# HG changeset patch
# User q2d2
# Date 1746471789 0
# Node ID 80a749825bfd6e7c4901ad376b205fe7fa65f405
# Parent  8d441435b9e6528d4ebca921d39fd259864f88d6
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__rescript commit b1fccfb38b4873cd4699743033449014a2978e7d

diff -r 8d441435b9e6 -r 80a749825bfd qiime2__rescript__extract_seq_segments.xml
--- a/qiime2__rescript__extract_seq_segments.xml	Wed Oct 30 19:55:12 2024 +0000
+++ b/qiime2__rescript__extract_seq_segments.xml	Mon May 05 19:03:09 2025 +0000
@@ -1,22 +1,22 @@
 <?xml version='1.0' encoding='utf-8'?>
 <!--
-Copyright (c) 2024, QIIME 2 development team.
+Copyright (c) 2025, QIIME 2 development team.
 
 Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause)
 -->
 <!--
 This tool was automatically generated by:
-    q2galaxy (version: 2024.10.0)
+    q2galaxy (version: 2025.4.0)
 for:
-    qiime2 (version: 2024.10.1)
+    qiime2 (version: 2025.4.0)
 -->
-<tool name="qiime2 rescript extract-seq-segments" id="qiime2__rescript__extract_seq_segments" version="2024.10.0+q2galaxy.2024.10.0" profile="22.05" license="BSD-3-Clause">
+<tool name="qiime2 rescript extract-seq-segments" id="qiime2__rescript__extract_seq_segments" version="2025.4.0+q2galaxy.2025.4.0" profile="22.05" license="BSD-3-Clause">
     <description>Use reference sequences to extract shorter matching sequence segments from longer sequences based on a user-defined 'perc-identity' value.</description>
     <xrefs>
         <xref type="bio.tools">qiime2</xref>
     </xrefs>
     <requirements>
-        <container type="docker">quay.io/qiime2/amplicon:2024.10</container>
+        <container type="docker">quay.io/qiime2/amplicon:2025.4</container>
     </requirements>
     <version_command>q2galaxy version rescript</version_command>
     <command detect_errors="exit_code">q2galaxy run rescript extract_seq_segments '$inputs'</command>
@@ -39,7 +39,8 @@
         <section name="__q2galaxy__GUI__section__extra_opts__" title="Click here for additional options">
             <param name="perc_identity" type="float" min="1e-06" max="1" value="0.7" label="perc_identity: Float % Range(0, 1, inclusive_start=False, inclusive_end=True)" help="[default: 0.7]  The percent identity at which clustering should be performed. This parameter maps to vsearch's --id parameter."/>
             <param name="target_coverage" type="float" min="1e-06" max="1" value="0.9" label="target_coverage: Float % Range(0, 1, inclusive_start=False, inclusive_end=True)" help="[default: 0.9]  The minimum fraction of coverage that 'reference-segment-sequences' must have in order to extract matching segments from 'input-sequences'."/>
-            <param name="min_seq_len" type="integer" min="1" optional="true" label="min_seq_len: Int % Range(1, None)" help="[optional]  Minimum length of sequence allowed for searching. Any sequence less than this will be discarded. If not set, default program settings will be used."/>
+            <param name="min_seq_len" type="integer" min="1" value="32" label="min_seq_len: Int % Range(1, None)" help="[default: 32]  Minimum length of reference sequence segment allowed for searching. Any sequence less than this will be discarded."/>
+            <param name="max_seq_len" type="integer" min="1" value="50000" label="max_seq_len: Int % Range(1, None)" help="[default: 50000]  Maximum length of reference sequence segment allowed for searching. Any sequence greater than this will be discarded."/>
             <param name="threads" type="integer" min="1" max="255" value="1" label="threads: Int % Range(1, 256)" help="[default: 1]  Number of computation threads to use (1 to 256). The number of threads should be lesser or equal to the number of available CPU cores."/>
         </section>
     </inputs>