Mercurial > repos > rakesh4osdd > clsi_profile

comparison test-data/input.csv @ 3:683299422575 draft

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"planemo upload for repository https://github.com/rakesh4osdd/asist/tree/master commit f085b88bf75f7b45ac3b0c4e1c39214c0ac0b67d"
author rakesh4osdd
date Tue, 29 Jun 2021 05:20:41 +0000
parents 62226cd1acb5
children
comparison
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2:306236ec0511 3:683299422575
1 id,genome Ids,Strain name,Antibiotics,Resistance_profile,sign,MIC,unit 1 id,Strain name,Antibiotics,Resistance_profile,sign,MIC,unit
2 470,CP021782.1,Acinetobacter baumannii A85,Colistin,Susceptible ,NA,0.1,mg/L 2 470,Acinetobacter baumannii A85,Colistin,Susceptible ,NA,0.1,mg/L
3 470,CP021782.1,Acinetobacter baumannii A85,Colistin,Susceptible ,NA,1,mg/L 3 470,Acinetobacter baumannii A85,Colistin,Susceptible ,NA,1,mg/L
4 470,CP021782.1,Acinetobacter baumannii A85,Colistin,Susceptible ,NA,2,mg/L 4 470,Acinetobacter baumannii A85,Colistin,Susceptible ,NA,2,mg/L
5 470,CP001172.2,Acinetobacter baumannii AB307-0294,Ampicillin,resistant,>=,0,mg/L 5 470,Acinetobacter baumannii AB307-0294,Ampicillin,resistant,>=,0,mg/L
6 470,CP001172.2,Acinetobacter baumannii AB307-0294,Ampicillin/sulbactam,susceptible,<=,mg/L,mg/L 6 470,Acinetobacter baumannii AB307-0294,Ampicillin/sulbactam,susceptible,<=,mg/L,mg/L
7 470,CP001172.2,Acinetobacter baumannii AB307-0294,piperacillin/tazobactam,susceptible,<=,0,mg/L 7 470,Acinetobacter baumannii AB307-0294,piperacillin/tazobactam,susceptible,<=,0,mg/L
8 470,CP001172.2,Acinetobacter baumannii AB307-0294,Cefazolin,resistant,>=,64,mg/L 8 470,Acinetobacter baumannii AB307-0294,Cefazolin,resistant,>=,64,mg/L
9 470,CP001172.2,Acinetobacter baumannii AB307-0294,Ceftriaxone,susceptible,==,16,mg/L 9 470,Acinetobacter baumannii AB307-0294,Ceftriaxone,susceptible,==,16,mg/L
10 470,CP001172.2,Acinetobacter baumannii AB307-0294,Cefepime,susceptible,==,8,mg/L 10 470,Acinetobacter baumannii AB307-0294,Cefepime,susceptible,==,8,mg/L
11 470,CP001172.2,Acinetobacter baumannii AB307-0294,Meropenem,susceptible,<=,0.25,mg/L 11 470,Acinetobacter baumannii AB307-0294,Meropenem,susceptible,<=,0.25,mg/L
12 470,CP001172.2,Acinetobacter baumannii AB307-0294,Imipenem,susceptible,<=,1,mg/L 12 470,Acinetobacter baumannii AB307-0294,Imipenem,susceptible,<=,1,mg/L
13 470,CP001172.2,Acinetobacter baumannii AB307-0294,Tigecycline,susceptible,<=,0.5,mg/L 13 470,Acinetobacter baumannii AB307-0294,Tigecycline,susceptible,<=,0.5,mg/L
14 470,CP008706.1,Acinetobacter baumannii AB5075-UW,Ceftazidime,Resistant,NA,>128,mg/L 14 470,Acinetobacter baumannii AB5075-UW,Ceftazidime,Resistant,NA,>128,mg/L
15 470,CP008706.1,Acinetobacter baumannii AB5075-UW,Cefepime,Resistant,NA,>256,mg/L 15 470,Acinetobacter baumannii AB5075-UW,Cefepime,Resistant,NA,>256,mg/L
16 470,CP008706.1,Acinetobacter baumannii AB5075-UW,Ciprofloxacin,Resistant,NA,>32,mg/L 16 470,Acinetobacter baumannii AB5075-UW,Ciprofloxacin,Resistant,NA,>32,mg/L
17 470,CP017152.1,Acinetobacter baumannii DU202,colistin ,Susceptible,NA,,mg/L 17 470,Acinetobacter baumannii DU202,colistin ,Susceptible,NA,,mg/L
18 470,CP017152.1,Acinetobacter baumannii DU202,trimethoprim/sulfamethoxazole,Resistant,NA,8/152,mg/L 18 470,Acinetobacter baumannii DU202,trimethoprim/sulfamethoxazole,Resistant,NA,8/152,mg/L
19 470,CP017152.1,Acinetobacter baumannii DU202,Ampicillin/sulbactam,Resistant,NA,>=0.3 mg/L,mg/L 19 470,Acinetobacter baumannii DU202,Ampicillin/sulbactam,Resistant,NA,>=0.3 mg/L,mg/L
20 470,CP017152.1,Acinetobacter baumannii DU202,ticarcillin/clavulanic acid,Resistant,NA,>=128/2,mg/L 20 470,Acinetobacter baumannii DU202,ticarcillin/clavulanic acid,Resistant,NA,>=128/2,mg/L
21 470,CP017152.1,Acinetobacter baumannii DU202,piperacillin/tazobactam ,Resistant,NA,NA,mg/L 21 470,Acinetobacter baumannii DU202,piperacillin/tazobactam ,Resistant,NA,NA,mg/L
22 470,CP017152.1,Acinetobacter baumannii DU202,trimethoprim/sulfamethoxazole,Resistant,NA,8/152,mg/L 22 470,Acinetobacter baumannii DU202,trimethoprim/sulfamethoxazole,Resistant,NA,8/152,mg/L
23 470,CP015483.1,Acinetobacter baumannii ORAB01,piperacillin/tazobactam,Resistant,NA,>64/4,mg/L 23 470,Acinetobacter baumannii ORAB01,piperacillin/tazobactam,Resistant,NA,>64/4,mg/L
24 470,470.7601,Acinetobacter baumannii strain MRSN7100,amoxicillin/clavulanic acid,Resistant,>, 16/8,mg/L 24 470,Acinetobacter baumannii strain MRSN7100,amoxicillin/clavulanic acid,Resistant,>, 16/8,mg/L
25 470,470.7651,Acinetobacter baumannii strain MRSN7168,amoxicillin/clavulanic acid,Resistant,>, 16/8,mg/L 25 470,Acinetobacter baumannii strain MRSN7168,amoxicillin/clavulanic acid,Resistant,>, 16/8,mg/L
26 470,470.7764,Acinetobacter baumannii strain MRSN7336,amoxicillin/clavulanic acid,Resistant,>, 16/8,mg/L 26 470,Acinetobacter baumannii strain MRSN7336,amoxicillin/clavulanic acid,Resistant,>, 16/8,mg/L
27 470,470.8071,Acinetobacter baumannii strain MRSN7834,amoxicillin/clavulanic acid,Resistant,>, 16/8,mg/L 27 470,Acinetobacter baumannii strain MRSN7834,amoxicillin/clavulanic acid,Resistant,>, 16/8,mg/L
28 470,470.7405,Acinetobacter baumannii strain FDA-CDC-AR_0305,polymyxin B,Susceptible,==,1,mg/L 28 470,Acinetobacter baumannii strain FDA-CDC-AR_0305,polymyxin B,Susceptible,==,1,mg/L
29 470,470.7406,Acinetobacter baumannii strain FDA-CDC-AR_0306,polymyxin B,Susceptible,==,1,mg/L 29 470,Acinetobacter baumannii strain FDA-CDC-AR_0306,polymyxin B,Susceptible,==,1,mg/L
30 470,470.7407,Acinetobacter baumannii strain FDA-CDC-AR_0307,polymyxin B,Resistant,==,8,mg/L 30 470,Acinetobacter baumannii strain FDA-CDC-AR_0307,polymyxin B,Resistant,==,8,mg/L
31 470,470.7408,Acinetobacter baumannii strain FDA-CDC-AR_0308,polymyxin B,Resistant,==,4,mg/L 31 470,Acinetobacter baumannii strain FDA-CDC-AR_0308,polymyxin B,Resistant,==,4,mg/L