Mercurial > repos > q2d2 > qiime2__sample_classifier__classify_samples_from_dist
changeset 3:3287c7a4f1a6 draft
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__sample_classifier commit 389df0134cd0763dcf02aac6e623fc15f8861c1e
author | q2d2 |
---|---|
date | Thu, 25 Apr 2024 21:26:33 +0000 |
parents | aeb2a22548a5 |
children | 2dad5e35f34c |
files | qiime2__sample_classifier__classify_samples_from_dist.xml |
diffstat | 1 files changed, 6 insertions(+), 7 deletions(-) [+] |
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--- a/qiime2__sample_classifier__classify_samples_from_dist.xml Thu Jun 08 19:52:20 2023 +0000 +++ b/qiime2__sample_classifier__classify_samples_from_dist.xml Thu Apr 25 21:26:33 2024 +0000 @@ -1,24 +1,24 @@ <?xml version='1.0' encoding='utf-8'?> <!-- -Copyright (c) 2023, QIIME 2 development team. +Copyright (c) 2024, QIIME 2 development team. Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause) --> <!-- This tool was automatically generated by: - q2galaxy (version: 2023.5.0) + q2galaxy (version: 2024.2.1) for: - qiime2 (version: 2023.5.1) + qiime2 (version: 2024.2.0) --> -<tool name="qiime2 sample-classifier classify-samples-from-dist" id="qiime2__sample_classifier__classify_samples_from_dist" version="2023.5.0+q2galaxy.2023.5.0.2" profile="22.05" license="BSD-3-Clause"> +<tool name="qiime2 sample-classifier classify-samples-from-dist" id="qiime2__sample_classifier__classify_samples_from_dist" version="2024.2.0+q2galaxy.2024.2.1" profile="22.05" license="BSD-3-Clause"> <description>Run k-nearest-neighbors on a labeled distance matrix.</description> <requirements> - <container type="docker">quay.io/qiime2/core:2023.5</container> + <container type="docker">quay.io/qiime2/amplicon:2024.2</container> </requirements> <version_command>q2galaxy version sample_classifier</version_command> <command detect_errors="exit_code">q2galaxy run sample_classifier classify_samples_from_dist '$inputs'</command> <configfiles> - <inputs name="inputs" data_style="paths"/> + <inputs name="inputs" data_style="staging_path_and_source_path"/> </configfiles> <inputs> <param name="distance_matrix" type="data" format="qza" label="distance_matrix: DistanceMatrix" help="[required] a distance matrix"> @@ -49,7 +49,6 @@ <param name="k" type="integer" value="1" label="k: Int" help="[default: 1] Number of nearest neighbors"/> <param name="cv" type="integer" min="1" value="5" label="cv: Int % Range(1, None)" help="[default: 5] Number of k-fold cross-validations to perform."/> <param name="random_state" type="integer" optional="true" label="random_state: Int" help="[optional] Seed used by random number generator."/> - <param name="n_jobs" type="integer" value="1" label="n_jobs: Int" help="[default: 1] Number of jobs to run in parallel."/> <param name="palette" type="select" label="palette: Str % Choices('YellowOrangeBrown', 'YellowOrangeRed', 'OrangeRed', 'PurpleRed', 'RedPurple', 'BluePurple', 'GreenBlue', 'PurpleBlue', 'YellowGreen', 'summer', 'copper', 'viridis', 'cividis', 'plasma', 'inferno', 'magma', 'sirocco', 'drifting', 'melancholy', 'enigma', 'eros', 'spectre', 'ambition', 'mysteriousstains', 'daydream', 'solano', 'navarro', 'dandelions', 'deepblue', 'verve', 'greyscale')"> <option value="YellowOrangeBrown">YellowOrangeBrown</option> <option value="YellowOrangeRed">YellowOrangeRed</option>