comparison qiime2__stats__facet_across.xml @ 0:caf764ebca30 draft default tip

planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__stats commit 5f71b597c9495eae67a447744fded834f56ca1f7
author q2d2
date Wed, 30 Oct 2024 19:57:22 +0000
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:caf764ebca30
1 <?xml version='1.0' encoding='utf-8'?>
2 <!--
3 Copyright (c) 2024, QIIME 2 development team.
4
5 Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause)
6 -->
7 <!--
8 This tool was automatically generated by:
9 q2galaxy (version: 2024.10.0)
10 for:
11 qiime2 (version: 2024.10.1)
12 -->
13 <tool name="qiime2 stats facet-across" id="qiime2__stats__facet_across" version="0+unknown-q2galaxy.2024.10.0" profile="22.05" license="BSD-3-Clause">
14 <description>Facet across outer group</description>
15 <xrefs>
16 <xref type="bio.tools">qiime2</xref>
17 </xrefs>
18 <requirements>
19 <container type="docker">quay.io/qiime2/amplicon:2024.10</container>
20 </requirements>
21 <version_command>q2galaxy version stats</version_command>
22 <command detect_errors="exit_code">q2galaxy run stats facet_across '$inputs'</command>
23 <configfiles>
24 <inputs name="inputs" data_style="staging_path_and_source_path"/>
25 </configfiles>
26 <inputs>
27 <param name="distribution" type="data" format="qza" label="distribution: Dist1D[NestedOrdered¹ | NestedUnordered², Independent¹ | Matched²]" help="[required] A nested Dist1D which will be partitioned into non-nested Dist1D">
28 <options options_filter_attribute="metadata.semantic_type">
29 <filter type="add_value" value="Dist1D[NestedOrdered, Matched]"/>
30 <filter type="add_value" value="Dist1D[NestedUnordered, Matched]"/>
31 <filter type="add_value" value="Dist1D[NestedOrdered, Independent]"/>
32 <filter type="add_value" value="Dist1D[NestedUnordered, Independent]"/>
33 </options>
34 <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['Dist1D[NestedOrdered, Independent]', 'Dist1D[NestedOrdered, Matched]', 'Dist1D[NestedUnordered, Independent]', 'Dist1D[NestedUnordered, Matched]']</validator>
35 </param>
36 </inputs>
37 <outputs>
38 <collection name="distributions" type="list">
39 <discover_datasets directory="distributions" pattern="__name_and_ext__"/>
40 </collection>
41 </outputs>
42 <tests/>
43 <help>
44 QIIME 2: stats facet-across
45 ===========================
46 Facet across outer group
47
48
49 Outputs:
50 --------
51 :distributions.qza: A collection of non-nested Dist1Ds
52
53 |
54
55 Description:
56 ------------
57 Facet a distribution into per-class/level distributions where each facet preserves the outer group structure.
58
59
60 |
61
62 </help>
63 <citations>
64 <citation type="doi">10.1038/s41587-019-0209-9</citation>
65 </citations>
66 </tool>