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1 Galaxy wrappers for USEARCH - Dereplication
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2 ============================================
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3
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4 USEARCH requires a licence. Therefore an automated installation is not
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5 possible at the moment.
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6
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7 Requirements
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8 ============================================
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9
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10 Get your licenced USEARCH version 7 or greater from here:
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11 http://www.drive5.com/usearch/download.html
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12
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13
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14 Manual Installation Steps
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15 ============================================
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16
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17 USEARCH is distributed as one file, known as the binary file or executable
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18 file. It is completely self-contained: it does not require configuration
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19 files, environment variables, third-party libraries or other external
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20 dependencies. There is no setup script or installer because they're not
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21 needed. To install it, all you do is download or copy the binary to a
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22 directory that is accessible from the computer where you want to run the code.
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23
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24 Step1:
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25 Rename the binary file to usearch.
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26
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27 Step2:
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28 Move the binary file (usearch) to /usr/local/bin
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29 Ensure /usr/local/bin is in your path. If needed add /usr/local/bin/ to your
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30 path.
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31
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32 Step3:
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33 Ensure that you have read and execute permissions for the binary file.
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34 If needed, use the chmod command to set the execute bit, e.g.:
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35 chmod +x /usr/local/bin/usearch
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36
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37
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38 Further installation information and help can be found at:
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39 http://drive5.com/usearch/manual/install.html
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40
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41
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42 Disclaimer
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43 =====================================================
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44 This source code is provided by QFAB Bioinformatics "as is", in the hope that it will be
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45 useful, and any express or implied warranties, including, but not limited to,
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46 the implied warranties of merchantability and fitness for a particular purpose
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47 are disclaimed.
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48 IN NO EVENT SHALL QFAB BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
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49 SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY
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50 OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT(INCLUDING
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51 NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOURCE
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52 CODE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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53
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54
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55 License
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56 =====================================================
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57 This work by QFAB Bioinformatics (as part of the GVL project
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58 http://genome.edu.au)
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59 is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0
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60 International License.
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