <inputs name="inputs" data_style="staging_path_and_source_path"/>
     </configfiles>
     <inputs>
         <param name="table" type="data" format="qza" label="table: FeatureTable[Frequency | RelativeFrequency | PresenceAbsence]" help="[required]  The feature table containing the samples for which the number of observed features should be calculated. Table values will be converted to presence/absence.">
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