Mercurial > repos > recetox > recetox_aplcms_generate_feature_table
comparison utils.R @ 1:e8962c8340f4 draft
planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/recetox_aplcms commit 4254c6f6f05915ceab5af5d7040ac2c44a8364b4
author | recetox |
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date | Mon, 03 Apr 2023 14:57:14 +0000 |
parents | 2810c956ec39 |
children | 73d8537dcbd6 |
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0:2810c956ec39 | 1:e8962c8340f4 |
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121 if ((any(is.na(sample_names))) || (length(unique(sample_names)) != length(sample_names))) { | 121 if ((any(is.na(sample_names))) || (length(unique(sample_names)) != length(sample_names))) { |
122 stop(sprintf("Sample names absent or not unique - provided sample names: %s", | 122 stop(sprintf("Sample names absent or not unique - provided sample names: %s", |
123 paste(sample_names, collapse = ", "))) | 123 paste(sample_names, collapse = ", "))) |
124 } | 124 } |
125 } | 125 } |
126 | |
127 determine_sigma_ratios <- function(sigma_ratio_lim_min = NA, sigma_ratio_lim_max = NA) { | |
128 if (is.na(sigma_ratio_lim_min)) { | |
129 sigma_ratio_lim_min <- 0 | |
130 } | |
131 if (is.na(sigma_ratio_lim_max)) { | |
132 sigma_ratio_lim_max <- Inf | |
133 } | |
134 return(c(sigma_ratio_lim_min, sigma_ratio_lim_max)) | |
135 } |