Mercurial > repos > recetox > matchms_formatter
comparison matchms_formatter.xml @ 17:b500419a2f1d draft
planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/matchms commit ad718c989f31829edc89e039e56644a95dab6791
| author | recetox |
|---|---|
| date | Fri, 01 Dec 2023 10:21:26 +0000 |
| parents | 1e58bf51a0e5 |
| children | 86a45ba3d3f2 |
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| 16:afc881c21a62 | 17:b500419a2f1d |
|---|---|
| 1 <tool id="matchms_formatter" name="matchms scores formatter" version="@TOOL_VERSION@+galaxy0" profile="21.09"> | 1 <tool id="matchms_formatter" name="matchms scores formatter" version="@TOOL_VERSION@+galaxy1" profile="21.09"> |
| 2 <description>reformat scores object of matchms to long format table</description> | 2 <description>reformat scores object of matchms to long format table</description> |
| 3 | 3 |
| 4 <macros> | 4 <macros> |
| 5 <import>macros.xml</import> | 5 <import>macros.xml</import> |
| 6 <import>help.xml</import> | 6 <import>help.xml</import> |
| 22 ]]></command> | 22 ]]></command> |
| 23 | 23 |
| 24 <environment_variables> | 24 <environment_variables> |
| 25 <environment_variable name="MPLCONFIGDIR">\$_GALAXY_JOB_TMP_DIR</environment_variable> | 25 <environment_variable name="MPLCONFIGDIR">\$_GALAXY_JOB_TMP_DIR</environment_variable> |
| 26 <environment_variable name="XDG_CACHE_HOME">\$_GALAXY_JOB_TMP_DIR</environment_variable> | 26 <environment_variable name="XDG_CACHE_HOME">\$_GALAXY_JOB_TMP_DIR</environment_variable> |
| 27 <environment_variable name="OPENBLAS_NUM_THREADS">1</environment_variable> | |
| 27 </environment_variables> | 28 </environment_variables> |
| 28 | 29 |
| 29 <configfiles> | 30 <configfiles> |
| 30 <configfile name="matchms_formatter_cli"> | 31 <configfile name="matchms_formatter_cli"> |
| 31 python3 ${__tool_directory__}/formatter.py \ | 32 python3 ${__tool_directory__}/formatter.py \ |