comparison matchms_formatter.xml @ 3:574c6331e9db draft

planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/matchms commit 38a5028a7abe99794086e9b1374ab4bb8bfa68de

2:a5c84c9c1a28

<tool id="matchms_formatter" name="matchms output formatter" version="0.1.3" python_template_version="3.5">
    <description>reformat output tables of matchms</description>

    <macros>
        <import>macros.xml</import>
    </macros>

            #end if
        </configfile>
    </configfiles>

    <inputs>
        <param label="Scores Table" name="scores" type="data" format="csv,tabular,tsv" help="Scores output table." />
        <param label="Matches Table" name="matches" type="data" format="csv,tabular,tsv" help="Scores output table." />


        <conditional name="method">
            <param name="selection" type="select" label="Formatting method">
                <option value="get-thresholded-data" selected="true">Thresholding</option>

            </when>
        </conditional>

    </inputs>
    <outputs>
        <data label="${tool.name} (${method.selection}) on ${on_string}" name="output" format_source="scores"/>
    </outputs>

    <tests>
        <test>
            <param name="scores" value="scores_test2_out.tsv" ftype="tsv"/>

3:574c6331e9db

<tool id="matchms_formatter" name="matchms output formatter" version="0.1.4" python_template_version="3.5">
    <description>reformat output tables of matchms</description>

    <macros>
        <import>macros.xml</import>
    </macros>

            #end if
        </configfile>
    </configfiles>

    <inputs>
        <param label="Scores Table" name="scores" type="data" format="tsv" help="Scores output table." />
        <param label="Matches Table" name="matches" type="data" format="tsv" help="Scores output table." />


        <conditional name="method">
            <param name="selection" type="select" label="Formatting method">
                <option value="get-thresholded-data" selected="true">Thresholding</option>

            </when>
        </conditional>

    </inputs>
    <outputs>
        <data label="${tool.name} (${method.selection}) on ${on_string}" name="output" format="tsv"/>
    </outputs>

    <tests>
        <test>
            <param name="scores" value="scores_test2_out.tsv" ftype="tsv"/>