Mercurial > repos > recetox > ramclustr
changeset 12:f52181a205d3 draft default tip
planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/ramclustr commit c562be4e9eb71470b480752aafe16722aee72bb1
| author | recetox |
|---|---|
| date | Thu, 19 Jun 2025 07:59:00 +0000 |
| parents | da7722f665f4 |
| children | |
| files | macros.xml ramclustr.xml test-data/test2_fill_xcms_2.msp test-data/test2_spec_abundance_xcms_2.tsv |
| diffstat | 4 files changed, 10364 insertions(+), 10147 deletions(-) [+] |
line wrap: on
line diff
--- a/macros.xml Thu May 30 14:52:11 2024 +0000 +++ b/macros.xml Thu Jun 19 07:59:00 2025 +0000 @@ -1,5 +1,5 @@ <macros> - <token name="@TOOL_VERSION@">1.3.0</token> + <token name="@TOOL_VERSION@">1.3.1</token> <xml name="creator"> <creator> @@ -59,10 +59,8 @@ </xml> <xml name="parameters_xcms"> - <section name="xcms" title="Input MS Data as XCMS" expanded="true"> - <param name="input_xcms" label="Input XCMS" type="data" format="rdata.xcms.fillpeaks" - help="Grouped feature data for clustering." /> - </section> + <param name="input_xcms" label="Input XCMS" type="data" format="rdata.xcms.fillpeaks,rdata.xcms.group" + help="Grouped feature data for clustering." /> </xml> <xml name="parameters_recetox_aplcms">
--- a/ramclustr.xml Thu May 30 14:52:11 2024 +0000 +++ b/ramclustr.xml Thu Jun 19 07:59:00 2025 +0000 @@ -1,4 +1,4 @@ -<tool id="ramclustr" name="RAMClustR" version="@TOOL_VERSION@+galaxy7" profile="21.09"> +<tool id="ramclustr" name="RAMClustR" version="@TOOL_VERSION@+galaxy0" profile="23.0"> <description>A feature clustering algorithm for non-targeted mass spectrometric metabolomics data.</description> <macros> <import>macros.xml</import> @@ -15,11 +15,11 @@ <requirements> <requirement type="package" version="@TOOL_VERSION@">r-ramclustr</requirement> - <requirement type="package" version="3.20.0">bioconductor-xcms</requirement> - <requirement type="package" version="9.0.0">r-arrow</requirement> + <requirement type="package" version="3.22.0">bioconductor-xcms</requirement> + <requirement type="package" version="19.0.1">r-arrow</requirement> </requirements> - <command detect_errors="exit_code"><