# HG changeset patch # User q2d2 # Date 1661803694 0 # Node ID 051101d1008a287e06edd59ac96c393db1342eb2 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__longitudinal commit 9023cfd83495a517fbcbb6f91d5b01a6f1afcda1 diff -r 000000000000 -r 051101d1008a qiime2__longitudinal__pairwise_differences.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/qiime2__longitudinal__pairwise_differences.xml Mon Aug 29 20:08:14 2022 +0000 @@ -0,0 +1,148 @@ + + + + + Paired difference testing and boxplots + + quay.io/qiime2/core:2022.8 + + q2galaxy version longitudinal + q2galaxy run longitudinal pairwise_differences '$inputs' + + + + + + + + + + + + + + + + + + + + + + + value is not None and len(value) > 0 + + + + + + value is not None and len(value) > 0 + + + + + + value is not None and len(value) > 0 + + + + + + value is not None and len(value) > 0 + + + + + + value is not None and len(value) > 0 + +

+ + + + + hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['FeatureTable[RelativeFrequency]'] + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

+ + + + + + +QIIME 2: longitudinal pairwise-differences +========================================== +Paired difference testing and boxplots + + +Outputs: +-------- +:visualization.qzv: <no description> + +| + +Description: +------------ +Performs paired difference testing between samples from each subject. Sample pairs may represent a typical intervention study (e.g., samples collected pre- and post-treatment), paired samples from two different timepoints (e.g., in a longitudinal study design), or identical samples receiving different treatments. This action tests whether the change in a numeric metadata value "metric" differs from zero and differs between groups (e.g., groups of subjects receiving different treatments), and produces boxplots of paired difference distributions for each group. Note that "metric" can be derived from a feature table or metadata. + + +| + + + + 10.1128/mSystems.00219-18 + 10.1038/s41587-019-0209-9 + + diff -r 000000000000 -r 051101d1008a test-data/.gitkeep