Mercurial > repos > q2d2 > qiime2__gneiss__ilr_hierarchical
comparison qiime2__gneiss__ilr_hierarchical.xml @ 2:d0feca181800 draft default tip
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__gneiss commit 65e4952f33eb335528e8553150e9097e5ea8f556
| author | q2d2 |
|---|---|
| date | Thu, 08 Jun 2023 19:48:40 +0000 |
| parents | 4dacbd452535 |
| children |
comparison
equal
deleted
inserted
replaced
| 1:4dacbd452535 | 2:d0feca181800 |
|---|---|
| 4 | 4 |
| 5 Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause) | 5 Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause) |
| 6 --> | 6 --> |
| 7 <!-- | 7 <!-- |
| 8 This tool was automatically generated by: | 8 This tool was automatically generated by: |
| 9 q2galaxy (version: 2022.11.1) | 9 q2galaxy (version: 2023.5.0) |
| 10 for: | 10 for: |
| 11 qiime2 (version: 2022.11.1) | 11 qiime2 (version: 2023.5.1) |
| 12 --> | 12 --> |
| 13 <tool name="qiime2 gneiss ilr-hierarchical" id="qiime2__gneiss__ilr_hierarchical" version="2022.11.1+q2galaxy.2022.11.1.2" profile="22.05" license="BSD-3-Clause"> | 13 <tool name="qiime2 gneiss ilr-hierarchical" id="qiime2__gneiss__ilr_hierarchical" version="2023.5.0+q2galaxy.2023.5.0.2" profile="22.05" license="BSD-3-Clause"> |
| 14 <description>Isometric Log-ratio Transform applied to a hierarchical clustering</description> | 14 <description>Isometric Log-ratio Transform applied to a hierarchical clustering</description> |
| 15 <requirements> | 15 <requirements> |
| 16 <container type="docker">quay.io/qiime2/core:2022.11</container> | 16 <container type="docker">quay.io/qiime2/core:2023.5</container> |
| 17 </requirements> | 17 </requirements> |
| 18 <version_command>q2galaxy version gneiss</version_command> | 18 <version_command>q2galaxy version gneiss</version_command> |
| 19 <command detect_errors="exit_code">q2galaxy run gneiss ilr_hierarchical '$inputs'</command> | 19 <command detect_errors="exit_code">q2galaxy run gneiss ilr_hierarchical '$inputs'</command> |
| 20 <configfiles> | 20 <configfiles> |
| 21 <inputs name="inputs" data_style="paths"/> | 21 <inputs name="inputs" data_style="paths"/> |
| 22 </configfiles> | 22 </configfiles> |
| 23 <inputs> | 23 <inputs> |
| 24 <param name="table" type="data" format="qza" label="table: FeatureTable[Frequency | Composition]" help="[required] The feature table containing the samples in which the ilr transform will be performed."> | 24 <param name="table" type="data" format="qza" label="table: FeatureTable[Frequency | Composition]" help="[required] The feature table containing the samples in which the ilr transform will be performed."> |
| 25 <options options_filter_attribute="metadata.semantic_type"> | 25 <options options_filter_attribute="metadata.semantic_type"> |
| 26 <filter type="add_value" value="FeatureTable[Composition]"/> | |
| 26 <filter type="add_value" value="FeatureTable[Frequency]"/> | 27 <filter type="add_value" value="FeatureTable[Frequency]"/> |
| 27 <filter type="add_value" value="FeatureTable[Composition]"/> | |
| 28 </options> | 28 </options> |
| 29 <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['FeatureTable[Composition]', 'FeatureTable[Frequency]']</validator> | 29 <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['FeatureTable[Composition]', 'FeatureTable[Frequency]']</validator> |
| 30 </param> | 30 </param> |
| 31 <param name="tree" type="data" format="qza" label="tree: Hierarchy" help="[required] A hierarchy of feature identifiers that defines the partitions of features. Each tip in the hierarchycorresponds to the feature identifiers in the table. This tree can contain tip ids that are not present in the table, but all feature ids in the table must be present in this tree. This assumes that all of the internal nodes in the tree have labels."> | 31 <param name="tree" type="data" format="qza" label="tree: Hierarchy" help="[required] A hierarchy of feature identifiers that defines the partitions of features. Each tip in the hierarchycorresponds to the feature identifiers in the table. This tree can contain tip ids that are not present in the table, but all feature ids in the table must be present in this tree. This assumes that all of the internal nodes in the tree have labels."> |
| 32 <options options_filter_attribute="metadata.semantic_type"> | 32 <options options_filter_attribute="metadata.semantic_type"> |