Mercurial > repos > recetox > matchms_filtering
comparison matchms_filtering.xml @ 22:00e66c401366 draft default tip
planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/matchms commit 8db07edd3b0d2ff778036dec410027ad58365488
| author | recetox |
|---|---|
| date | Mon, 15 Jul 2024 08:00:24 +0000 |
| parents | 86d265d2a334 |
| children |
comparison
equal
deleted
inserted
replaced
| 21:07cac38cbd29 | 22:00e66c401366 |
|---|---|
| 1 <tool id="matchms_filtering" name="matchms filtering" version="@TOOL_VERSION@+galaxy1" profile="21.09"> | 1 <tool id="matchms_filtering" name="matchms filtering" version="@TOOL_VERSION@+galaxy0" profile="21.09"> |
| 2 <description>filter and normalize mass spectrometry data</description> | 2 <description>filter and normalize mass spectrometry data</description> |
| 3 | 3 |
| 4 <macros> | 4 <macros> |
| 5 <import>macros.xml</import> | 5 <import>macros.xml</import> |
| 6 <import>help.xml</import> | 6 <import>help.xml</import> |
| 62 </configfiles> | 62 </configfiles> |
| 63 | 63 |
| 64 <inputs> | 64 <inputs> |
| 65 <param label="Spectra file" name="spectra" type="data" format="msp,mgf" help="Mass spectra file to be filtered." /> | 65 <param label="Spectra file" name="spectra" type="data" format="msp,mgf" help="Mass spectra file to be filtered." /> |
| 66 <param name="normalise_intensities_is_true" label="Normalize intensities" type="boolean" truevalue="TRUE" falsevalue="FALSE" checked="false" | 66 <param name="normalise_intensities_is_true" label="Normalize intensities" type="boolean" truevalue="TRUE" falsevalue="FALSE" checked="false" |
| 67 help="Normalize intensities of peaks (and losses) to unit height."/> | 67 help="Normalize intensities of peaks to unit height."/> |
| 68 <param name="default_filters_is_true" label="Apply default filters" type="boolean" truevalue="TRUE" falsevalue="FALSE" checked="false" | 68 <param name="default_filters_is_true" label="Apply default filters" type="boolean" truevalue="TRUE" falsevalue="FALSE" checked="false" |
| 69 help="Collection of filters that are considered default and that do no require any (factory) arguments."/> | 69 help="Collection of filters that are considered default and that do no require any (factory) arguments."/> |
| 70 <param name="clean_metadata_is_true" label="Clean metadata" type="boolean" truevalue="TRUE" falsevalue="FALSE" checked="false" | 70 <param name="clean_metadata_is_true" label="Clean metadata" type="boolean" truevalue="TRUE" falsevalue="FALSE" checked="false" |
| 71 help="Apply all adding and cleaning filters if possible, so that the spectra have canonical metadata." /> | 71 help="Apply all adding and cleaning filters if possible, so that the spectra have canonical metadata." /> |
| 72 | 72 |