Mercurial > repos > recetox > mfassignr_kmdnoise
changeset 4:922f0b4507d2 draft
planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/mfassignr commit 4bd188e61f09431c0b7e73b35fb8ccf5ee7af6ac
| author | recetox |
|---|---|
| date | Mon, 21 Oct 2024 09:06:32 +0000 |
| parents | a9fba8378048 |
| children | 634ae07958a2 |
| files | macros.xml |
| diffstat | 1 files changed, 2 insertions(+), 4 deletions(-) [+] |
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--- a/macros.xml Mon Sep 16 09:07:19 2024 +0000 +++ b/macros.xml Mon Oct 21 09:06:32 2024 +0000 @@ -68,8 +68,7 @@ <xml name="snplot_param"> <param name="input_file" type="data" format="tabular" label="Input data" help= "Input data frame, first column is mass, second column is intensity"/> - <param name="cut" type="float" label="cut" value="0" - help= "A numeric value of the intensity cut value being investigated"/> + <expand macro="noise_threshold_params" /> <param name="mass" type="float" label="mass" value="300" help= "A numeric value setting a centerpoint to look at the mass spectrum"/> <param name="window_x" type="float" label="window.x" value="0.5" @@ -140,8 +139,7 @@ <xml name="isofiltr_param"> <param name="peaks" type="data" format="tabular" label="Input Peak Data" help="The input data frame containing abundance and peak mass."/> - <param name="SN" type="float" value="0" label="Signal-to-Noise Ratio" - help="Sets the noise cut for the data; peaks below this value will not be evaluated."/> + <expand macro="noise_threshold_params" /> <param name="Carbrat" type="float" value="60" min="5" label="Maximum 13C/12C Ratio" help="Sets the maximum allowed ratio for matching 13C isotopes."/> <param name="Sulfrat" type="float" value="30" label="Maximum 34S/32S Ratio"