Mercurial > repos > q2d2 > qiime2__rescript__reverse_transcribe
comparison qiime2__rescript__reverse_transcribe.xml @ 2:88d424eb235a draft default tip
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__rescript commit 5f71b597c9495eae67a447744fded834f56ca1f7
author | q2d2 |
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date | Wed, 30 Oct 2024 19:55:43 +0000 |
parents | 0c573b77cb99 |
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1:0c573b77cb99 | 2:88d424eb235a |
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5 Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause) | 5 Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause) |
6 --> | 6 --> |
7 <!-- | 7 <!-- |
8 This tool was automatically generated by: | 8 This tool was automatically generated by: |
9 q2galaxy (version: 2024.5.0) | 9 q2galaxy (version: 2024.10.0) |
10 for: | 10 for: |
11 qiime2 (version: 2024.5.0) | 11 qiime2 (version: 2024.10.1) |
12 --> | 12 --> |
13 <tool name="qiime2 rescript reverse-transcribe" id="qiime2__rescript__reverse_transcribe" version="2024.5.0+q2galaxy.2024.5.0" profile="22.05" license="BSD-3-Clause"> | 13 <tool name="qiime2 rescript reverse-transcribe" id="qiime2__rescript__reverse_transcribe" version="2024.10.0+q2galaxy.2024.10.0" profile="22.05" license="BSD-3-Clause"> |
14 <description>Reverse transcribe RNA to DNA sequences.</description> | 14 <description>Reverse transcribe RNA to DNA sequences.</description> |
15 <xrefs> | |
16 <xref type="bio.tools">qiime2</xref> | |
17 </xrefs> | |
15 <requirements> | 18 <requirements> |
16 <container type="docker">quay.io/qiime2/amplicon:2024.5</container> | 19 <container type="docker">quay.io/qiime2/amplicon:2024.10</container> |
17 </requirements> | 20 </requirements> |
18 <version_command>q2galaxy version rescript</version_command> | 21 <version_command>q2galaxy version rescript</version_command> |
19 <command detect_errors="exit_code">q2galaxy run rescript reverse_transcribe '$inputs'</command> | 22 <command detect_errors="exit_code">q2galaxy run rescript reverse_transcribe '$inputs'</command> |
20 <configfiles> | 23 <configfiles> |
21 <inputs name="inputs" data_style="staging_path_and_source_path"/> | 24 <inputs name="inputs" data_style="staging_path_and_source_path"/> |
22 </configfiles> | 25 </configfiles> |
23 <inputs> | 26 <inputs> |
24 <param name="rna_sequences" type="data" format="qza" label="rna_sequences: FeatureData[AlignedRNASequence¹ | RNASequence²]" help="[required] RNA Sequences to reverse transcribe to DNA."> | 27 <param name="rna_sequences" type="data" format="qza" label="rna_sequences: FeatureData[AlignedRNASequence¹ | RNASequence²]" help="[required] RNA Sequences to reverse transcribe to DNA."> |
25 <options options_filter_attribute="metadata.semantic_type"> | 28 <options options_filter_attribute="metadata.semantic_type"> |
29 <filter type="add_value" value="FeatureData[AlignedRNASequence]"/> | |
26 <filter type="add_value" value="FeatureData[RNASequence]"/> | 30 <filter type="add_value" value="FeatureData[RNASequence]"/> |
27 <filter type="add_value" value="FeatureData[AlignedRNASequence]"/> | |
28 </options> | 31 </options> |
29 <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['FeatureData[AlignedRNASequence]', 'FeatureData[RNASequence]']</validator> | 32 <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['FeatureData[AlignedRNASequence]', 'FeatureData[RNASequence]']</validator> |
30 </param> | 33 </param> |
31 </inputs> | 34 </inputs> |
32 <outputs> | 35 <outputs> |