Mercurial > repos > rhpvorderman > data_manager_select_index_by_path
comparison tool-data/bwameth_indexes.loc.sample @ 0:5f8d9309058b draft
planemo upload for repository https://github.com/LUMC/lumc-galaxy-tools/tree/master/data_manager_select_index_by_path commit b3f86a0c89c2956f40ee0d462cb31a60eb91724a
| author | rhpvorderman |
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| date | Mon, 25 Sep 2017 03:35:26 -0400 |
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| -1:000000000000 | 0:5f8d9309058b |
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| 1 # This is a sample file distributed with Galaxy that is used to define a | |
| 2 # list of bwa-meth indices, using three columns tab separated: | |
| 3 # | |
| 4 # <unique_build_id> <dbkey> <display_name> <genome_fasta_file_path> | |
| 5 # | |
| 6 # An index can be created with the following command: | |
| 7 # | |
| 8 # bwameth.py index /some/path/genome.fa | |
| 9 # | |
| 10 # "/some/path/genome.fa" would then be the last column in the line | |
| 11 # If this were for the mm10 mouse genome, the resulting entry would look like: | |
| 12 # | |
| 13 #mm9 mm9 Mouse (mm9) /some/path/genome.fa | |
| 14 # | |
| 15 # |