# HG changeset patch
# User q2d2
# Date 1717457542 0
# Node ID a8972ecf15c1227552e00c340faec75f4a290580
# Parent  e4872ac2c683969c0c9584875760d9b7eb608a12
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__taxa commit c7e80dcda727ce63b42aa8a946e9330310929797

diff -r e4872ac2c683 -r a8972ecf15c1 qiime2__taxa__filter_table.xml
--- a/qiime2__taxa__filter_table.xml	Thu Apr 25 21:27:14 2024 +0000
+++ b/qiime2__taxa__filter_table.xml	Mon Jun 03 23:32:22 2024 +0000
@@ -6,14 +6,14 @@
 -->
 <!--
 This tool was automatically generated by:
-    q2galaxy (version: 2024.2.1)
+    q2galaxy (version: 2024.5.0)
 for:
-    qiime2 (version: 2024.2.0)
+    qiime2 (version: 2024.5.0)
 -->
-<tool name="qiime2 taxa filter-table" id="qiime2__taxa__filter_table" version="2024.2.0+q2galaxy.2024.2.1" profile="22.05" license="BSD-3-Clause">
+<tool name="qiime2 taxa filter-table" id="qiime2__taxa__filter_table" version="2024.5.0+q2galaxy.2024.5.0" profile="22.05" license="BSD-3-Clause">
     <description>Taxonomy-based feature table filter.</description>
     <requirements>
-        <container type="docker">quay.io/qiime2/amplicon:2024.2</container>
+        <container type="docker">quay.io/qiime2/amplicon:2024.5</container>
     </requirements>
     <version_command>q2galaxy version taxa</version_command>
     <command detect_errors="exit_code">q2galaxy run taxa filter_table '$inputs'</command>
@@ -21,11 +21,12 @@
         <inputs name="inputs" data_style="staging_path_and_source_path"/>
     </configfiles>
     <inputs>
-        <param name="table" type="data" format="qza" label="table: FeatureTable[Frequency]" help="[required]  Feature table to be filtered.">
+        <param name="table" type="data" format="qza" label="table: FeatureTable[Frequency¹ | PresenceAbsence²]" help="[required]  Feature table to be filtered.">
             <options options_filter_attribute="metadata.semantic_type">
                 <filter type="add_value" value="FeatureTable[Frequency]"/>
+                <filter type="add_value" value="FeatureTable[PresenceAbsence]"/>
             </options>
-            <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['FeatureTable[Frequency]']</validator>
+            <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['FeatureTable[Frequency]', 'FeatureTable[PresenceAbsence]']</validator>
         </param>
         <param name="taxonomy" type="data" format="qza" label="taxonomy: FeatureData[Taxonomy]" help="[required]  Taxonomic annotations for features in the provided feature table. All features in the feature table must have a corresponding taxonomic annotation. Taxonomic annotations for features that are not present in the feature table will be ignored.">
             <options options_filter_attribute="metadata.semantic_type">
diff -r e4872ac2c683 -r a8972ecf15c1 test-data/barplot.test0.table.qza
Binary file test-data/barplot.test0.table.qza has changed
diff -r e4872ac2c683 -r a8972ecf15c1 test-data/barplot.test0.taxonomy.qza
Binary file test-data/barplot.test0.taxonomy.qza has changed
diff -r e4872ac2c683 -r a8972ecf15c1 test-data/collapse.test0.table.qza
Binary file test-data/collapse.test0.table.qza has changed
diff -r e4872ac2c683 -r a8972ecf15c1 test-data/collapse.test0.taxonomy.qza
Binary file test-data/collapse.test0.taxonomy.qza has changed