# HG changeset patch
# User q2d2
# Date 1762018083 0
# Node ID 4b5eb2ac46bc56fb35f811fc0400d9144d7390e1
# Parent  c5b7513c7a857ab8918f34b91eeb9c2d76ad266a
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__phylogeny commit 64ed09f1f1c680ad8373d261bd6be43a4f8a8d5b

diff -r c5b7513c7a85 -r 4b5eb2ac46bc qiime2__phylogeny__filter_table.xml
--- a/qiime2__phylogeny__filter_table.xml	Tue Jul 15 22:03:09 2025 +0000
+++ b/qiime2__phylogeny__filter_table.xml	Sat Nov 01 17:28:03 2025 +0000
@@ -6,17 +6,17 @@
 -->
 <!--
 This tool was automatically generated by:
-    q2galaxy (version: 2025.7.0)
+    q2galaxy (version: 2025.10.0)
 for:
-    qiime2 (version: 2025.7.0)
+    qiime2 (version: 2025.10.0)
 -->
-<tool name="qiime2 phylogeny filter-table" id="qiime2__phylogeny__filter_table" version="2025.7.0+q2galaxy.2025.7.0" profile="22.05" license="BSD-3-Clause">
+<tool name="qiime2 phylogeny filter-table" id="qiime2__phylogeny__filter_table" version="2025.10.0+q2galaxy.2025.10.0" profile="22.05" license="BSD-3-Clause">
     <description>Remove features from table if they're not present in tree.</description>
     <xrefs>
         <xref type="bio.tools">qiime2</xref>
     </xrefs>
     <requirements>
-        <container type="docker">quay.io/qiime2/amplicon:2025.7</container>
+        <container type="docker">quay.io/qiime2/amplicon:2025.10</container>
     </requirements>
     <version_command>q2galaxy version phylogeny</version_command>
     <command detect_errors="exit_code">q2galaxy run phylogeny filter_table '$inputs'</command>
@@ -34,8 +34,8 @@
         </param>
         <param name="tree" type="data" format="qza" label="tree: Phylogeny[Rooted | Unrooted]" help="[required]  Tree where tip identifiers are the feature identifiers that should be retained in the table.">
             <options options_filter_attribute="metadata.semantic_type">
+                <filter type="add_value" value="Phylogeny[Rooted]"/>
                 <filter type="add_value" value="Phylogeny[Unrooted]"/>
-                <filter type="add_value" value="Phylogeny[Rooted]"/>
             </options>
             <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['Phylogeny[Rooted]', 'Phylogeny[Unrooted]']</validator>
         </param>
diff -r c5b7513c7a85 -r 4b5eb2ac46bc test-data/align_to_tree_mafft_fasttree.test0.rep-seqs.qza
Binary file test-data/align_to_tree_mafft_fasttree.test0.rep-seqs.qza has changed