Mercurial > repos > q2d2 > qiime2__rescript__get_gtdb_data

changeset 3:6ec1c96f2679 draft default tip

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planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__rescript commit b1fccfb38b4873cd4699743033449014a2978e7d
author q2d2
date Mon, 05 May 2025 19:02:48 +0000
parents 54890a41b15d
children
files qiime2__rescript__get_gtdb_data.xml
diffstat 1 files changed, 12 insertions(+), 7 deletions(-) [+]
line wrap: on
line diff
--- a/qiime2__rescript__get_gtdb_data.xml	Wed Oct 30 19:55:02 2024 +0000
+++ b/qiime2__rescript__get_gtdb_data.xml	Mon May 05 19:02:48 2025 +0000
@@ -1,22 +1,22 @@
 <?xml version='1.0' encoding='utf-8'?>
 <!--
-Copyright (c) 2024, QIIME 2 development team.
+Copyright (c) 2025, QIIME 2 development team.
 
 Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause)
 -->
 <!--
 This tool was automatically generated by:
-    q2galaxy (version: 2024.10.0)
+    q2galaxy (version: 2025.4.0)
 for:
-    qiime2 (version: 2024.10.1)
+    qiime2 (version: 2025.4.0)
 -->
-<tool name="qiime2 rescript get-gtdb-data" id="qiime2__rescript__get_gtdb_data" version="2024.10.0+q2galaxy.2024.10.0" profile="22.05" license="BSD-3-Clause">
+<tool name="qiime2 rescript get-gtdb-data" id="qiime2__rescript__get_gtdb_data" version="2025.4.0+q2galaxy.2025.4.0" profile="22.05" license="BSD-3-Clause">
     <description>Download, parse, and import SSU GTDB reference data.</description>
     <xrefs>
         <xref type="bio.tools">qiime2</xref>
     </xrefs>
     <requirements>
-        <container type="docker">quay.io/qiime2/amplicon:2024.10</container>
+        <container type="docker">quay.io/qiime2/amplicon:2025.4</container>
     </requirements>
     <version_command>q2galaxy version rescript</version_command>
     <command detect_errors="exit_code">q2galaxy run rescript get_gtdb_data '$inputs'</command>
@@ -25,12 +25,13 @@
     </configfiles>
     <inputs>
         <section name="__q2galaxy__GUI__section__extra_opts__" title="Click here for additional options">
-            <param name="version" type="select" label="version: Str % Choices('202.0', '207.0', '214.0', '214.1', '220.0')">
+            <param name="version" type="select" label="version: Str % Choices('202.0', '207.0', '214.0', '214.1', '220.0', '226.0')">
                 <option value="202.0">202.0</option>
                 <option value="207.0">207.0</option>
                 <option value="214.0">214.0</option>
                 <option value="214.1">214.1</option>
-                <option value="220.0" selected="true">220.0</option>
+                <option value="220.0">220.0</option>
+                <option value="226.0" selected="true">226.0</option>
             </param>
             <param name="domain" type="select" label="domain: Str % Choices('Both', 'Bacteria', 'Archaea')" display="radio">
                 <option value="Both" selected="true">Both</option>
@@ -41,6 +42,10 @@
                 <option value="All">All</option>
                 <option value="SpeciesReps" selected="true">SpeciesReps</option>
             </param>
+            <param name="url_type" type="select" label="url_type: Str % Choices('Primary', 'Mirror')" display="radio">
+                <option value="Primary" selected="true">Primary</option>
+                <option value="Mirror">Mirror</option>
+            </param>
         </section>
     </inputs>
     <outputs>