Mercurial > repos > q2d2 > qiime2__feature_table__relative_frequency
view qiime2__feature_table__relative_frequency.xml @ 2:580e1edc91d7 draft
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__feature_table commit 65e4952f33eb335528e8553150e9097e5ea8f556
author | q2d2 |
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date | Thu, 08 Jun 2023 19:45:58 +0000 |
parents | e0ecbe54ffa8 |
children | 8e63cd00a1a1 |
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<?xml version='1.0' encoding='utf-8'?> <!-- Copyright (c) 2023, QIIME 2 development team. Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause) --> <!-- This tool was automatically generated by: q2galaxy (version: 2023.5.0) for: qiime2 (version: 2023.5.1) --> <tool name="qiime2 feature-table relative-frequency" id="qiime2__feature_table__relative_frequency" version="2023.5.0+q2galaxy.2023.5.0.2" profile="22.05" license="BSD-3-Clause"> <description>Convert to relative frequencies</description> <requirements> <container type="docker">quay.io/qiime2/core:2023.5</container> </requirements> <version_command>q2galaxy version feature_table</version_command> <command detect_errors="exit_code">q2galaxy run feature_table relative_frequency '$inputs'</command> <configfiles> <inputs name="inputs" data_style="paths"/> </configfiles> <inputs> <param name="table" type="data" format="qza" label="table: FeatureTable[Frequency]" help="[required] The feature table to be converted into relative frequencies."> <options options_filter_attribute="metadata.semantic_type"> <filter type="add_value" value="FeatureTable[Frequency]"/> </options> <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['FeatureTable[Frequency]']</validator> </param> </inputs> <outputs> <data name="relative_frequency_table" format="qza" label="${tool.name} on ${on_string}: relative_frequency_table.qza" from_work_dir="relative_frequency_table.qza"/> </outputs> <tests/> <help> QIIME 2: feature-table relative-frequency ========================================= Convert to relative frequencies Outputs: -------- :relative_frequency_table.qza: The resulting relative frequency feature table. | Description: ------------ Convert frequencies to relative frequencies by dividing each frequency in a sample by the sum of frequencies in that sample. | </help> <citations> <citation type="doi">10.1038/s41587-019-0209-9</citation> </citations> </tool>