Mercurial > repos > q2d2 > qiime2__quality_control__bowtie2_build
changeset 3:c2a5d40cd4ae draft
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__quality_control commit 389df0134cd0763dcf02aac6e623fc15f8861c1e
| author | q2d2 |
|---|---|
| date | Thu, 25 Apr 2024 21:18:41 +0000 |
| parents | ea81dc3914f8 |
| children | 7291a764b254 |
| files | qiime2__quality_control__bowtie2_build.xml |
| diffstat | 1 files changed, 6 insertions(+), 9 deletions(-) [+] |
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--- a/qiime2__quality_control__bowtie2_build.xml Thu Jun 08 19:51:10 2023 +0000 +++ b/qiime2__quality_control__bowtie2_build.xml Thu Apr 25 21:18:41 2024 +0000 @@ -1,24 +1,24 @@ <?xml version='1.0' encoding='utf-8'?> <!-- -Copyright (c) 2023, QIIME 2 development team. +Copyright (c) 2024, QIIME 2 development team. Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause) --> <!-- This tool was automatically generated by: - q2galaxy (version: 2023.5.0) + q2galaxy (version: 2024.2.1) for: - qiime2 (version: 2023.5.1) + qiime2 (version: 2024.2.0) --> -<tool name="qiime2 quality-control bowtie2-build" id="qiime2__quality_control__bowtie2_build" version="2023.5.0+q2galaxy.2023.5.0.2" profile="22.05" license="BSD-3-Clause"> +<tool name="qiime2 quality-control bowtie2-build" id="qiime2__quality_control__bowtie2_build" version="2024.2.0+q2galaxy.2024.2.1" profile="22.05" license="BSD-3-Clause"> <description>Build bowtie2 index from reference sequences.</description> <requirements> - <container type="docker">quay.io/qiime2/core:2023.5</container> + <container type="docker">quay.io/qiime2/amplicon:2024.2</container> </requirements> <version_command>q2galaxy version quality_control</version_command> <command detect_errors="exit_code">q2galaxy run quality_control bowtie2_build '$inputs'</command> <configfiles> - <inputs name="inputs" data_style="paths"/> + <inputs name="inputs" data_style="staging_path_and_source_path"/> </configfiles> <inputs> <param name="sequences" type="data" format="qza" label="sequences: FeatureData[Sequence]" help="[required] Reference sequences used to build bowtie2 index."> @@ -27,9 +27,6 @@ </options> <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['FeatureData[Sequence]']</validator> </param> - <section name="__q2galaxy__GUI__section__extra_opts__" title="Click here for additional options"> - <param name="n_threads" type="integer" min="1" value="1" label="n_threads: Int % Range(1, None)" help="[default: 1] Number of threads to launch"/> - </section> </inputs> <outputs> <data name="database" format="qza" label="${tool.name} on ${on_string}: database.qza" from_work_dir="database.qza"/>