Mercurial > repos > richard-burhans > batched_lastz
comparison run_lastz_tarball.py @ 2:007990f98551 draft
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/batched_lastz commit 3bbc9b941798f866a1d8b7af1e3c0444e5130fd9
| author | richard-burhans |
|---|---|
| date | Wed, 01 May 2024 13:53:26 +0000 |
| parents | 103538753e81 |
| children | 34d51e66256c |
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| 1:ad3554614aad | 2:007990f98551 |
|---|---|
| 321 sys.exit("ERROR: extracting may be unsafe; consider updating Python") | 321 sys.exit("ERROR: extracting may be unsafe; consider updating Python") |
| 322 | 322 |
| 323 parser = argparse.ArgumentParser() | 323 parser = argparse.ArgumentParser() |
| 324 parser.add_argument("--input", type=str, required=True) | 324 parser.add_argument("--input", type=str, required=True) |
| 325 parser.add_argument("--output", type=str, required=True) | 325 parser.add_argument("--output", type=str, required=True) |
| 326 parser.add_argument("--parallel", type=int, default=1, required=False) | 326 parser.add_argument("--parallel", type=int, default=2, required=False) |
| 327 parser.add_argument("--debug", action="store_true", required=False) | 327 parser.add_argument("--debug", action="store_true", required=False) |
| 328 | 328 |
| 329 args = parser.parse_args() | 329 args = parser.parse_args() |
| 330 runner = TarRunner(args.input, args.output, args.parallel, args.debug) | 330 runner = TarRunner(args.input, args.output, args.parallel, args.debug) |
| 331 runner.run() | 331 runner.run() |