Mercurial > repos > q2d2 > qiime2__quality_control__evaluate_taxonomy
comparison qiime2__quality_control__evaluate_taxonomy.xml @ 3:769112ac7a6e draft
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__quality_control commit 389df0134cd0763dcf02aac6e623fc15f8861c1e
author | q2d2 |
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date | Thu, 25 Apr 2024 21:18:47 +0000 |
parents | 13f0559220c2 |
children | de2941482b65 |
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2:13f0559220c2 | 3:769112ac7a6e |
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1 <?xml version='1.0' encoding='utf-8'?> | 1 <?xml version='1.0' encoding='utf-8'?> |
2 <!-- | 2 <!-- |
3 Copyright (c) 2023, QIIME 2 development team. | 3 Copyright (c) 2024, QIIME 2 development team. |
4 | 4 |
5 Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause) | 5 Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause) |
6 --> | 6 --> |
7 <!-- | 7 <!-- |
8 This tool was automatically generated by: | 8 This tool was automatically generated by: |
9 q2galaxy (version: 2023.5.0) | 9 q2galaxy (version: 2024.2.1) |
10 for: | 10 for: |
11 qiime2 (version: 2023.5.1) | 11 qiime2 (version: 2024.2.0) |
12 --> | 12 --> |
13 <tool name="qiime2 quality-control evaluate-taxonomy" id="qiime2__quality_control__evaluate_taxonomy" version="2023.5.0+q2galaxy.2023.5.0.2" profile="22.05" license="BSD-3-Clause"> | 13 <tool name="qiime2 quality-control evaluate-taxonomy" id="qiime2__quality_control__evaluate_taxonomy" version="2024.2.0+q2galaxy.2024.2.1" profile="22.05" license="BSD-3-Clause"> |
14 <description>Evaluate expected vs. observed taxonomic assignments</description> | 14 <description>Evaluate expected vs. observed taxonomic assignments</description> |
15 <requirements> | 15 <requirements> |
16 <container type="docker">quay.io/qiime2/core:2023.5</container> | 16 <container type="docker">quay.io/qiime2/amplicon:2024.2</container> |
17 </requirements> | 17 </requirements> |
18 <version_command>q2galaxy version quality_control</version_command> | 18 <version_command>q2galaxy version quality_control</version_command> |
19 <command detect_errors="exit_code">q2galaxy run quality_control evaluate_taxonomy '$inputs'</command> | 19 <command detect_errors="exit_code">q2galaxy run quality_control evaluate_taxonomy '$inputs'</command> |
20 <configfiles> | 20 <configfiles> |
21 <inputs name="inputs" data_style="paths"/> | 21 <inputs name="inputs" data_style="staging_path_and_source_path"/> |
22 </configfiles> | 22 </configfiles> |
23 <inputs> | 23 <inputs> |
24 <param name="expected_taxa" type="data" format="qza" label="expected_taxa: FeatureData[Taxonomy]" help="[required] Expected taxonomic assignments"> | 24 <param name="expected_taxa" type="data" format="qza" label="expected_taxa: FeatureData[Taxonomy]" help="[required] Expected taxonomic assignments"> |
25 <options options_filter_attribute="metadata.semantic_type"> | 25 <options options_filter_attribute="metadata.semantic_type"> |
26 <filter type="add_value" value="FeatureData[Taxonomy]"/> | 26 <filter type="add_value" value="FeatureData[Taxonomy]"/> |