Mercurial > repos > q2d2 > qiime2__rescript__get_silva_data
changeset 2:20d1a7bf2757 draft default tip
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__rescript commit 5f71b597c9495eae67a447744fded834f56ca1f7
| author | q2d2 |
|---|---|
| date | Wed, 30 Oct 2024 19:54:32 +0000 |
| parents | e46b70a4eccd |
| children | |
| files | qiime2__rescript__get_silva_data.xml |
| diffstat | 1 files changed, 10 insertions(+), 6 deletions(-) [+] |
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--- a/qiime2__rescript__get_silva_data.xml Mon Jun 03 23:30:52 2024 +0000 +++ b/qiime2__rescript__get_silva_data.xml Wed Oct 30 19:54:32 2024 +0000 @@ -6,14 +6,17 @@ --> <!-- This tool was automatically generated by: - q2galaxy (version: 2024.5.0) + q2galaxy (version: 2024.10.0) for: - qiime2 (version: 2024.5.0) + qiime2 (version: 2024.10.1) --> -<tool name="qiime2 rescript get-silva-data" id="qiime2__rescript__get_silva_data" version="2024.5.0+q2galaxy.2024.5.0" profile="22.05" license="BSD-3-Clause"> +<tool name="qiime2 rescript get-silva-data" id="qiime2__rescript__get_silva_data" version="2024.10.0+q2galaxy.2024.10.0" profile="22.05" license="BSD-3-Clause"> <description>Download, parse, and import SILVA database.</description> + <xrefs> + <xref type="bio.tools">qiime2</xref> + </xrefs> <requirements> - <container type="docker">quay.io/qiime2/amplicon:2024.5</container> + <container type="docker">quay.io/qiime2/amplicon:2024.10</container> </requirements> <version_command>q2galaxy version rescript</version_command> <command detect_errors="exit_code">q2galaxy run rescript get_silva_data '$inputs'</command> @@ -22,11 +25,12 @@ </configfiles> <inputs> <section name="__q2galaxy__GUI__section__extra_opts__" title="Click here for additional options"> - <param name="version" type="select" label="version: Str % Choices('128', '132')¹ | Str % Choices('138')² | Str % Choices('138.1')³" help="[default: '138.1'] SILVA database version to download."> + <param name="version" type="select" label="version: Str % Choices('128', '132')¹ | Str % Choices('138')² | Str % Choices('138.1', '138.2')³" help="[default: '138.2'] SILVA database version to download."> <option value="128">128 (Str)</option> <option value="132">132 (Str)</option> <option value="138">138 (Str)</option> - <option value="138.1" selected="true">138.1 (Str)</option> + <option value="138.1">138.1 (Str)</option> + <option value="138.2" selected="true">138.2 (Str)</option> </param> <param name="target" type="select" label="target: Str % Choices('SSURef_NR99', 'SSURef', 'LSURef')¹ | Str % Choices('SSURef_NR99', 'SSURef')² | Str % Choices('SSURef_NR99', 'SSURef', 'LSURef_NR99', 'LSURef')³" help="[default: 'SSURef_NR99'] Reference sequence target to download. SSURef = redundant small subunit reference. LSURef = redundant large subunit reference. SSURef_NR99 = non-redundant (clustered at 99% similarity) small subunit reference."> <option value="SSURef_NR99" selected="true">SSURef_NR99 (Str)</option>