Mercurial > repos > recetox > recetox_aplcms_generate_feature_table
comparison macros.xml @ 9:b3413f335327 draft default tip
planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/recetox_aplcms commit b88eaca14b030fc0023989f3c83479e4975d172a
author | recetox |
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date | Thu, 01 Aug 2024 10:59:05 +0000 |
parents | 32b66fb6a6a0 |
children |
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8:6ba3526237e0 | 9:b3413f335327 |
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1 <macros> | 1 <macros> |
2 <token name="@TOOL_VERSION@">0.12.0</token> | 2 <token name="@TOOL_VERSION@">0.13.2</token> |
3 <xml name="requirements"> | 3 <xml name="requirements"> |
4 <requirements> | 4 <requirements> |
5 <requirement type="package" version="@TOOL_VERSION@">r-recetox-aplcms</requirement> | 5 <requirement type="package" version="@TOOL_VERSION@">r-recetox-aplcms</requirement> |
6 <requirement type="package" version="2.5.2">pymzml</requirement> | 6 <requirement type="package" version="2.5.2">pymzml</requirement> |
7 </requirements> | 7 </requirements> |
64 help="The m/z tolerance level for the grouping of data points. This value is expressed as the fraction of the m/z value. | 64 help="The m/z tolerance level for the grouping of data points. This value is expressed as the fraction of the m/z value. |
65 This value, multiplied by the m/z value, becomes the cutoff level. | 65 This value, multiplied by the m/z value, becomes the cutoff level. |
66 The recommended value is the machine's nominal accuracy level (e.g. for FTMS, it is 10)." /> | 66 The recommended value is the machine's nominal accuracy level (e.g. for FTMS, it is 10)." /> |
67 <param name="baseline_correct" type="float" value="0" label="Baseline correction [unit of signal intensity]" | 67 <param name="baseline_correct" type="float" value="0" label="Baseline correction [unit of signal intensity]" |
68 help="After grouping the observations, the highest intensity in each group is found. If the highest is lower than this value, the entire group will be deleted." /> | 68 help="After grouping the observations, the highest intensity in each group is found. If the highest is lower than this value, the entire group will be deleted." /> |
69 <param name="grouping_threshold" type="float" min="0" value="Inf" label="Grouping Threshold [unit corresponds to the retention time]" | |
70 help="Maximum empty space between section of the chromatogram for splitting EICs" /> | |
69 <param name="intensity_weighted" type="boolean" checked="false" truevalue="TRUE" falsevalue="FALSE" label="Weight intensity" | 71 <param name="intensity_weighted" type="boolean" checked="false" truevalue="TRUE" falsevalue="FALSE" label="Weight intensity" |
70 help="Whether to weight the local density by signal intensities in initial peak detection." /> | 72 help="Whether to weight the local density by signal intensities in initial peak detection." /> |
71 </xml> | 73 </xml> |
72 | 74 |
73 <xml name="generate_feature_table_params"> | 75 <xml name="generate_feature_table_params"> |