diff test-data/Model_Parameter_JSON.json @ 0:0a0529822d91 draft default tip

planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/ms2deepscore commit 4bd610e0cbbcbed51a6bfb880179777fc8034fd6

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/Model_Parameter_JSON.json	Mon Sep 02 12:12:30 2024 +0000
@@ -0,0 +1,50 @@
+{
+    "base_dims": [
+        20,
+        20
+    ],
+    "embedding_dim": 15,
+    "ionisation_mode": "negative",
+    "train_binning_layer": false,
+    "train_binning_layer_group_size": 20,
+    "train_binning_layer_output_per_group": 2,
+    "dropout_rate": 0.0,
+    "learning_rate": 0.00025,
+    "epochs": 2,
+    "patience": 20,
+    "loss_function": "mse",
+    "weighting_factor": 0,
+    "model_file_name": "ms2deepscore_model.pt",
+    "history_plot_file_name": "history.svg",
+    "time_stamp": "2024_08_16_07_50_22",
+    "min_mz": 10,
+    "max_mz": 1000,
+    "mz_bin_width": 0.1,
+    "intensity_scaling": 0.5,
+    "additional_metadata": [],
+    "batch_size": 2,
+    "num_turns": 1,
+    "shuffle": true,
+    "use_fixed_set": false,
+    "average_pairs_per_bin": 2,
+    "max_pairs_per_bin": 100,
+    "same_prob_bins": [
+        [
+            0.0,
+            0.2
+        ],
+        [
+            0.2,
+            1.0
+        ]
+    ],
+    "include_diagonal": true,
+    "random_seed": 42,
+    "fingerprint_type": "daylight",
+    "fingerprint_nbits": 2048,
+    "augment_removal_max": 0.2,
+    "augment_removal_intensity": 0.2,
+    "augment_intensity": 0.2,
+    "augment_noise_max": 10,
+    "augment_noise_intensity": 0.02
+}
\ No newline at end of file