Mercurial > repos > recetox > ramclustr
comparison ramclustr.xml @ 3:2ec9253a647e draft
planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/ramclustr commit 8714723083359049eb1a715a946851e07f8a3a20
| author | recetox |
|---|---|
| date | Tue, 20 Sep 2022 14:43:56 +0000 |
| parents | 75dafb766417 |
| children | 050cfef6ba65 |
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| 2:75dafb766417 | 3:2ec9253a647e |
|---|---|
| 1 <tool id="ramclustr" name="RAMClustR" version="@TOOL_VERSION@+galaxy1"> | 1 <tool id="ramclustr" name="RAMClustR" version="@TOOL_VERSION@+galaxy2"> |
| 2 <description>A feature clustering algorithm for non-targeted mass spectrometric metabolomics data.</description> | 2 <description>A feature clustering algorithm for non-targeted mass spectrometric metabolomics data.</description> |
| 3 <macros> | 3 <macros> |
| 4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
| 5 </macros> | 5 </macros> |
| 6 <expand macro="creator"/> | 6 <expand macro="creator"/> |
| 127 <section name="normalisation"> | 127 <section name="normalisation"> |
| 128 <section name="normalisation_method"> | 128 <section name="normalisation_method"> |
| 129 <param name="batch_order_qc" value="test2_sample_metadata_xcms_2.csv" ftype="csv" /> | 129 <param name="batch_order_qc" value="test2_sample_metadata_xcms_2.csv" ftype="csv" /> |
| 130 </section> | 130 </section> |
| 131 </section> | 131 </section> |
| 132 <output name="mass_spectra_merged" file="test2_fill_xcms_2.msp" ftype="msp" compare="diff" lines_diff="10"/> | 132 <output name="mass_spectra_merged" file="test2_fill_xcms_2.msp" ftype="msp" compare="diff" lines_diff="20"/> |
| 133 <output name="spec_abundance" file="test2_spec_abundance_xcms_2.csv" ftype="csv" compare="sim_size" delta="100"/> | 133 <output name="spec_abundance" file="test2_spec_abundance_xcms_2.csv" ftype="csv" compare="sim_size" delta="100"/> |
| 134 </test> | 134 </test> |
| 135 <test><!-- TEST 3 --> | 135 <test><!-- TEST 3 --> |
| 136 <section name="filetype"> | 136 <section name="filetype"> |
| 137 <param name="type_choice" value="csv"/> | 137 <param name="type_choice" value="csv"/> |