# HG changeset patch
# User q2d2
# Date 1714080468 0
# Node ID a7e23c72f3444417168fe7ffef959b986af59741
# Parent  397c1be954c277581a6492dc63127204622ddf45
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vsearch commit 389df0134cd0763dcf02aac6e623fc15f8861c1e

diff -r 397c1be954c2 -r a7e23c72f344 qiime2__vsearch__cluster_features_de_novo.xml
--- a/qiime2__vsearch__cluster_features_de_novo.xml	Thu Jun 08 19:53:07 2023 +0000
+++ b/qiime2__vsearch__cluster_features_de_novo.xml	Thu Apr 25 21:27:48 2024 +0000
@@ -1,24 +1,24 @@
 <?xml version='1.0' encoding='utf-8'?>
 <!--
-Copyright (c) 2023, QIIME 2 development team.
+Copyright (c) 2024, QIIME 2 development team.
 
 Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause)
 -->
 <!--
 This tool was automatically generated by:
-    q2galaxy (version: 2023.5.0)
+    q2galaxy (version: 2024.2.1)
 for:
-    qiime2 (version: 2023.5.1)
+    qiime2 (version: 2024.2.0)
 -->
-<tool name="qiime2 vsearch cluster-features-de-novo" id="qiime2__vsearch__cluster_features_de_novo" version="2023.5.0+q2galaxy.2023.5.0.2" profile="22.05" license="BSD-3-Clause">
+<tool name="qiime2 vsearch cluster-features-de-novo" id="qiime2__vsearch__cluster_features_de_novo" version="2024.2.0+q2galaxy.2024.2.1" profile="22.05" license="BSD-3-Clause">
     <description>De novo clustering of features.</description>
     <requirements>
-        <container type="docker">quay.io/qiime2/core:2023.5</container>
+        <container type="docker">quay.io/qiime2/amplicon:2024.2</container>
     </requirements>
     <version_command>q2galaxy version vsearch</version_command>
     <command detect_errors="exit_code">q2galaxy run vsearch cluster_features_de_novo '$inputs'</command>
     <configfiles>
-        <inputs name="inputs" data_style="paths"/>
+        <inputs name="inputs" data_style="staging_path_and_source_path"/>
     </configfiles>
     <inputs>
         <param name="sequences" type="data" format="qza" label="sequences: FeatureData[Sequence]" help="[required]  The sequences corresponding to the features in table.">
@@ -35,7 +35,10 @@
         </param>
         <param name="perc_identity" type="float" min="1e-06" max="1" value="" label="perc_identity: Float % Range(0, 1, inclusive_start=False, inclusive_end=True)" help="[required]  The percent identity at which clustering should be performed. This parameter maps to vsearch's --id parameter."/>
         <section name="__q2galaxy__GUI__section__extra_opts__" title="Click here for additional options">
-            <param name="threads" type="integer" min="0" max="256" value="1" label="threads: Int % Range(0, 256, inclusive_end=True)" help="[default: 1]  The number of threads to use for computation. Passing 0 will launch one thread per CPU core."/>
+            <param name="strand" type="select" label="strand: Str % Choices('plus', 'both')" display="radio">
+                <option value="plus" selected="true">plus</option>
+                <option value="both">both</option>
+            </param>
         </section>
     </inputs>
     <outputs>