Mercurial > repos > richard-burhans > batched_lastz

changeset 14:43e72105f473 draft default tip

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planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/batched_lastz commit 646cb397d5219aba8b2eb365bef61195789e1d81
author richard-burhans
date Fri, 30 Aug 2024 15:32:44 +0000
parents 1aee697ec0fc
children
files batched_lastz.xml macros.xml
diffstat 2 files changed, 4 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/batched_lastz.xml	Mon Aug 19 19:42:23 2024 +0000
+++ b/batched_lastz.xml	Fri Aug 30 15:32:44 2024 +0000
@@ -26,17 +26,17 @@
       </test>
     </tests>
     <help><![CDATA[
-Batched LASTZ is a special version of LASTZ designed to process output of Galaxy's SegAlign tool. It outputs pairiwse alignments in a verietry of formats.
+Batched LASTZ is a special version of LASTZ designed to process output of Galaxy's KegAlign tool. It outputs pairiwse alignments in a verietry of formats.
 
 **Using this tool**
 
 .. class:: warningmark
 
-This tool is the second part of a two-step process for generation of paiwrise alignments. The output of this tool is alignments in a format that was specified in **Output Options** section of SegAlign tool.
+This tool is the second part of a two-step process for generation of paiwrise alignments. The output of this tool is alignments in a format that was specified in **Output Options** section of KegAlign tool.
 
 **What it does**
 
-SegAlign processes **Target** and **Query** sequences to identify highly similar regions where gapped extension will be performed to create actual alignments. The actual alignments are generated by **Batched LASTZ** that should be run on the output of this tool. 
+KegAlign processes **Target** and **Query** sequences to identify highly similar regions where gapped extension will be performed to create actual alignments. The actual alignments are generated by **Batched LASTZ** that should be run on the output of this tool. 
 
 The default output is a MAF alignment file. Other formats can be configured in *Output Options* section.  See LASTZ manual <https://lastz.github.io/lastz/#formats>`_ for description of possible formats.
     ]]></help>
--- a/macros.xml	Mon Aug 19 19:42:23 2024 +0000
+++ b/macros.xml	Fri Aug 30 15:32:44 2024 +0000
@@ -6,7 +6,7 @@
         </requirements>
     </xml>
     <token name="@TOOL_VERSION@">1.04.22</token>
-    <token name="@VERSION_SUFFIX@">3</token>
+    <token name="@VERSION_SUFFIX@">4</token>
     <token name="@PROFILE@">21.05</token>
     <xml name="citations">
         <citations>