comparison test-data/F3D0.log @ 0:ec62f17fcfe6 draft default tip

"planemo upload for repository https://github.com/QFAB-Bioinformatics/metaDEGalaxy/tree/master/pear_stats commit 0db3cb4e9a87400bb2f8402ffc23334e24ad4b4e"

0:ec62f17fcfe6

 ____  _____    _    ____ 
|  _ \| ____|  / \  |  _ \
| |_) |  _|   / _ \ | |_) |
|  __/| |___ / ___ \|  _ <
|_|   |_____/_/   \_\_| \_\

PEAR v0.9.10 [May 30, 2016]

Citation - PEAR: a fast and accurate Illumina Paired-End reAd mergeR
Zhang et al (2014) Bioinformatics 30(5): 614-620 | doi:10.1093/bioinformatics/btt593

Forward reads file.................: /mnt/galaxy/files/011/dataset_11542.dat
Reverse reads file.................: /mnt/galaxy/files/011/dataset_11543.dat
PHRED..............................: 33
Using empirical frequencies........: NO
Statistical method.................: OES
Maximum assembly length............: 999999
Minimum assembly length............: 50
p-value............................: 0.010000
Quality score threshold (trimming).: 0
Minimum read size after trimming...: 1
Maximal ratio of uncalled bases....: 1.000000
Minimum overlap....................: 10
Scoring method.....................: Scaled score
Threads............................: 2

Allocating memory..................: 200,000,000 bytes
Assemblying reads: 0%
Assemblying reads: 100%

Assembled reads ...................: 91 / 99 (91.919%)
Discarded reads ...................: 0 / 99 (0.000%)
Not assembled reads ...............: 8 / 99 (8.081%)
Assembled reads file...............: pear.assembled.fastq
Discarded reads file...............: pear.discarded.fastq
Unassembled forward reads file.....: pear.unassembled.forward.fastq
Unassembled reverse reads file.....: pear.unassembled.reverse.fastq