Mercurial > repos > recetox > recetox_aplcms_correct_time
diff recetox_aplcms_correct_time.xml @ 9:9064aecc78a7 draft default tip
planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/recetox_aplcms commit b88eaca14b030fc0023989f3c83479e4975d172a
author | recetox |
---|---|
date | Thu, 01 Aug 2024 10:58:09 +0000 |
parents | d69ec1171d71 |
children |
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--- a/recetox_aplcms_correct_time.xml Thu May 30 14:52:30 2024 +0000 +++ b/recetox_aplcms_correct_time.xml Thu Aug 01 10:58:09 2024 +0000 @@ -1,4 +1,4 @@ -<tool id="recetox_aplcms_correct_time" name="recetox-aplcms - correct time" version="@TOOL_VERSION@+galaxy3" profile="21.09"> +<tool id="recetox_aplcms_correct_time" name="recetox-aplcms - correct time" version="@TOOL_VERSION@+galaxy0" profile="21.09"> <description>correct retention time across samples for peak alignment</description> <macros> <import>macros.xml</import> @@ -28,9 +28,7 @@ corrected_table <- correct_time( this.feature = features_table, - template_features = template_features, - mz_tol_relative = $mz_tol_relative_ppm * 1e-06, - rt_tol_relative = $rt_tol + template_features = template_features ) corrected_table <- save_sample_name(corrected_table, sample_name) @@ -43,7 +41,6 @@ help="Mass spectrometry clustered features table." /> <param label="Input template features table" name="template" type="data" format="parquet" help="Template features table." /> - <expand macro="tolerances"/> </inputs> <outputs>