comparison matchms_split.py @ 19:d5a50ec6035d draft default tip

planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/matchms commit a57d984a9850c1faa44b6948981eb1303881ba9c

18:081390a8e739

import argparse
import itertools
import os

import matchms
from matchms.exporting import save_as_msp
from matchms.importing import load_from_msp


matchms.Metadata.set_key_replacements({})


def make_outdir(outdir: str):
    """Create destination directory.

listarg = argparse.ArgumentParser()
listarg.add_argument('--filename', type=str)
listarg.add_argument('--method', type=str)
listarg.add_argument('--outdir', type=str)
listarg.add_argument('--parameter', type=int)
args = listarg.parse_args()
outdir = args.outdir
filename = args.filename
method = args.method
parameter = args.parameter

19:d5a50ec6035d

import argparse
import itertools
import os

from matchms import Metadata
from matchms.exporting import save_as_msp
from matchms.importing import load_from_msp

Metadata.set_key_replacements({})


def make_outdir(outdir: str):
    """Create destination directory.

listarg = argparse.ArgumentParser()
listarg.add_argument('--filename', type=str)
listarg.add_argument('--method', type=str)
listarg.add_argument('--outdir', type=str)
listarg.add_argument('--parameter', type=int, required=False)
args = listarg.parse_args()
outdir = args.outdir
filename = args.filename
method = args.method
parameter = args.parameter