Mercurial > repos > q2d2 > qiime2__vsearch__uchime_ref

comparison qiime2__vsearch__uchime_ref.xml @ 6:b1a6337f9f18 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vsearch commit b1fccfb38b4873cd4699743033449014a2978e7d
author q2d2
date Mon, 05 May 2025 19:05:48 +0000
parents 74b478765f80
children
comparison
equal deleted inserted replaced
5:74b478765f80 6:b1a6337f9f18
1 <?xml version='1.0' encoding='utf-8'?> 1 <?xml version='1.0' encoding='utf-8'?>
2 <!-- 2 <!--
3 Copyright (c) 2024, QIIME 2 development team. 3 Copyright (c) 2025, QIIME 2 development team.
4 4
5 Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause) 5 Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause)
6 --> 6 -->
7 <!-- 7 <!--
8 This tool was automatically generated by: 8 This tool was automatically generated by:
9 q2galaxy (version: 2024.10.0) 9 q2galaxy (version: 2025.4.0)
10 for: 10 for:
11 qiime2 (version: 2024.10.1) 11 qiime2 (version: 2025.4.0)
12 --> 12 -->
13 <tool name="qiime2 vsearch uchime-ref" id="qiime2__vsearch__uchime_ref" version="2024.10.0+q2galaxy.2024.10.0" profile="22.05" license="BSD-3-Clause"> 13 <tool name="qiime2 vsearch uchime-ref" id="qiime2__vsearch__uchime_ref" version="2025.4.0+q2galaxy.2025.4.0" profile="22.05" license="BSD-3-Clause">
14 <description>Reference-based chimera filtering with vsearch.</description> 14 <description>Reference-based chimera filtering.</description>
15 <xrefs> 15 <xrefs>
16 <xref type="bio.tools">qiime2</xref> 16 <xref type="bio.tools">qiime2</xref>
17 </xrefs> 17 </xrefs>
18 <requirements> 18 <requirements>
19 <container type="docker">quay.io/qiime2/amplicon:2024.10</container> 19 <container type="docker">quay.io/qiime2/amplicon:2025.4</container>
20 </requirements> 20 </requirements>
21 <version_command>q2galaxy version vsearch</version_command> 21 <version_command>q2galaxy version vsearch</version_command>
22 <command detect_errors="exit_code">q2galaxy run vsearch uchime_ref '$inputs'</command> 22 <command detect_errors="exit_code">q2galaxy run vsearch uchime_ref '$inputs'</command>
23 <configfiles> 23 <configfiles>
24 <inputs name="inputs" data_style="staging_path_and_source_path"/> 24 <inputs name="inputs" data_style="staging_path_and_source_path"/>
57 </outputs> 57 </outputs>
58 <tests/> 58 <tests/>
59 <help> 59 <help>
60 QIIME 2: vsearch uchime-ref 60 QIIME 2: vsearch uchime-ref
61 =========================== 61 ===========================
62 Reference-based chimera filtering with vsearch. 62 Reference-based chimera filtering.
63 63
64 64
65 Outputs: 65 Outputs:
66 -------- 66 --------
67 :chimeras.qza: The chimeric sequences. 67 :chimeras.qza: The chimeric sequences.