# HG changeset patch
# User q2d2
# Date 1730318086 0
# Node ID ae9cfce668bfa428ddf1be9824e56632576b826b
# Parent b9948cab53e87fc9e90bec39dbd7ea280ce9598e
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__rescript commit 5f71b597c9495eae67a447744fded834f56ca1f7
diff -r b9948cab53e8 -r ae9cfce668bf qiime2__rescript__cull_seqs.xml
--- a/qiime2__rescript__cull_seqs.xml Mon Jun 03 23:31:15 2024 +0000
+++ b/qiime2__rescript__cull_seqs.xml Wed Oct 30 19:54:46 2024 +0000
@@ -6,14 +6,17 @@
-->
<!--
This tool was automatically generated by:
- q2galaxy (version: 2024.5.0)
+ q2galaxy (version: 2024.10.0)
for:
- qiime2 (version: 2024.5.0)
+ qiime2 (version: 2024.10.1)
-->
-<tool name="qiime2 rescript cull-seqs" id="qiime2__rescript__cull_seqs" version="2024.5.0+q2galaxy.2024.5.0" profile="22.05" license="BSD-3-Clause">
+<tool name="qiime2 rescript cull-seqs" id="qiime2__rescript__cull_seqs" version="2024.10.0+q2galaxy.2024.10.0" profile="22.05" license="BSD-3-Clause">
<description>Removes sequences that contain at least the specified number of degenerate bases and/or homopolymers of a given length.</description>
+ <xrefs>
+ <xref type="bio.tools">qiime2</xref>
+ </xrefs>
<requirements>
- <container type="docker">quay.io/qiime2/amplicon:2024.5</container>
+ <container type="docker">quay.io/qiime2/amplicon:2024.10</container>
</requirements>
<version_command>q2galaxy version rescript</version_command>
<command detect_errors="exit_code">q2galaxy run rescript cull_seqs '$inputs'</command>
@@ -23,8 +26,8 @@
<inputs>
<param name="sequences" type="data" format="qza" label="sequences: FeatureData[Sequence | RNASequence]" help="[required] DNA or RNA Sequences to be screened for removal based on degenerate base and homopolymer screening criteria.">
<options options_filter_attribute="metadata.semantic_type">
+ <filter type="add_value" value="FeatureData[Sequence]"/>
<filter type="add_value" value="FeatureData[RNASequence]"/>
- <filter type="add_value" value="FeatureData[Sequence]"/>
</options>
<validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['FeatureData[RNASequence]', 'FeatureData[Sequence]']</validator>
</param>