annotate serve.log @ 0:d55ad8533d58 draft default tip

planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/ncbi_fcs_adaptor commit 74ccb005520db16be005e6471e8624357aca7d94

Created directory for Galaxy configuration [/tmp/tmpqrlh6ih1]
Writing dependency_resolvers_config_file to path /tmp/tmpqrlh6ih1/resolvers_conf.xml with contents [<dependency_resolvers>
  <tool_shed_packages />
  <conda auto_init="True" auto_install="True" ensure_channels="conda-forge,bioconda,defaults" prefix="/afs/bx.psu.edu/home/rico/miniconda3" condarc_override="/scratch/rico/.planemo/condarc" />
  <conda versionless="true" auto_init="True" auto_install="True" ensure_channels="conda-forge,bioconda,defaults" prefix="/afs/bx.psu.edu/home/rico/miniconda3" condarc_override="/scratch/rico/.planemo/condarc" />
</dependency_resolvers>
]
Writing tool_conf to path /tmp/tmpqrlh6ih1/tool_conf.xml with contents [<toolbox>
  <tool file="data_source/upload.xml" />
  <tool file="/scratch/rico/galaxytools/tools/ncbi_fcs_adaptor/ncbi_fcs_adaptor.xml" />
</toolbox>
]
Starting Galaxy with command [cd /scratch/rico/galaxy && if [ -d .venv ]; then GALAXY_VIRTUAL_ENV=.venv; else GALAXY_VIRTUAL_ENV=/scratch/rico/.planemo/gx_venv_3; fi && export GALAXY_VIRTUAL_ENV && echo "Set \$GALAXY_VIRTUAL_ENV to $GALAXY_VIRTUAL_ENV" && if [ -e "$GALAXY_VIRTUAL_ENV" ]; then echo "Virtual environment directory exists."; else echo "Virtual environment directory does not exist."; fi && if [ ! -e "$GALAXY_VIRTUAL_ENV" ]; then /scratch/rico/.venv/bin/virtualenv $GALAXY_VIRTUAL_ENV -p /scratch/rico/.venv/bin/python3; echo "Created virtualenv"; fi && echo "Set \$GALAXY_VIRTUAL_ENV to $GALAXY_VIRTUAL_ENV" && if [ -e "$GALAXY_VIRTUAL_ENV" ]; then echo "Virtual environment directory exists."; else echo "Virtual environment directory does not exist."; fi && if [ -e "$GALAXY_VIRTUAL_ENV" ]; then . "$GALAXY_VIRTUAL_ENV"/bin/activate; echo "Activated a virtualenv for Galaxy"; echo "$VIRTUAL_ENV"; else echo "Failed to activate virtualenv."; fi && bash -c 'pwd' && bash -c 'which python' && bash -c 'which pip' && bash -c 'echo $GALAXY_VIRTUAL_ENV' && bash -c 'echo $VIRTUAL_ENV' && bash -c 'ls -a' && /scratch/rico/galaxy/run.sh $COMMON_STARTUP_ARGS --server-name main]
With environment variables:
============================
GALAXY_CONFIG_OVERRIDE_MASTER_API_KEY="test_key"
GALAXY_CONFIG_OVERRIDE_ADMIN_USERS="[e-mail],[e-mail]"
GALAXY_CONFIG_OVERRIDE_EXPOSE_DATASET_PATH="True"
GALAXY_CONFIG_OVERRIDE_COLLECT_OUTPUTS_FROM="job_working_directory"
GALAXY_CONFIG_OVERRIDE_ALLOW_PATH_PASTE="True"
GALAXY_CONFIG_OVERRIDE_CHECK_MIGRATE_TOOLS="False"
GALAXY_CONFIG_OVERRIDE_USE_CACHED_DEPENDENCY_MANAGER="True"
GALAXY_CONFIG_OVERRIDE_BRAND="Configured by Planemo"
GALAXY_CONFIG_OVERRIDE_STRICT_CWL_VALIDATION="True"
GALAXY_CONFIG_OVERRIDE_CLEANUP_JOB="never"
GALAXY_CONFIG_OVERRIDE_SINGLE_USER="[e-mail]"
GALAXY_CONFIG_OVERRIDE_SERVER_NAME="main"
GALAXY_CONFIG_OVERRIDE_FTP_UPLOAD_DIR_TEMPLATE="${ftp_upload_dir}"
GALAXY_CONFIG_OVERRIDE_FTP_UPLOAD_PURGE="False"
GALAXY_CONFIG_OVERRIDE_FTP_UPLOAD_DIR="/scratch/rico/galaxytools/tools/ncbi_fcs_adaptor/test-data"
GALAXY_CONFIG_OVERRIDE_FTP_UPLOAD_SITE="Test Data"
GALAXY_CONFIG_OVERRIDE_CHECK_UPLOAD_CONTENT="False"
GALAXY_CONFIG_OVERRIDE_TOOL_DEPENDENCY_DIR="/tmp/tmpqrlh6ih1/deps"
GALAXY_CONFIG_OVERRIDE_FILE_PATH="/tmp/tmpqrlh6ih1/files"
GALAXY_CONFIG_OVERRIDE_NEW_FILE_PATH="/tmp/tmpqrlh6ih1/tmp"
GALAXY_CONFIG_OVERRIDE_TOOL_CONFIG_FILE="/tmp/tmpqrlh6ih1/tool_conf.xml,/tmp/tmpqrlh6ih1/shed_tools_conf.xml"
GALAXY_CONFIG_OVERRIDE_TOOL_SHEDS_CONFIG_FILE="/tmp/tmpqrlh6ih1/tool_sheds_conf.xml"
GALAXY_CONFIG_OVERRIDE_MANAGE_DEPENDENCY_RELATIONSHIPS="False"
GALAXY_CONFIG_OVERRIDE_JOB_WORKING_DIRECTORY="/tmp/tmpqrlh6ih1/job_working_directory"
GALAXY_CONFIG_OVERRIDE_TEMPLATE_CACHE_PATH="/tmp/tmpqrlh6ih1/compiled_templates"
GALAXY_CONFIG_OVERRIDE_CITATION_CACHE_TYPE="file"
GALAXY_CONFIG_OVERRIDE_CITATION_CACHE_DATA_DIR="/tmp/tmpqrlh6ih1/citations/data"
GALAXY_CONFIG_OVERRIDE_CITATION_CACHE_LOCK_DIR="/tmp/tmpqrlh6ih1/citations/lock"
GALAXY_CONFIG_OVERRIDE_DATABASE_AUTO_MIGRATE="True"
GALAXY_CONFIG_OVERRIDE_ENABLE_BETA_TOOL_FORMATS="True"
GALAXY_CONFIG_OVERRIDE_ID_SECRET="f6141d9059f331976b6b66b722a14f48"
GALAXY_CONFIG_OVERRIDE_LOG_LEVEL="DEBUG"
GALAXY_CONFIG_OVERRIDE_DEBUG="true"
GALAXY_CONFIG_OVERRIDE_WATCH_TOOLS="auto"
GALAXY_CONFIG_OVERRIDE_DEFAULT_JOB_SHELL="/bin/bash"
GALAXY_CONFIG_OVERRIDE_INTEGRATED_TOOL_PANEL_CONFIG="/tmp/tmpqrlh6ih1/integrated_tool_panel_conf.xml"
GALAXY_CONFIG_OVERRIDE_MIGRATED_TOOLS_CONFIG="/tmp/tmpqrlh6ih1/empty_tool_conf.xml"
GALAXY_CONFIG_OVERRIDE_TEST_DATA_DIR="/scratch/rico/galaxytools/tools/ncbi_fcs_adaptor/test-data"
GALAXY_CONFIG_OVERRIDE_SHED_DATA_MANAGER_CONFIG_FILE="/tmp/tmpqrlh6ih1/shed_data_manager_conf.xml"
GALAXY_CONFIG_OVERRIDE_OUTPUTS_TO_WORKING_DIRECTORY="True"
GALAXY_CONFIG_OVERRIDE_OBJECT_STORE_STORE_BY="uuid"
GALAXY_CONFIG_OVERRIDE_DATABASE_CONNECTION="sqlite:////tmp/tmpqrlh6ih1/galaxy.sqlite?isolation_level=IMMEDIATE"
GALAXY_CONFIG_OVERRIDE_JOB_CONFIG_FILE="/scratch/rico/galaxytools/tools/ncbi_fcs_adaptor/planemo_job_conf.xml"
GALAXY_CONFIG_OVERRIDE_JOB_METRICS_CONFIG_FILE="/tmp/tmpqrlh6ih1/job_metrics_conf.xml"
GALAXY_CONFIG_OVERRIDE_DEPENDENCY_RESOLVERS_CONFIG_FILE="/tmp/tmpqrlh6ih1/resolvers_conf.xml"
GALAXY_DEVELOPMENT_ENVIRONMENT="1"
GALAXY_LOG="main.log"
GALAXY_PID="main.pid"
GALAXY_CONFIG_FILE="/tmp/tmpqrlh6ih1/galaxy.yml"
GRAVITY_STATE_DIR="/tmp/tmpqrlh6ih1/gravity"
SUPERVISORD_SOCKET="/tmp/tmpwpqnbgo4.sock"
============================
galaxy.util.commands WARNING 2024-02-23 14:19:34,170: Passing program arguments as a string may be a security hazard if combined with untrusted input
Set $GALAXY_VIRTUAL_ENV to /scratch/rico/.planemo/gx_venv_3
Virtual environment directory does not exist.
created virtual environment CPython3.7.3.final.0-64 in 1093ms
  creator CPython3Posix(dest=/scratch/rico/.planemo/gx_venv_3, clear=False, no_vcs_ignore=False, global=False)
  seeder FromAppData(download=False, pip=bundle, setuptools=bundle, wheel=bundle, via=copy, app_data_dir=/afs/bx.psu.edu/home/rico/.local/share/virtualenv)
    added seed packages: pip==23.3.2, setuptools==68.0.0, wheel==0.42.0
  activators BashActivator,CShellActivator,FishActivator,NushellActivator,PowerShellActivator,PythonActivator
Created virtualenv
Set $GALAXY_VIRTUAL_ENV to /scratch/rico/.planemo/gx_venv_3
Virtual environment directory exists.
Activated a virtualenv for Galaxy
/scratch/rico/.planemo/gx_venv_3
/scratch/rico/galaxy
/scratch/rico/.planemo/gx_venv_3/bin/python
/scratch/rico/.planemo/gx_venv_3/bin/pip
/scratch/rico/.planemo/gx_venv_3
/scratch/rico/.planemo/gx_venv_3
.
..
check_model.sh
.ci
.circleci
CITATION
client
CODE_OF_CONDUCT.md
config
contrib
CONTRIBUTING.md
CONTRIBUTORS.md
.coveragerc
cron
database
doc
.dockerignore
extract_dataset_parts.sh
.flake8
.git
.gitattributes
.git-blame-ignore-revs
.github
.gitignore
.gitpod.yml
hooks
.isort.cfg
.k8s_ci.Dockerfile
lib
LICENSE.txt
main.log
Makefile
manage_db.sh
manage_toolshed_db.sh
mypy.ini
package.json
packages
.pre-commit-config.yaml.sample
pyproject.toml
pytest.ini
README.rst
.redocly.lint-ignore.yaml
.redocly.yaml
requirements.txt
rolling_restart.sh
run_reports.sh
run.sh
run_tests.sh
run_tool_shed.sh
scripts
SECURITY.md
static
templates
test
test-data
tool-data
tools
tox.ini
tsconfig.json
.vscode
Activating virtualenv at /scratch/rico/.planemo/gx_venv_3
Requirement already satisfied: pip>=20.3 in /scratch/rico/.planemo/gx_venv_3/lib/python3.7/site-packages (23.3.2)
Requirement already satisfied: wheel in /scratch/rico/.planemo/gx_venv_3/lib/python3.7/site-packages (0.42.0)

[notice] A new release of pip is available: 23.3.2 -> 24.0
[notice] To update, run: pip install --upgrade pip
Looking in indexes: https://wheels.galaxyproject.org/simple, https://pypi.python.org/simple
Ignoring billiard: markers 'python_version >= "3.8" and python_version < "3.12"' don't match your environment
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Ignoring pyreadline3: markers 'sys_platform == "win32" and python_version >= "3.8" and python_version < "3.12"' don't match your environment
Ignoring pyreadline: markers 'sys_platform == "win32" and python_version < "3.8" and python_version >= "3.7"' don't match your environment
Ignoring tzdata: markers 'python_version >= "3.7" and python_version < "3.12" and platform_system == "Windows"' don't match your environment
Collecting a2wsgi==1.7.0 (from -r requirements.txt (line 1))
  Using cached a2wsgi-1.7.0-py3-none-any.whl.metadata (1.6 kB)
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  Using cached aiohttp-3.8.6-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (7.7 kB)
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Collecting graphene-sqlalchemy==3.0.0b3 (from -r requirements.txt (line 79))
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Collecting graphene==3.3 (from -r requirements.txt (line 80))
  Using cached graphene-3.3-py2.py3-none-any.whl.metadata (7.7 kB)
Collecting graphql-core==3.2.3 (from -r requirements.txt (line 81))
  Using cached graphql_core-3.2.3-py3-none-any.whl.metadata (10 kB)
Collecting graphql-relay==3.2.0 (from -r requirements.txt (line 82))
  Using cached graphql_relay-3.2.0-py3-none-any.whl.metadata (12 kB)
Collecting gravity==1.0.4 (from -r requirements.txt (line 83))
  Using cached gravity-1.0.4-py3-none-any.whl.metadata (14 kB)
Collecting greenlet==2.0.2 (from -r requirements.txt (line 84))
  Using cached greenlet-2.0.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (4.1 kB)
Collecting gunicorn==21.2.0 (from -r requirements.txt (line 85))
  Using cached gunicorn-21.2.0-py3-none-any.whl.metadata (4.1 kB)
Collecting gxformat2==0.18.0 (from -r requirements.txt (line 86))
  Using cached gxformat2-0.18.0-py2.py3-none-any.whl.metadata (11 kB)
Collecting h11==0.14.0 (from -r requirements.txt (line 87))
  Using cached h11-0.14.0-py3-none-any.whl.metadata (8.2 kB)
Collecting h5grove==1.3.0 (from -r requirements.txt (line 88))
  Using cached h5grove-1.3.0-py3-none-any.whl.metadata (3.4 kB)
Collecting h5py==3.8.0 (from -r requirements.txt (line 89))
  Using cached h5py-3.8.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.5 kB)
Collecting humanfriendly==10.0 (from -r requirements.txt (line 90))
  Using cached humanfriendly-10.0-py2.py3-none-any.whl (86 kB)
Collecting idna==3.5 (from -r requirements.txt (line 91))
  Using cached idna-3.5-py3-none-any.whl.metadata (9.9 kB)
Collecting importlib-metadata==4.13.0 (from -r requirements.txt (line 92))
  Using cached importlib_metadata-4.13.0-py3-none-any.whl.metadata (4.9 kB)
Collecting importlib-resources==5.12.0 (from -r requirements.txt (line 93))
  Using cached importlib_resources-5.12.0-py3-none-any.whl.metadata (4.1 kB)
Collecting isa-rwval==0.10.10 (from -r requirements.txt (line 94))
  Using cached isa_rwval-0.10.10-py2.py3-none-any.whl (50 kB)
Collecting isal==1.3.0 (from -r requirements.txt (line 95))
  Using cached isal-1.3.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (8.7 kB)
Collecting isodate==0.6.1 (from -r requirements.txt (line 96))
  Using cached isodate-0.6.1-py2.py3-none-any.whl (41 kB)
Collecting jinja2==3.1.2 (from -r requirements.txt (line 97))
  Using cached Jinja2-3.1.2-py3-none-any.whl.metadata (3.5 kB)
Collecting jmespath==1.0.1 (from -r requirements.txt (line 98))
  Using cached jmespath-1.0.1-py3-none-any.whl.metadata (7.6 kB)
Collecting jsonref==1.1.0 (from -r requirements.txt (line 99))
  Using cached jsonref-1.1.0-py3-none-any.whl.metadata (2.7 kB)
Collecting jsonschema==4.17.3 (from -r requirements.txt (line 100))
  Using cached jsonschema-4.17.3-py3-none-any.whl.metadata (7.9 kB)
Collecting kombu==5.2.4 (from -r requirements.txt (line 101))
  Using cached kombu-5.2.4-py3-none-any.whl.metadata (2.7 kB)
Collecting lagom==2.6.0 (from -r requirements.txt (line 103))
  Using cached lagom-2.6.0-py3-none-any.whl.metadata (6.6 kB)
Collecting lxml==4.9.3 (from -r requirements.txt (line 104))
  Using cached lxml-4.9.3-cp37-cp37m-manylinux_2_28_x86_64.whl.metadata (3.8 kB)
Collecting mako==1.2.4 (from -r requirements.txt (line 105))
  Using cached Mako-1.2.4-py3-none-any.whl.metadata (2.9 kB)
Collecting markdown-it-py==2.2.0 (from -r requirements.txt (line 106))
  Using cached markdown_it_py-2.2.0-py3-none-any.whl.metadata (6.8 kB)
Collecting markdown==3.4.4 (from -r requirements.txt (line 107))
  Using cached Markdown-3.4.4-py3-none-any.whl.metadata (6.9 kB)
Collecting markupsafe==2.1.3 (from -r requirements.txt (line 108))
  Using cached MarkupSafe-2.1.3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.0 kB)
Collecting mdurl==0.1.2 (from -r requirements.txt (line 109))
  Using cached mdurl-0.1.2-py3-none-any.whl.metadata (1.6 kB)
Collecting mercurial==6.6 (from -r requirements.txt (line 110))
  Using cached https://wheels.galaxyproject.org/simple/mercurial/mercurial-6.6-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (5.2 MB)
Collecting mistune==2.0.5 (from -r requirements.txt (line 111))
  Using cached mistune-2.0.5-py2.py3-none-any.whl.metadata (1.5 kB)
Collecting mrcfile==1.4.3 (from -r requirements.txt (line 112))
  Using cached mrcfile-1.4.3-py2.py3-none-any.whl.metadata (6.8 kB)
Collecting msal==1.25.0 (from -r requirements.txt (line 113))
  Using cached msal-1.25.0-py2.py3-none-any.whl.metadata (11 kB)
Collecting msgpack==1.0.5 (from -r requirements.txt (line 114))
  Using cached msgpack-1.0.5-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (8.8 kB)
Collecting multidict==6.0.4 (from -r requirements.txt (line 115))
  Using cached multidict-6.0.4-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (4.1 kB)
Collecting mypy-extensions==1.0.0 (from -r requirements.txt (line 116))
  Using cached mypy_extensions-1.0.0-py3-none-any.whl.metadata (1.1 kB)
Collecting networkx==2.5 (from -r requirements.txt (line 117))
  Using cached networkx-2.5-py3-none-any.whl (1.6 MB)
Collecting nodeenv==1.8.0 (from -r requirements.txt (line 118))
  Using cached nodeenv-1.8.0-py2.py3-none-any.whl.metadata (21 kB)
Collecting numpy==1.21.6 (from -r requirements.txt (line 119))
  Using cached numpy-1.21.6-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl.metadata (2.1 kB)
Collecting oauthlib==3.2.2 (from -r requirements.txt (line 122))
  Using cached oauthlib-3.2.2-py3-none-any.whl.metadata (7.5 kB)
Collecting orjson==3.9.7 (from -r requirements.txt (line 123))
  Using cached orjson-3.9.7-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (49 kB)
Collecting oyaml==1.0 (from -r requirements.txt (line 124))
  Using cached oyaml-1.0-py2.py3-none-any.whl (3.0 kB)
Collecting packaging==23.2 (from -r requirements.txt (line 125))
  Using cached packaging-23.2-py3-none-any.whl.metadata (3.2 kB)
Collecting paramiko==3.3.1 (from -r requirements.txt (line 126))
  Using cached paramiko-3.3.1-py3-none-any.whl.metadata (4.4 kB)
Collecting parsley==1.3 (from -r requirements.txt (line 127))
  Using cached Parsley-1.3-py2.py3-none-any.whl (88 kB)
Collecting paste==3.7.1 (from -r requirements.txt (line 128))
  Using cached Paste-3.7.1-py3-none-any.whl.metadata (4.9 kB)
Collecting pastedeploy==3.1.0 (from -r requirements.txt (line 129))
  Using cached PasteDeploy-3.1.0-py3-none-any.whl.metadata (2.7 kB)
Collecting pebble==5.0.4 (from -r requirements.txt (line 130))
  Using cached Pebble-5.0.4-py3-none-any.whl.metadata (3.6 kB)
Collecting pkgutil-resolve-name==1.3.10 (from -r requirements.txt (line 131))
  Using cached pkgutil_resolve_name-1.3.10-py3-none-any.whl (4.7 kB)
Collecting promise==2.3 (from -r requirements.txt (line 132))
  Using cached promise-2.3-py3-none-any.whl
Collecting prompt-toolkit==3.0.41 (from -r requirements.txt (line 133))
  Using cached prompt_toolkit-3.0.41-py3-none-any.whl.metadata (6.5 kB)
Collecting prov==1.5.1 (from -r requirements.txt (line 134))
  Using cached prov-1.5.1-py2.py3-none-any.whl (426 kB)
Collecting psutil==5.9.6 (from -r requirements.txt (line 135))
  Using cached psutil-5.9.6-cp36-abi3-manylinux_2_12_x86_64.manylinux2010_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (21 kB)
Collecting pulsar-galaxy-lib==0.15.5 (from -r requirements.txt (line 136))
  Using cached pulsar_galaxy_lib-0.15.5-py2.py3-none-any.whl.metadata (33 kB)
Collecting pyasn1==0.5.1 (from -r requirements.txt (line 137))
  Using cached pyasn1-0.5.1-py2.py3-none-any.whl.metadata (8.6 kB)
Collecting pycparser==2.21 (from -r requirements.txt (line 138))
  Using cached pycparser-2.21-py2.py3-none-any.whl (118 kB)
Collecting pycryptodome==3.19.0 (from -r requirements.txt (line 139))
  Using cached pycryptodome-3.19.0-cp35-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.4 kB)
Collecting pydantic-tes==0.1.5 (from -r requirements.txt (line 140))
  Using cached pydantic_tes-0.1.5-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting pydantic==1.10.13 (from -r requirements.txt (line 141))
  Using cached pydantic-1.10.13-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (149 kB)
Collecting pydot==1.4.2 (from -r requirements.txt (line 143))
  Using cached pydot-1.4.2-py2.py3-none-any.whl (21 kB)
Collecting pyeventsystem==0.1.0 (from -r requirements.txt (line 144))
  Using cached pyeventsystem-0.1.0-py2.py3-none-any.whl (15 kB)
Collecting pyfaidx==0.7.2.2 (from -r requirements.txt (line 145))
  Using cached pyfaidx-0.7.2.2-py3-none-any.whl.metadata (25 kB)
Collecting pygments==2.17.2 (from -r requirements.txt (line 146))
  Using cached pygments-2.17.2-py3-none-any.whl.metadata (2.6 kB)
Collecting pyjwt==2.8.0 (from -r requirements.txt (line 147))
  Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB)
Collecting pykwalify==1.8.0 (from -r requirements.txt (line 149))
  Using cached pykwalify-1.8.0-py2.py3-none-any.whl (24 kB)
Collecting pylibmagic==0.5.0 (from -r requirements.txt (line 150))
  Using cached pylibmagic-0.5.0-py3-none-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (5.5 kB)
Collecting pynacl==1.5.0 (from -r requirements.txt (line 151))
  Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB)
Collecting pyparsing==3.0.9 (from -r requirements.txt (line 152))
  Using cached pyparsing-3.0.9-py3-none-any.whl.metadata (4.2 kB)
Collecting pyrsistent==0.19.3 (from -r requirements.txt (line 155))
  Using cached pyrsistent-0.19.3-py3-none-any.whl.metadata (27 kB)
Collecting pysam==0.22.0 (from -r requirements.txt (line 156))
  Using cached pysam-0.22.0-cp37-cp37m-manylinux_2_28_x86_64.whl.metadata (1.5 kB)
Collecting python-dateutil==2.8.2 (from -r requirements.txt (line 157))
  Using cached python_dateutil-2.8.2-py2.py3-none-any.whl (247 kB)
Collecting python-jose==3.3.0 (from -r requirements.txt (line 158))
  Using cached python_jose-3.3.0-py2.py3-none-any.whl (33 kB)
Collecting python-magic==0.4.27 (from -r requirements.txt (line 159))
  Using cached python_magic-0.4.27-py2.py3-none-any.whl.metadata (5.8 kB)
Collecting python-multipart==0.0.7 (from -r requirements.txt (line 160))
  Using cached python_multipart-0.0.7-py3-none-any.whl.metadata (2.5 kB)
Collecting python3-openid==3.2.0 (from -r requirements.txt (line 161))
  Using cached python3_openid-3.2.0-py3-none-any.whl (133 kB)
Collecting pytz==2023.3.post1 (from -r requirements.txt (line 162))
  Using cached pytz-2023.3.post1-py2.py3-none-any.whl.metadata (22 kB)
Collecting pyyaml==6.0.1 (from -r requirements.txt (line 163))
  Using cached PyYAML-6.0.1-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
Collecting pyzmq==25.1.1 (from -r requirements.txt (line 164))
  Using cached pyzmq-25.1.1-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (4.9 kB)
Collecting rdflib==6.2.0 (from -r requirements.txt (line 165))
  Using cached rdflib-6.2.0-py3-none-any.whl.metadata (10 kB)
Collecting refgenconf==0.12.2 (from -r requirements.txt (line 166))
  Using cached refgenconf-0.12.2-py3-none-any.whl (72 kB)
Collecting regex==2023.10.3 (from -r requirements.txt (line 167))
  Using cached regex-2023.10.3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (40 kB)
Collecting repoze-lru==0.7 (from -r requirements.txt (line 168))
  Using cached repoze.lru-0.7-py3-none-any.whl (10 kB)
Collecting requests-oauthlib==1.3.1 (from -r requirements.txt (line 169))
  Using cached requests_oauthlib-1.3.1-py2.py3-none-any.whl.metadata (10 kB)
Collecting requests-toolbelt==1.0.0 (from -r requirements.txt (line 170))
  Using cached requests_toolbelt-1.0.0-py2.py3-none-any.whl.metadata (14 kB)
Collecting requests-unixsocket==0.3.0 (from -r requirements.txt (line 171))
  Using cached requests_unixsocket-0.3.0-py2.py3-none-any.whl (11 kB)
Collecting requests==2.31.0 (from -r requirements.txt (line 172))
  Using cached requests-2.31.0-py3-none-any.whl.metadata (4.6 kB)
Collecting rich==13.7.0 (from -r requirements.txt (line 173))
  Using cached rich-13.7.0-py3-none-any.whl.metadata (18 kB)
Collecting rocrate==0.9.0 (from -r requirements.txt (line 174))
  Using cached rocrate-0.9.0-py3-none-any.whl.metadata (15 kB)
Collecting routes==2.5.1 (from -r requirements.txt (line 175))
  Using cached Routes-2.5.1-py2.py3-none-any.whl (40 kB)
Collecting rsa==4.9 (from -r requirements.txt (line 176))
  Using cached rsa-4.9-py3-none-any.whl.metadata (4.2 kB)
Collecting ruamel-yaml-clib==0.2.8 (from -r requirements.txt (line 177))
  Using cached ruamel.yaml.clib-0.2.8-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB)
Collecting ruamel-yaml==0.17.21 (from -r requirements.txt (line 178))
  Using cached ruamel.yaml-0.17.21-py3-none-any.whl.metadata (13 kB)
Collecting s3fs==2023.1.0 (from -r requirements.txt (line 179))
  Using cached s3fs-2023.1.0-py3-none-any.whl.metadata (1.5 kB)
Collecting schema-salad==8.4.20230808163024 (from -r requirements.txt (line 180))
  Using cached schema_salad-8.4.20230808163024-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_28_x86_64.whl.metadata (16 kB)
Collecting setuptools-scm==5.0.2 (from -r requirements.txt (line 181))
  Using cached setuptools_scm-5.0.2-py2.py3-none-any.whl (29 kB)
Requirement already satisfied: setuptools==68.0.0 in /scratch/rico/.planemo/gx_venv_3/lib/python3.7/site-packages (from -r requirements.txt (line 182)) (68.0.0)
Collecting shellescape==3.8.1 (from -r requirements.txt (line 183))
  Using cached shellescape-3.8.1-py2.py3-none-any.whl (3.1 kB)
Collecting six==1.16.0 (from -r requirements.txt (line 184))
  Using cached six-1.16.0-py2.py3-none-any.whl (11 kB)
Collecting sniffio==1.3.0 (from -r requirements.txt (line 185))
  Using cached sniffio-1.3.0-py3-none-any.whl.metadata (3.6 kB)
Collecting social-auth-core==4.0.3 (from social-auth-core[openidconnect]==4.0.3->-r requirements.txt (line 186))
  Using cached social_auth_core-4.0.3-py3-none-any.whl (328 kB)
Collecting sortedcontainers==2.4.0 (from -r requirements.txt (line 187))
  Using cached sortedcontainers-2.4.0-py2.py3-none-any.whl (29 kB)
Collecting sqlalchemy==1.4.50 (from -r requirements.txt (line 188))
  Using cached SQLAlchemy-1.4.50-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (10.0 kB)
Collecting sqlitedict==2.1.0 (from -r requirements.txt (line 189))
  Using cached sqlitedict-2.1.0-py3-none-any.whl
Collecting sqlparse==0.4.4 (from -r requirements.txt (line 190))
  Using cached sqlparse-0.4.4-py3-none-any.whl.metadata (4.0 kB)
Collecting starlette-context==0.3.5 (from -r requirements.txt (line 191))
  Using cached starlette_context-0.3.5-py37-none-any.whl.metadata (3.6 kB)
Collecting starlette-graphene3==0.6.0 (from -r requirements.txt (line 192))
  Using cached starlette_graphene3-0.6.0-py3-none-any.whl.metadata (4.2 kB)
Collecting starlette==0.27.0 (from -r requirements.txt (line 193))
  Using cached starlette-0.27.0-py3-none-any.whl.metadata (5.8 kB)
Collecting supervisor==4.2.5 (from -r requirements.txt (line 194))
  Using cached supervisor-4.2.5-py2.py3-none-any.whl.metadata (86 kB)
Collecting svgwrite==1.4.3 (from -r requirements.txt (line 195))
  Using cached svgwrite-1.4.3-py3-none-any.whl.metadata (8.8 kB)
Collecting tenacity==8.2.3 (from -r requirements.txt (line 196))
  Using cached tenacity-8.2.3-py3-none-any.whl.metadata (1.0 kB)
Collecting tifffile==2021.11.2 (from -r requirements.txt (line 197))
  Using cached tifffile-2021.11.2-py3-none-any.whl (178 kB)
Collecting tinydb==4.8.0 (from -r requirements.txt (line 198))
  Using cached tinydb-4.8.0-py3-none-any.whl.metadata (6.2 kB)
Collecting tomli==2.0.1 (from -r requirements.txt (line 199))
  Using cached tomli-2.0.1-py3-none-any.whl.metadata (8.9 kB)
Collecting tornado==6.2 (from -r requirements.txt (line 200))
  Using cached tornado-6.2-cp37-abi3-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.5 kB)
Collecting tqdm==4.66.1 (from -r requirements.txt (line 201))
  Using cached tqdm-4.66.1-py3-none-any.whl.metadata (57 kB)
Collecting tuspy==1.0.1 (from -r requirements.txt (line 202))
  Using cached tuspy-1.0.1-py3-none-any.whl.metadata (3.5 kB)
Collecting tuswsgi==0.5.5 (from -r requirements.txt (line 203))
  Using cached tuswsgi-0.5.5-py2.py3-none-any.whl.metadata (2.2 kB)
Collecting typing-extensions==4.7.1 (from -r requirements.txt (line 204))
  Using cached typing_extensions-4.7.1-py3-none-any.whl.metadata (3.1 kB)
Collecting tzlocal==5.1 (from -r requirements.txt (line 206))
  Using cached tzlocal-5.1-py3-none-any.whl.metadata (16 kB)
Collecting ubiquerg==0.6.3 (from -r requirements.txt (line 207))
  Using cached ubiquerg-0.6.3-py2.py3-none-any.whl.metadata (1.9 kB)
Collecting urllib3==1.26.18 (from -r requirements.txt (line 208))
  Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB)
Collecting uvicorn==0.22.0 (from -r requirements.txt (line 209))
  Using cached uvicorn-0.22.0-py3-none-any.whl.metadata (6.3 kB)
Collecting uvloop==0.18.0 (from -r requirements.txt (line 210))
  Using cached uvloop-0.18.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (4.9 kB)
Collecting vine==5.1.0 (from -r requirements.txt (line 211))
  Using cached vine-5.1.0-py3-none-any.whl.metadata (2.7 kB)
Collecting wcwidth==0.2.12 (from -r requirements.txt (line 212))
  Using cached wcwidth-0.2.12-py2.py3-none-any.whl.metadata (14 kB)
Collecting webencodings==0.5.1 (from -r requirements.txt (line 213))
  Using cached webencodings-0.5.1-py2.py3-none-any.whl (11 kB)
Collecting webob==1.8.7 (from -r requirements.txt (line 214))
  Using cached WebOb-1.8.7-py2.py3-none-any.whl (114 kB)
Collecting whoosh==2.7.4 (from -r requirements.txt (line 215))
  Using cached Whoosh-2.7.4-py2.py3-none-any.whl (468 kB)
Collecting wrapt==1.16.0 (from -r requirements.txt (line 216))
  Using cached wrapt-1.16.0-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB)
Collecting yacman==0.9.2 (from -r requirements.txt (line 217))
  Using cached yacman-0.9.2-py3-none-any.whl.metadata (1.8 kB)
Collecting yarl==1.9.3 (from -r requirements.txt (line 218))
  Using cached yarl-1.9.3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (28 kB)
Collecting zipp==3.15.0 (from -r requirements.txt (line 219))
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Collecting zipstream-new==1.1.8 (from -r requirements.txt (line 220))
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Collecting zstandard==0.21.0 (from -r requirements.txt (line 221))
  Using cached zstandard-0.21.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.9 kB)
Using cached a2wsgi-1.7.0-py3-none-any.whl (11 kB)
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Using cached aioitertools-0.11.0-py3-none-any.whl (23 kB)
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Using cached apispec-6.3.0-py3-none-any.whl (29 kB)
Using cached argcomplete-3.1.2-py3-none-any.whl (41 kB)
Using cached async_timeout-4.0.3-py3-none-any.whl (5.7 kB)
Using cached attrs-23.1.0-py3-none-any.whl (61 kB)
Using cached Babel-2.13.1-py3-none-any.whl (10.1 MB)
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Using cached charset_normalizer-3.3.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (136 kB)
Using cached circus-0.18.0-py3-none-any.whl (200 kB)
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Using cached zstandard-0.21.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (2.7 MB)
Installing collected packages: zipstream-new, whoosh, webencodings, wcwidth, ubiquerg, sqlitedict, sortedcontainers, shellescape, repoze-lru, pytz, pyeventsystem, parsley, msgpack, mistune, mercurial, edam-ontology, docopt, dictobj, cached-property, boto, boltons, billiard, beaker, bagit, arcp, appdirs, aniso8601, zstandard, zipp, wrapt, webob, vine, uvloop, urllib3, typing-extensions, tqdm, tornado, tomli, tinydb, tenacity, svgwrite, supervisor, sqlparse, sniffio, six, setuptools-scm, ruamel-yaml-clib, regex, pyzmq, pyyaml, python-multipart, python-magic, pysam, pyrsistent, pyparsing, pygments, pycryptodome, pycparser, pyasn1, psutil, prompt-toolkit, pkgutil-resolve-name, pebble, packaging, orjson, oauthlib, numpy, nodeenv, mypy-extensions, multidict, mdurl, markupsafe, lxml, lagom, jsonref, jmespath, isal, idna, humanfriendly, greenlet, future, fsspec, frozenlist, filelock, exceptiongroup, docutils, dnspython, defusedxml, decorator, cheetah3, charset-normalizer, certifi, bcrypt, backports-zoneinfo, babel, attmap, asynctest, aiofiles, a2wsgi, yarl, tzlocal, tuswsgi, tifffile, ruamel-yaml, rsa, routes, requests, python3-openid, python-dateutil, pyjwt, pydot, pydantic, promise, paste, oyaml, networkx, mrcfile, markdown-it-py, jinja2, isodate, importlib-resources, importlib-metadata, h5py, h11, graphql-core, galaxy-sequence-utils, fs, email-validator, ecdsa, dparse, deprecation, coloredlogs, circus, cffi, bx-python, bleach, async-timeout, apispec, anyio, amqp, aiosignal, aioitertools, aiodataloader, starlette, sqlalchemy, rich, requests-unixsocket, requests-toolbelt, requests-oauthlib, rdflib, python-jose, pynacl, pylibmagic, pykwalify, pyfaidx, pydantic-tes, pastedeploy, markdown, mako, kombu, isa-rwval, h5grove, gunicorn, graphql-relay, cryptography, conda-package-streaming, cloudbridge, click, cachecontrol, botocore, bagit-profile, attrs, argcomplete, uvicorn, starlette-context, social-auth-core, prov, paramiko, jsonschema, gravity, graphene, fastapi, click-repl, click-plugins, click-didyoumean, bdbag, alembic, aiohttp, adal, yacman, tuspy, starlette-graphene3, schema-salad, pulsar-galaxy-lib, msal, graphene-sqlalchemy, fastapi-utils, cloudauthz, celery, aiobotocore, s3fs, refgenconf, cwl-upgrader, bioblend, gxformat2, cwl-utils, galaxy2cwl, cwltool, rocrate
Successfully installed a2wsgi-1.7.0 adal-1.2.7 aiobotocore-2.4.2 aiodataloader-0.4.0 aiofiles-23.2.1 aiohttp-3.8.6 aioitertools-0.11.0 aiosignal-1.3.1 alembic-1.12.1 amqp-5.2.0 aniso8601-9.0.1 anyio-3.7.1 apispec-6.3.0 appdirs-1.4.4 arcp-0.2.1 argcomplete-3.1.2 async-timeout-4.0.3 asynctest-0.13.0 attmap-0.13.2 attrs-23.1.0 babel-2.13.1 backports-zoneinfo-0.2.1 bagit-1.8.1 bagit-profile-1.3.1 bcrypt-4.0.1 bdbag-1.7.1 beaker-1.12.1 billiard-3.6.4.0 bioblend-1.2.0 bleach-6.0.0 boltons-23.1.1 boto-2.49.0 botocore-1.27.59 bx-python-0.10.0 cachecontrol-0.13.1 cached-property-1.5.2 celery-5.2.7 certifi-2023.11.17 cffi-1.15.1 charset-normalizer-3.3.2 cheetah3-3.2.6.post1 circus-0.18.0 click-8.1.7 click-didyoumean-0.3.0 click-plugins-1.1.1 click-repl-0.3.0 cloudauthz-0.6.0 cloudbridge-3.2.0 coloredlogs-15.0.1 conda-package-streaming-0.9.0 cryptography-41.0.5 cwl-upgrader-1.2.8 cwl-utils-0.28 cwltool-3.1.20221109155812 decorator-5.1.1 defusedxml-0.7.1 deprecation-2.1.0 dictobj-0.4 dnspython-2.3.0 docopt-0.6.2 docutils-0.18.1 dparse-0.6.3 ecdsa-0.18.0 edam-ontology-1.25.2 email-validator-2.0.0.post2 exceptiongroup-1.2.0 fastapi-0.98.0 fastapi-utils-0.2.1 filelock-3.12.2 frozenlist-1.3.3 fs-2.4.16 fsspec-2023.1.0 future-0.18.3 galaxy-sequence-utils-1.1.5 galaxy2cwl-0.1.4 graphene-3.3 graphene-sqlalchemy-3.0.0b3 graphql-core-3.2.3 graphql-relay-3.2.0 gravity-1.0.4 greenlet-2.0.2 gunicorn-21.2.0 gxformat2-0.18.0 h11-0.14.0 h5grove-1.3.0 h5py-3.8.0 humanfriendly-10.0 idna-3.5 importlib-metadata-4.13.0 importlib-resources-5.12.0 isa-rwval-0.10.10 isal-1.3.0 isodate-0.6.1 jinja2-3.1.2 jmespath-1.0.1 jsonref-1.1.0 jsonschema-4.17.3 kombu-5.2.4 lagom-2.6.0 lxml-4.9.3 mako-1.2.4 markdown-3.4.4 markdown-it-py-2.2.0 markupsafe-2.1.3 mdurl-0.1.2 mercurial-6.6 mistune-2.0.5 mrcfile-1.4.3 msal-1.25.0 msgpack-1.0.5 multidict-6.0.4 mypy-extensions-1.0.0 networkx-2.5 nodeenv-1.8.0 numpy-1.21.6 oauthlib-3.2.2 orjson-3.9.7 oyaml-1.0 packaging-23.2 paramiko-3.3.1 parsley-1.3 paste-3.7.1 pastedeploy-3.1.0 pebble-5.0.4 pkgutil-resolve-name-1.3.10 promise-2.3 prompt-toolkit-3.0.41 prov-1.5.1 psutil-5.9.6 pulsar-galaxy-lib-0.15.5 pyasn1-0.5.1 pycparser-2.21 pycryptodome-3.19.0 pydantic-1.10.13 pydantic-tes-0.1.5 pydot-1.4.2 pyeventsystem-0.1.0 pyfaidx-0.7.2.2 pygments-2.17.2 pyjwt-2.8.0 pykwalify-1.8.0 pylibmagic-0.5.0 pynacl-1.5.0 pyparsing-3.0.9 pyrsistent-0.19.3 pysam-0.22.0 python-dateutil-2.8.2 python-jose-3.3.0 python-magic-0.4.27 python-multipart-0.0.7 python3-openid-3.2.0 pytz-2023.3.post1 pyyaml-6.0.1 pyzmq-25.1.1 rdflib-6.2.0 refgenconf-0.12.2 regex-2023.10.3 repoze-lru-0.7 requests-2.31.0 requests-oauthlib-1.3.1 requests-toolbelt-1.0.0 requests-unixsocket-0.3.0 rich-13.7.0 rocrate-0.9.0 routes-2.5.1 rsa-4.9 ruamel-yaml-0.17.21 ruamel-yaml-clib-0.2.8 s3fs-2023.1.0 schema-salad-8.4.20230808163024 setuptools-scm-5.0.2 shellescape-3.8.1 six-1.16.0 sniffio-1.3.0 social-auth-core-4.0.3 sortedcontainers-2.4.0 sqlalchemy-1.4.50 sqlitedict-2.1.0 sqlparse-0.4.4 starlette-0.27.0 starlette-context-0.3.5 starlette-graphene3-0.6.0 supervisor-4.2.5 svgwrite-1.4.3 tenacity-8.2.3 tifffile-2021.11.2 tinydb-4.8.0 tomli-2.0.1 tornado-6.2 tqdm-4.66.1 tuspy-1.0.1 tuswsgi-0.5.5 typing-extensions-4.7.1 tzlocal-5.1 ubiquerg-0.6.3 urllib3-1.26.18 uvicorn-0.22.0 uvloop-0.18.0 vine-5.1.0 wcwidth-0.2.12 webencodings-0.5.1 webob-1.8.7 whoosh-2.7.4 wrapt-1.16.0 yacman-0.9.2 yarl-1.9.3 zipp-3.15.0 zipstream-new-1.1.8 zstandard-0.21.0

[notice] A new release of pip is available: 23.3.2 -> 24.0
[notice] To update, run: pip install --upgrade pip

[notice] A new release of pip is available: 23.3.2 -> 24.0
[notice] To update, run: pip install --upgrade pip
Looking in indexes: https://wheels.galaxyproject.org/simple, https://pypi.python.org/simple
Collecting watchdog (from -r /dev/stdin (line 1))
  Using cached watchdog-3.0.0-py3-none-manylinux2014_x86_64.whl.metadata (36 kB)
Using cached watchdog-3.0.0-py3-none-manylinux2014_x86_64.whl (82 kB)
Installing collected packages: watchdog
Successfully installed watchdog-3.0.0

[notice] A new release of pip is available: 23.3.2 -> 24.0
[notice] To update, run: pip install --upgrade pip
Installing node into /scratch/rico/.planemo/gx_venv_3 with nodeenv.
 * Install prebuilt node (18.12.1) ..... done.
 * Appending data to /scratch/rico/.planemo/gx_venv_3/bin/activate
 * Appending data to /scratch/rico/.planemo/gx_venv_3/bin/activate.fish
The Galaxy client build is up to date and will not be rebuilt at this time.
Activating virtualenv at /scratch/rico/.planemo/gx_venv_3
Adding service gunicorn
supervisord is not running
Adding service celery
supervisord is not running
Adding service celery-beat
supervisord is not running
Executing: galaxy 
2024-02-23 14:21:29,531 WARN No file matches via include "/tmp/tmpqrlh6ih1/gravity/supervisor/supervisord.conf.d/*.conf"
2024-02-23 14:21:29,531 INFO Included extra file "/tmp/tmpqrlh6ih1/gravity/supervisor/supervisord.conf.d/_default_.d/galaxy_celery-beat_celery-beat.conf" during parsing
2024-02-23 14:21:29,531 INFO Included extra file "/tmp/tmpqrlh6ih1/gravity/supervisor/supervisord.conf.d/_default_.d/galaxy_celery_celery.conf" during parsing
2024-02-23 14:21:29,531 INFO Included extra file "/tmp/tmpqrlh6ih1/gravity/supervisor/supervisord.conf.d/_default_.d/galaxy_gunicorn_gunicorn.conf" during parsing
2024-02-23 14:21:29,535 INFO RPC interface 'supervisor' initialized
2024-02-23 14:21:29,536 CRIT Server 'unix_http_server' running without any HTTP authentication checking
2024-02-23 14:21:29,536 INFO supervisord started with pid 78500
2024-02-23 14:21:29,833 INFO spawned: 'celery' with pid 78503
2024-02-23 14:21:29,836 INFO spawned: 'celery-beat' with pid 78504
2024-02-23 14:21:29,839 INFO spawned: 'gunicorn' with pid 78505
==> /tmp/tmpqrlh6ih1/gravity/log/gunicorn.log <==

==> /tmp/tmpqrlh6ih1/gravity/log/celery.log <==

==> /tmp/tmpqrlh6ih1/gravity/log/celery-beat.log <==
Working directory: /scratch/rico/galaxy
Executing: PYTHONPATH=lib GALAXY_CONFIG_FILE=/tmp/tmpqrlh6ih1/galaxy.yml celery --app galaxy.celery beat --loglevel DEBUG --schedule /tmp/tmpqrlh6ih1/gravity/celery-beat-schedule

==> /tmp/tmpqrlh6ih1/gravity/log/celery.log <==
Working directory: /scratch/rico/galaxy
Executing: PYTHONPATH=lib GALAXY_CONFIG_FILE=/tmp/tmpqrlh6ih1/galaxy.yml celery --app galaxy.celery worker --concurrency 2 --loglevel DEBUG --pool threads --queues celery,galaxy.internal,galaxy.external 

==> /tmp/tmpqrlh6ih1/gravity/log/gunicorn.log <==
Working directory: /scratch/rico/galaxy
Executing: PYTHONPATH=lib GALAXY_CONFIG_FILE=/tmp/tmpqrlh6ih1/galaxy.yml gunicorn 'galaxy.webapps.galaxy.fast_factory:factory()' --timeout 300 --pythonpath lib -k galaxy.webapps.galaxy.workers.Worker -b localhost:9090 --workers=1 --config python:galaxy.web_stack.gunicorn_config --preload 

==> /tmp/tmpqrlh6ih1/gravity/log/celery.log <==
Option master_api_key has been deprecated in favor of bootstrap_admin_api_key
No corresponding location name exists for location code: .

==> /tmp/tmpqrlh6ih1/gravity/log/celery-beat.log <==
Option master_api_key has been deprecated in favor of bootstrap_admin_api_key
No corresponding location name exists for location code: .

==> /tmp/tmpqrlh6ih1/gravity/log/gunicorn.log <==
Option master_api_key has been deprecated in favor of bootstrap_admin_api_key
No corresponding location name exists for location code: .
DEBUG:yacman.yacman:Patching yaml loader
DEBUG:yacman.yacman1:Using yacman version 0.9.2

==> /tmp/tmpqrlh6ih1/gravity/log/celery.log <==
[2024-02-23 14:21:33,665: DEBUG/MainProcess] | Worker: Preparing bootsteps.
[2024-02-23 14:21:33,667: DEBUG/MainProcess] | Worker: Building graph...
[2024-02-23 14:21:33,668: DEBUG/MainProcess] | Worker: New boot order: {Timer, Hub, Pool, Autoscaler, StateDB, Beat, Consumer}
[2024-02-23 14:21:33,673: DEBUG/MainProcess] | Consumer: Preparing bootsteps.
[2024-02-23 14:21:33,673: DEBUG/MainProcess] | Consumer: Building graph...
[2024-02-23 14:21:33,689: DEBUG/MainProcess] | Consumer: New boot order: {Connection, Events, Mingle, Gossip, Tasks, Control, Agent, Heart, event loop}
 
 -------------- celery@laila v5.2.7 (dawn-chorus)
--- ***** ----- 
-- ******* ---- Linux-4.19.0-26-amd64-x86_64-with-debian-10.13 2024-02-23 14:21:33
- *** --- * --- 
- ** ---------- [config]
- ** ---------- .> app:         galaxy:0x7f9f17483748
- ** ---------- .> transport:   sqlalchemy+sqlite:////tmp/tmpqrlh6ih1/galaxy.sqlite
- ** ---------- .> results:     disabled://
- *** --- * --- .> concurrency: 2 (thread)
-- ******* ---- .> task events: OFF (enable -E to monitor tasks in this worker)
--- ***** ----- 
 -------------- [queues]
                .> celery           exchange=celery(direct) key=celery
                .> galaxy.external  exchange=galaxy.external(direct) key=galaxy.external
                .> galaxy.internal  exchange=galaxy.internal(direct) key=galaxy.internal

[tasks]
  . celery.accumulate
  . celery.backend_cleanup
  . celery.chain
  . celery.chord
  . celery.chord_unlock
  . celery.chunks
  . celery.group
  . celery.map
  . celery.starmap
  . galaxy.change_datatype
  . galaxy.clean_object_store_caches
  . galaxy.cleanup_expired_notifications
  . galaxy.cleanup_short_term_storage
  . galaxy.compute_dataset_hash
  . galaxy.export_history
  . galaxy.fetch_data
  . galaxy.finish_job
  . galaxy.import_data_bundle
  . galaxy.import_model_store
  . galaxy.materialize
  . galaxy.prepare_dataset_collection_download
  . galaxy.prepare_history_content_download
  . galaxy.prepare_history_download
  . galaxy.prepare_invocation_download
  . galaxy.prepare_pdf_download
  . galaxy.prune_history_audit_table
  . galaxy.purge_datasets
  . galaxy.purge_hda
  . galaxy.recalculate_user_disk_usage
  . galaxy.set_job_metadata
  . galaxy.set_metadata
  . galaxy.setup_fetch_data
  . galaxy.touch
  . galaxy.write_history_content_to
  . galaxy.write_history_to
  . galaxy.write_invocation_to

[2024-02-23 14:21:33,704: DEBUG/MainProcess] | Worker: Starting Pool
[2024-02-23 14:21:33,704: DEBUG/MainProcess] ^-- substep ok
[2024-02-23 14:21:33,704: DEBUG/MainProcess] | Worker: Starting Consumer
[2024-02-23 14:21:33,704: DEBUG/MainProcess] | Consumer: Starting Connection
[2024-02-23 14:21:33,711: INFO/MainProcess] Connected to sqlalchemy+sqlite:////tmp/tmpqrlh6ih1/galaxy.sqlite
[2024-02-23 14:21:33,712: DEBUG/MainProcess] ^-- substep ok
[2024-02-23 14:21:33,712: DEBUG/MainProcess] | Consumer: Starting Events
[2024-02-23 14:21:33,712: DEBUG/MainProcess] ^-- substep ok
[2024-02-23 14:21:33,712: DEBUG/MainProcess] | Consumer: Starting Tasks
[2024-02-23 14:21:33,762: DEBUG/MainProcess] ^-- substep ok
[2024-02-23 14:21:33,762: DEBUG/MainProcess] | Consumer: Starting Heart
[2024-02-23 14:21:33,762: DEBUG/MainProcess] ^-- substep ok
[2024-02-23 14:21:33,762: DEBUG/MainProcess] | Consumer: Starting event loop
[2024-02-23 14:21:33,762: INFO/MainProcess] celery@laila ready.

==> /tmp/tmpqrlh6ih1/gravity/log/gunicorn.log <==
DEBUG:galaxy.app:python path is: /scratch/rico/galaxy, /scratch/rico/.planemo/gx_venv_3/bin, /scratch/rico/galaxy/lib, /usr/lib/python37.zip, /usr/lib/python3.7, /usr/lib/python3.7/lib-dynload, /scratch/rico/.planemo/gx_venv_3/lib/python3.7/site-packages
DEBUG:galaxy.config:Configuration directory is /tmp/tmpqrlh6ih1
DEBUG:galaxy.config:Data directory is /scratch/rico/galaxy/database
DEBUG:galaxy.config:Managed config directory is /tmp/tmpqrlh6ih1
WARNING:galaxy.config:Option master_api_key has been deprecated in favor of bootstrap_admin_api_key
DEBUG:galaxy.config:No extra version JSON file detected at /scratch/rico/galaxy/version.json
WARNING:galaxy.carbon_emissions:No corresponding location name exists for location code: .
INFO:galaxy.carbon_emissions:Using global default values for location name and carbon intensity...

==> /tmp/tmpqrlh6ih1/gravity/log/celery-beat.log <==
[2024-02-23 14:21:34,069: DEBUG/MainProcess] Setting default socket timeout to 30
[2024-02-23 14:21:34,069: INFO/MainProcess] beat: Starting...
[2024-02-23 14:21:34,090: DEBUG/MainProcess] Current schedule:
<ScheduleEntry: cleanup-expired-notifications galaxy.cleanup_expired_notifications() <freq: 1.00 day>
<ScheduleEntry: cleanup-short-term-storage galaxy.cleanup_short_term_storage() <freq: 1.00 hour>
<ScheduleEntry: clean-object-store-caches galaxy.clean_object_store_caches() <freq: 10.00 minutes>
<ScheduleEntry: prune-history-audit-table galaxy.prune_history_audit_table() <freq: 1.00 hour>
<ScheduleEntry: celery.backend_cleanup celery.backend_cleanup() <crontab: 0 4 * * * (m/h/d/dM/MY)>
[2024-02-23 14:21:34,090: DEBUG/MainProcess] beat: Ticking with max interval->5.00 minutes
[2024-02-23 14:21:34,090: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /tmp/tmpqrlh6ih1/gravity/log/gunicorn.log <==
INFO:alembic.runtime.migration:Context impl SQLiteImpl.
INFO:alembic.runtime.migration:Will assume non-transactional DDL.
INFO:alembic.runtime.migration:Running stamp_revision  -> 8a19186a6ee7
DEBUG:alembic.runtime.migration:new branch insert 8a19186a6ee7
INFO:alembic.runtime.migration:Context impl SQLiteImpl.
INFO:alembic.runtime.migration:Will assume non-transactional DDL.
INFO:alembic.runtime.migration:Running stamp_revision  -> d4a650f47a3c
DEBUG:alembic.runtime.migration:new branch insert d4a650f47a3c
INFO:galaxy.app:Install database targeting Galaxy's database configuration.
DEBUG:galaxy.web_stack:GunicornApplicationStack initialized
galaxy.jobs DEBUG 2024-02-23 14:21:34,770 [pN:main,p:78505,tN:MainThread] Loading job configuration from /scratch/rico/galaxytools/tools/ncbi_fcs_adaptor/planemo_job_conf.xml
galaxy.jobs DEBUG 2024-02-23 14:21:34,770 [pN:main,p:78505,tN:MainThread] Read job configuration from file: /scratch/rico/galaxytools/tools/ncbi_fcs_adaptor/planemo_job_conf.xml
galaxy.web_stack.handlers INFO 2024-02-23 14:21:34,781 [pN:main,p:78505,tN:MainThread] JobConfiguration: No job handler assignment method is set, defaulting to 'HANDLER_ASSIGNMENT_METHODS.DB_SKIP_LOCKED', set the `assign_with` attribute on <handlers> to override the default
galaxy.jobs INFO 2024-02-23 14:21:34,781 [pN:main,p:78505,tN:MainThread] Job handler assignment methods set to: db-skip-locked
galaxy.web_stack.handlers DEBUG 2024-02-23 14:21:34,781 [pN:main,p:78505,tN:MainThread] default set to child with id or tag 'docker_local'
galaxy.jobs DEBUG 2024-02-23 14:21:34,781 [pN:main,p:78505,tN:MainThread] Done loading job configuration
galaxy.security.vault WARNING 2024-02-23 14:21:34,965 [pN:main,p:78505,tN:MainThread] No vault configured. We recommend defining the vault_config_file setting in galaxy.yml
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,007 [pN:main,p:78505,tN:MainThread] Loading datatypes from /scratch/rico/galaxy/lib/galaxy/config/sample/datatypes_conf.xml.sample
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,008 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.h.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,008 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.c.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,008 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.cpp.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,008 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.py.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,009 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.go.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,009 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.rs.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,009 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.cs.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,009 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension hep.root.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,009 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:JP2 from the datatype registry for extension jp2.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,009 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Ab1 from the datatype registry for extension ab1.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,010 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.assembly:Amos from the datatype registry for extension afg.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,010 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.goldenpath:GoldenPath from the datatype registry for extension agp.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,011 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.anvio:AnvioComposite from the datatype registry for extension anvio_cog_profile.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,011 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.anvio:AnvioComposite from the datatype registry for extension anvio_composite.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,011 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Data from the datatype registry for extension anvio_classifier.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,011 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.anvio:AnvioContigsDB from the datatype registry for extension anvio_contigs_db.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,012 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.anvio:AnvioDB from the datatype registry for extension anvio_db.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,012 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.anvio:AnvioGenomesDB from the datatype registry for extension anvio_genomes_db.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,012 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.anvio:AnvioPanDB from the datatype registry for extension anvio_pan_db.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,012 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.anvio:AnvioComposite from the datatype registry for extension anvio_pfam_profile.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,012 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.anvio:AnvioProfileDB from the datatype registry for extension anvio_profile_db.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,012 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.anvio:AnvioSamplesDB from the datatype registry for extension anvio_samples_db.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,012 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension anvio_state.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,012 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.anvio:AnvioStructureDB from the datatype registry for extension anvio_structure_db.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,012 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:TSV from the datatype registry for extension anvio_variability.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,012 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Arff from the datatype registry for extension arff.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,013 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Paf from the datatype registry for extension paf.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,013 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Gfa1 from the datatype registry for extension gfa1.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,013 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Gfa2 from the datatype registry for extension gfa2.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,013 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:GenericAsn1 from the datatype registry for extension asn1.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,013 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:GenericAsn1Binary from the datatype registry for extension asn1-binary.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,013 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:Axt from the datatype registry for extension axt.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,013 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:FeatureLocationIndex from the datatype registry for extension fli.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,013 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Bam from the datatype registry for extension bam.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,013 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension bai.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,013 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:BamInputSorted from the datatype registry for extension qname_input_sorted.bam.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,014 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:BamQuerynameSorted from the datatype registry for extension qname_sorted.bam.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,014 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:BamNative from the datatype registry for extension unsorted.bam.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,014 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:ProBam from the datatype registry for extension probam.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,014 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:CRAM from the datatype registry for extension cram.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,014 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:Bed from the datatype registry for extension bed.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,014 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:BedGraph from the datatype registry for extension bedgraph.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,014 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:BedStrict from the datatype registry for extension bedstrict.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,014 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:Bed6 from the datatype registry for extension bed6.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,014 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:Bed12 from the datatype registry for extension bed12.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,014 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:ProBed from the datatype registry for extension probed.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,015 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.chrominfo:ChromInfo from the datatype registry for extension len.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,015 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:DAA from the datatype registry for extension daa.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,015 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RMA6 from the datatype registry for extension rma6.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,015 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:DMND from the datatype registry for extension dmnd.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,015 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Parquet from the datatype registry for extension parquet.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,015 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Idat from the datatype registry for extension idat.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,015 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:BigBed from the datatype registry for extension bigbed.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,015 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:BigWig from the datatype registry for extension bigwig.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,015 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension cxb.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,016 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:ChromatinInteractions from the datatype registry for extension chrint.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,016 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:CSV from the datatype registry for extension csv.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,016 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:TSV from the datatype registry for extension tsv.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,016 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:TSV from the datatype registry for extension intermine_tabular.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,016 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:CustomTrack from the datatype registry for extension customtrack.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,016 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.ngsindex:BowtieColorIndex from the datatype registry for extension bowtie_color_index.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,017 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.ngsindex:BowtieBaseIndex from the datatype registry for extension bowtie_base_index.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,017 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:csFasta from the datatype registry for extension csfasta.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,017 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Data from the datatype registry for extension data.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,017 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension gz.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,017 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension binary.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,017 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension d3_hierarchy.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,017 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:ImgtJson from the datatype registry for extension imgt.json.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,017 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:GeoJson from the datatype registry for extension geojson.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,017 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension data_manager_json.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,017 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:DotBracket from the datatype registry for extension dbn.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,017 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension fai.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,018 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:Fasta from the datatype registry for extension fasta.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,018 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:Fastg from the datatype registry for extension fastg.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,018 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:Fastq from the datatype registry for extension fastq.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,018 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:FastqSanger from the datatype registry for extension fastqsanger.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,018 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:FastqSolexa from the datatype registry for extension fastqsolexa.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,019 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:FastqCSSanger from the datatype registry for extension fastqcssanger.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,019 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:FastqIllumina from the datatype registry for extension fastqillumina.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,019 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:SequenceSplitLocations from the datatype registry for extension fqtoc.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,019 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Eland from the datatype registry for extension eland.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,019 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:ElandMulti from the datatype registry for extension elandmulti.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,019 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tracks:GeneTrack from the datatype registry for extension genetrack.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,019 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:Gff from the datatype registry for extension gff.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,019 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:Gff3 from the datatype registry for extension gff3.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,020 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Gif from the datatype registry for extension gif.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,020 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Gmaj from the datatype registry for extension gmaj.zip.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,020 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension graph_dot.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,020 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:Gtf from the datatype registry for extension gtf.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,020 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension toolshed.gz.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,020 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension hdf4.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,020 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:H5 from the datatype registry for extension h5.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,020 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:H5 from the datatype registry for extension scool.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,020 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Grib from the datatype registry for extension grib.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,021 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Loom from the datatype registry for extension loom.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,021 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Anndata from the datatype registry for extension h5ad.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,021 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Visium from the datatype registry for extension visium.tar.gz.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,021 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:H5 from the datatype registry for extension mz5.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,021 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension hyphy_results.json.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,021 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension hivtrace.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,021 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Cool from the datatype registry for extension cool.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,021 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:MCool from the datatype registry for extension mcool.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,021 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:H5MLM from the datatype registry for extension h5mlm.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,021 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:LudwigModel from the datatype registry for extension ludwig_model.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,021 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Html from the datatype registry for extension html.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,022 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Html from the datatype registry for extension ludwig_report.html.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,022 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:Interval from the datatype registry for extension interval.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,022 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension jellyfish.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,022 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension ktab.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,022 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension hist.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,022 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension prof.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,103 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.isa:IsaTab from the datatype registry for extension isa-tab.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,103 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.isa:IsaJson from the datatype registry for extension isa-json.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,103 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension picard_interval_list.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,103 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension gatk_interval.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,103 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension gatk_report.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,104 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension gatk_dbsnp.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,104 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension gatk_tranche.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,104 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension gatk_recal.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,104 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension cnn.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,104 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension cns.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,104 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension cnr.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,104 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension hhr.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,105 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Jpg from the datatype registry for extension jpg.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,105 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension tiff.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,105 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension tf2.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,105 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension tf8.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,105 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension btf.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,105 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension tif.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,105 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension svs.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,105 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension scn.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,105 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension bif.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,105 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:OMETiff from the datatype registry for extension ome.tiff.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,106 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Hamamatsu from the datatype registry for extension vms.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,106 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Hamamatsu from the datatype registry for extension vmu.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,106 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Hamamatsu from the datatype registry for extension ndpi.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,106 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Mirax from the datatype registry for extension mrxs.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,106 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Sakura from the datatype registry for extension svslide.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,106 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Bmp from the datatype registry for extension bmp.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,106 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Im from the datatype registry for extension im.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,106 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Pcd from the datatype registry for extension pcd.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,106 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Pcx from the datatype registry for extension pcx.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,106 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Ppm from the datatype registry for extension ppm.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,106 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Psd from the datatype registry for extension psd.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,106 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Xbm from the datatype registry for extension xbm.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,106 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Xpm from the datatype registry for extension xpm.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,106 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Rgb from the datatype registry for extension rgb.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,107 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Pbm from the datatype registry for extension pbm.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,107 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Pgm from the datatype registry for extension pgm.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,107 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Nrrd from the datatype registry for extension nrrd.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,107 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Nrrd from the datatype registry for extension nhdr.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,107 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:RNADotPlotMatrix from the datatype registry for extension rna_eps.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,108 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.qiime2:QIIME2Artifact from the datatype registry for extension qza.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,108 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.qiime2:QIIME2Visualization from the datatype registry for extension qzv.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,108 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.qiime2:QIIME2Metadata from the datatype registry for extension qiime2.tabular.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,108 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:CompressedZipArchive from the datatype registry for extension zip.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,108 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:CompressedZipArchive from the datatype registry for extension ncbi_genome_dataset.zip.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,108 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension tar.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,108 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Directory from the datatype registry for extension directory.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,108 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Yaml from the datatype registry for extension yaml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,109 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension mrm.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,111 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:Dta from the datatype registry for extension dta.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,111 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:Dta2d from the datatype registry for extension dta2d.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,111 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:Edta from the datatype registry for extension edta.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,111 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:PepXml from the datatype registry for extension pepxml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,111 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:PepXml from the datatype registry for extension raw_pepxml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,111 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:PepXml from the datatype registry for extension peptideprophet_pepxml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,111 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:PepXml from the datatype registry for extension interprophet_pepxml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,111 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:ProtXML from the datatype registry for extension protxml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,112 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:ParamXml from the datatype registry for extension paramxml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,112 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:Kroenik from the datatype registry for extension kroenik.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,112 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:PepList from the datatype registry for extension peplist.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,112 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:PSMS from the datatype registry for extension psms.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,112 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:PepXmlReport from the datatype registry for extension pepxml.tsv.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,112 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:ProtXmlReport from the datatype registry for extension protxml.tsv.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,112 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:MascotDat from the datatype registry for extension mascotdat.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,112 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:MzIdentML from the datatype registry for extension mzid.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,112 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:IdXML from the datatype registry for extension idxml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,112 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:TandemXML from the datatype registry for extension tandem.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,112 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension sirius.ms.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,112 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:ThermoRAW from the datatype registry for extension thermo.raw.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,112 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:BafTar from the datatype registry for extension brukerbaf.d.tar.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,113 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:YepTar from the datatype registry for extension agilentbrukeryep.d.tar.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,113 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:TdfTar from the datatype registry for extension brukertdf.d.tar.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,113 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:MassHunterTar from the datatype registry for extension agilentmasshunter.d.tar.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,113 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:MassLynxTar from the datatype registry for extension watersmasslynx.raw.tar.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,113 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:WiffTar from the datatype registry for extension wiff.tar.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,113 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Wiff2Tar from the datatype registry for extension wiff2.tar.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,113 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:MascotXML from the datatype registry for extension mascotxml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,113 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:MzTab from the datatype registry for extension mztab.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,113 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:MzTab2 from the datatype registry for extension mztab2.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,113 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:MzML from the datatype registry for extension mzml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,113 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:NmrML from the datatype registry for extension nmrml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,113 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Meryldb from the datatype registry for extension meryldb.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,113 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Bref3 from the datatype registry for extension bref3.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,114 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:Mgf from the datatype registry for extension mgf.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,114 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:Wiff from the datatype registry for extension wiff.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,114 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:Wiff2 from the datatype registry for extension wiff2.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,114 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:MzXML from the datatype registry for extension mzxml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,114 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:MzData from the datatype registry for extension mzdata.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,114 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:Ms2 from the datatype registry for extension ms2.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,114 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:MzQuantML from the datatype registry for extension mzq.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,114 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:SQlite from the datatype registry for extension sqlite.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,114 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:MzSQlite from the datatype registry for extension mz.sqlite.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,114 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:OSW from the datatype registry for extension osw.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,114 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:PQP from the datatype registry for extension pqp.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,114 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:TraML from the datatype registry for extension traml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,115 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:TrafoXML from the datatype registry for extension trafoxml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,115 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:FeatureXML from the datatype registry for extension featurexml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,115 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:ConsensusXML from the datatype registry for extension consensusxml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,115 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:UniProtXML from the datatype registry for extension uniprotxml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,115 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:XquestXML from the datatype registry for extension xquest.xml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,115 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:XquestSpecXML from the datatype registry for extension spec.xml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,115 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:QCML from the datatype registry for extension qcml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,115 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension mzqc.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,115 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:Msp from the datatype registry for extension msp.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,115 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:SPLibNoIndex from the datatype registry for extension splib_noindex.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,115 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:SPLib from the datatype registry for extension splib.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,115 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:BlibSQlite from the datatype registry for extension blib.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,115 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:DlibSQlite from the datatype registry for extension dlib.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,116 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:ElibSQlite from the datatype registry for extension elib.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,116 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:XHunterAslFormat from the datatype registry for extension hlf.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,116 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:IdpDB from the datatype registry for extension idpdb.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,116 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:Sf3 from the datatype registry for extension sf3.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,116 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension cps.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,116 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:ConnectivityTable from the datatype registry for extension ct.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,116 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:PostgresqlArchive from the datatype registry for extension postgresql.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,116 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:MongoDBArchive from the datatype registry for extension mongodb.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,116 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:GeneNoteBook from the datatype registry for extension genenotebook.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,116 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:SearchGuiArchive from the datatype registry for extension searchgui_archive.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,116 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Fast5Archive from the datatype registry for extension fast5.tar.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,116 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Fast5ArchiveGz from the datatype registry for extension fast5.tar.gz.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,116 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Fast5ArchiveBz2 from the datatype registry for extension fast5.tar.bz2.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,117 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension peptideshaker_archive.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,117 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension percin.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,117 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.xml:GenericXml from the datatype registry for extension percout.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,117 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension hardklor.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,117 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension kronik.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,117 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:ImzML from the datatype registry for extension imzml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,117 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Analyze75 from the datatype registry for extension analyze75.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,117 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Nifti1 from the datatype registry for extension nii1.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,117 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Nifti2 from the datatype registry for extension nii2.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,118 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Gifti from the datatype registry for extension gii.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,118 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Tck from the datatype registry for extension tck.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,118 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Trk from the datatype registry for extension trk.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,118 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Mrc2014 from the datatype registry for extension mrc.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,118 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Star from the datatype registry for extension star.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,118 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:PEFF from the datatype registry for extension peff.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,118 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension toml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,118 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.flow:FCS from the datatype registry for extension fcs.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,119 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowtext.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,119 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowclr.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,119 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowmfi.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,119 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowstat1.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,119 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowstat2.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,119 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowstat3.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,119 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowscore.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,120 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension flowframe.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,120 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension fsom.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,120 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension flowset.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,120 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension metacyto_clr.txt.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,120 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.metacyto:mSummary from the datatype registry for extension metacyto_summary.txt.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,120 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.metacyto:mStats from the datatype registry for extension metacyto_stats.txt.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,120 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension deeptools_compute_matrix_archive.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,121 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension deeptools_coverage_matrix.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,121 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:NetCDF from the datatype registry for extension netcdf.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,121 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Eps from the datatype registry for extension eps.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,121 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Rast from the datatype registry for extension rast.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,121 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Laj from the datatype registry for extension laj.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,121 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:Lav from the datatype registry for extension lav.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,121 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:Maf from the datatype registry for extension maf.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,121 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:MafCustomTrack from the datatype registry for extension mafcustomtrack.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,121 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:MatrixMarket from the datatype registry for extension mtx.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,121 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:CMAP from the datatype registry for extension cmap.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,121 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:ENCODEPeak from the datatype registry for extension encodepeak.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,122 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Pdf from the datatype registry for extension pdf.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,122 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Pileup from the datatype registry for extension pileup.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,122 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Psl from the datatype registry for extension psl.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,122 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Obo from the datatype registry for extension obo.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,122 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.xml:Owl from the datatype registry for extension owl.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,122 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Png from the datatype registry for extension png.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,122 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScore from the datatype registry for extension qual.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,122 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScoreSolexa from the datatype registry for extension qualsolexa.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,122 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScoreIllumina from the datatype registry for extension qualillumina.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,122 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScoreSOLiD from the datatype registry for extension qualsolid.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,122 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScore454 from the datatype registry for extension qual454.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,122 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.assembly:Roadmaps from the datatype registry for extension roadmaps.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,122 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Sam from the datatype registry for extension sam.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,123 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Scf from the datatype registry for extension scf.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,123 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.assembly:Sequences from the datatype registry for extension sequences.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,123 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:SnpEffDb from the datatype registry for extension snpeffdb.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,123 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:SnpSiftDbNSFP from the datatype registry for extension snpsiftdbnsfp.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,123 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension dbnsfp.tabular.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,123 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Sff from the datatype registry for extension sff.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,123 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Sra from the datatype registry for extension sra.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,123 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:SraManifest from the datatype registry for extension sra_manifest.tabular.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,123 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.xml:GenericXml from the datatype registry for extension svg.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,123 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Taxonomy from the datatype registry for extension taxonomy.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,123 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension tabular.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,124 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:TwoBit from the datatype registry for extension twobit.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,124 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:SQmass from the datatype registry for extension sqmass.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,124 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:GeminiSQLite from the datatype registry for extension gemini.sqlite.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,124 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:ChiraSQLite from the datatype registry for extension chira.sqlite.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,124 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:CuffDiffSQlite from the datatype registry for extension cuffdiff.sqlite.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,124 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:GAFASQLite from the datatype registry for extension gafa.sqlite.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,124 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:NcbiTaxonomySQlite from the datatype registry for extension ncbitaxonomy.sqlite.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,124 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension txt.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,124 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:LineCount from the datatype registry for extension linecount.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,124 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:MemePsp from the datatype registry for extension memepsp.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,124 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.xml:MEMEXml from the datatype registry for extension memexml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,124 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.xml:CisML from the datatype registry for extension cisml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,125 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.xml:GenericXml from the datatype registry for extension xml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,125 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.xml:GenericXml from the datatype registry for extension xsd.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,125 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.xml:Dzi from the datatype registry for extension dzi.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,125 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Vcf from the datatype registry for extension vcf.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,125 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Bcf from the datatype registry for extension bcf.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,125 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Bcf from the datatype registry for extension bcf_bgzip.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,126 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:BcfUncompressed from the datatype registry for extension bcf_uncompressed.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,126 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.assembly:Velvet from the datatype registry for extension velvet.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,126 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:Wiggle from the datatype registry for extension wig.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,126 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension interval_index.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,127 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension odgi.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,127 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension vg.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,127 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension xg.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,127 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension protobuf2.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,127 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension protobuf3.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,127 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension onnx.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,127 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension tabix.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,127 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:IntervalTabix from the datatype registry for extension interval_tabix.gz.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,127 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:JuicerMediumTabix from the datatype registry for extension juicer_medium_tabix.gz.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,127 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:BedTabix from the datatype registry for extension bed_tabix.gz.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,128 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:GffTabix from the datatype registry for extension gff_tabix.gz.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,128 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension bgzip.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,128 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:VcfGz from the datatype registry for extension vcf_bgzip.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,128 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension bus.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,128 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension kallisto.idx.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,128 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.xml:Phyloxml from the datatype registry for extension phyloxml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,128 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Newick from the datatype registry for extension newick.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,128 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Newick from the datatype registry for extension nhx.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,128 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Nexus from the datatype registry for extension nex.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,128 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:IQTree from the datatype registry for extension iqtree.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,130 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:SquareDistanceMatrix from the datatype registry for extension mldist.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,132 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Affybatch from the datatype registry for extension affybatch.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,133 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Eigenstratgeno from the datatype registry for extension eigenstratgeno.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,133 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Eigenstratpca from the datatype registry for extension eigenstratpca.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,133 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Eset from the datatype registry for extension eset.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,133 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Fped from the datatype registry for extension fped.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,133 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Fphe from the datatype registry for extension fphe.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,133 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:GenomeGraphs from the datatype registry for extension gg.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,133 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:ldIndep from the datatype registry for extension ldindep.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,133 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:MAlist from the datatype registry for extension malist.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,133 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Lped from the datatype registry for extension lped.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,133 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Pbed from the datatype registry for extension pbed.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,134 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Pheno from the datatype registry for extension pheno.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,134 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Pphe from the datatype registry for extension pphe.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,134 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:RexpBase from the datatype registry for extension rexpbase.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,134 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Rgenetics from the datatype registry for extension rgenetics.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,134 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Snptest from the datatype registry for extension snptest.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,134 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:SNPMatrix from the datatype registry for extension snpmatrix.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,134 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:ExcelXls from the datatype registry for extension xls.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,134 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Ipynb from the datatype registry for extension ipynb.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,134 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension json.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,134 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:ExpressionJson from the datatype registry for extension expression.json.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,135 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.graph:Xgmml from the datatype registry for extension xgmml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,135 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.graph:Sif from the datatype registry for extension sif.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,136 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.triples:Triples from the datatype registry for extension triples.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,136 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.triples:HDT from the datatype registry for extension hdt.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,136 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.triples:NTriples from the datatype registry for extension nt.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,136 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.triples:N3 from the datatype registry for extension n3.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,136 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.triples:Turtle from the datatype registry for extension ttl.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,137 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.triples:Rdf from the datatype registry for extension rdf.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,137 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.triples:Jsonld from the datatype registry for extension jsonld.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,137 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:ExcelXls from the datatype registry for extension excel.xls.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,137 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Xlsx from the datatype registry for extension xlsx.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,137 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension docx.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,137 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension btwisted.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,137 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cai.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,137 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cat_db.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,137 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension charge.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,138 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension checktrans.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,138 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension chips.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,138 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension codcmp.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,138 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension coderet.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,138 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension compseq.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,138 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cpgplot.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,138 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cpgreport.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,138 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cusp.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,138 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cut.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,138 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension dan.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,138 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension digest.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,139 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension dreg.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,139 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension einverted.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,139 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension epestfind.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,139 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension equicktandem.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,139 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension est2genome.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,139 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension etandem.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,139 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension freak.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,139 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension fuzznuc.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,139 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension fuzzpro.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,139 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension fuzztran.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,139 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension garnier.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,140 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension geecee.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,140 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension helixturnhelix.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,140 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension hmoment.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,140 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension isochore.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,140 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension match.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,140 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension nametable.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,140 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension needle.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,140 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension newcpgreport.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,140 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension newcpgseek.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,140 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension noreturn.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,140 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension palindrome.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,141 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pepcoil.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,141 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pepinfo.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,141 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pepstats.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,141 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension polydot.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,141 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension preg.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,141 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension prettyseq.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,141 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension primersearch.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,141 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension showfeat.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,141 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension showorf.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,141 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension sixpack.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,141 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension strider.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,142 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension supermatcher.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,142 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension syco.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,142 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension textsearch.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,142 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension vectorstrip.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,142 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension wobble.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,142 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension wordcount.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,142 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension dbmotif.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,142 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension diffseq.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,142 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension excel.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,142 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension feattable.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,142 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension motif.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,143 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension regions.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,143 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension seqtable.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,143 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension simple.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,143 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension table.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,143 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension tagseq.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,143 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension acedb.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,143 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension clustal.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,143 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension codata.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,143 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension embl.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,143 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension fitch.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,143 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension gcg.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,144 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:Genbank from the datatype registry for extension genbank.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,144 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension hennig86.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,144 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension ig.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,144 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension jackknifer.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,144 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension jackknifernon.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,144 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension mega.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,144 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension meganon.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,144 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension ncbi.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,144 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension nexus.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,144 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension nexusnon.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,145 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.phylip:Phylip from the datatype registry for extension phylip.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,145 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension phylipnon.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,145 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pir.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,145 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension staden.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,145 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension swiss.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,146 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.msa:Msf from the datatype registry for extension msf.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,146 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx0.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,147 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx1.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,147 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx10.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,147 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx2.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,147 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx3.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,147 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pair.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,147 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension score.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,147 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension srs.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,147 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension srspair.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,148 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.annotation:SnapHmm from the datatype registry for extension snaphmm.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,148 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.annotation:Augustus from the datatype registry for extension augustus.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,148 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:ICM from the datatype registry for extension icm.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,148 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.msa:InfernalCM from the datatype registry for extension cm.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,148 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.msa:Hmmer2 from the datatype registry for extension hmm2.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,148 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.msa:Hmmer3 from the datatype registry for extension hmm3.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,148 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.msa:Stockholm_1_0 from the datatype registry for extension stockholm.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,148 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.msa:MauveXmfa from the datatype registry for extension xmfa.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,149 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.microarrays:Cel from the datatype registry for extension cel.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,149 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.microarrays:Gpr from the datatype registry for extension gpr.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,149 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.microarrays:Gal from the datatype registry for extension gal.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,149 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension rds.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,149 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension phyloseq.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,149 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,149 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.sce.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,149 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.raw.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,150 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.msnbase.raw.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,150 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.findchrompeaks.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,150 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.group.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,150 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.retcor.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,150 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.fillpeaks.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,150 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.camera.positive.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,150 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.camera.negative.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,150 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.camera.quick.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,151 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.hdf5:HDF5SummarizedExperiment from the datatype registry for extension rdata.se.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,151 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension rdock_as.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,151 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:OxliCountGraph from the datatype registry for extension oxlicg.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,151 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:OxliNodeGraph from the datatype registry for extension oxling.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,151 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:OxliTagSet from the datatype registry for extension oxlits.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,151 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:OxliStopTags from the datatype registry for extension oxlist.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,151 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:OxliSubset from the datatype registry for extension oxliss.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,151 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:OxliGraphLabels from the datatype registry for extension oxligl.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,152 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:STL from the datatype registry for extension stl.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,153 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:PlyAscii from the datatype registry for extension plyascii.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,153 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:PlyBinary from the datatype registry for extension plybinary.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,153 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:VtkAscii from the datatype registry for extension vtkascii.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,153 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:VtkBinary from the datatype registry for extension vtkbinary.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,153 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Biom1 from the datatype registry for extension biom1.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,153 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Biom2 from the datatype registry for extension biom2.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,153 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:MashSketch from the datatype registry for extension msh.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,153 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:ScIdx from the datatype registry for extension scidx.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,155 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:SMILES from the datatype registry for extension smi.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,155 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:SDF from the datatype registry for extension sdf.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,155 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:InChI from the datatype registry for extension inchi.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,155 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:MOL from the datatype registry for extension mol.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,156 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:MOL2 from the datatype registry for extension mol2.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,156 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:CML from the datatype registry for extension cml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,156 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:FPS from the datatype registry for extension fps.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,156 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:OBFS from the datatype registry for extension obfs.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,156 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:DRF from the datatype registry for extension drf.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,156 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:PHAR from the datatype registry for extension phar.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,156 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:PDB from the datatype registry for extension pdb.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,156 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:PDBQT from the datatype registry for extension pdbqt.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,156 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:PQR from the datatype registry for extension pqr.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,156 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:Cell from the datatype registry for extension cell.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,156 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:CIF from the datatype registry for extension cif.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,157 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:XYZ from the datatype registry for extension xyz.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,157 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:ExtendedXYZ from the datatype registry for extension extxyz.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,157 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Trr from the datatype registry for extension trr.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,157 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Dcd from the datatype registry for extension dcd.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,157 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension top.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,157 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension prmtop.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,157 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension itp.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,157 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension mdp.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,157 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension ndx.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,157 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension xvg.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,157 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Xtc from the datatype registry for extension xtc.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,158 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Cpt from the datatype registry for extension cpt.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,158 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Edr from the datatype registry for extension edr.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,158 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension tpr.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,158 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:GRO from the datatype registry for extension gro.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,158 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension inpcrd.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,158 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Vel from the datatype registry for extension vel.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,158 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:grd from the datatype registry for extension grd.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,158 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:grdtgz from the datatype registry for extension grd.tgz.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,158 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Otu from the datatype registry for extension mothur.otu.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,158 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Otu from the datatype registry for extension mothur.list.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,159 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Sabund from the datatype registry for extension mothur.sabund.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,159 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Sabund from the datatype registry for extension mothur.rabund.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,159 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:GroupAbund from the datatype registry for extension mothur.shared.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,159 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:GroupAbund from the datatype registry for extension mothur.relabund.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,159 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Names from the datatype registry for extension mothur.names.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,159 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Group from the datatype registry for extension mothur.design.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,159 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Summary from the datatype registry for extension mothur.summary.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,159 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Group from the datatype registry for extension mothur.groups.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,159 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Oligos from the datatype registry for extension mothur.oligos.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,159 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:Fasta from the datatype registry for extension mothur.align.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,159 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:AccNos from the datatype registry for extension mothur.accnos.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,160 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:AccNos from the datatype registry for extension mothur.otulabels.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,160 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension mothur.otu.corr.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,160 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:SecondaryStructureMap from the datatype registry for extension mothur.map.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,160 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:AlignCheck from the datatype registry for extension mothur.align.check.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,160 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:AlignReport from the datatype registry for extension mothur.align.report.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,160 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:LaneMask from the datatype registry for extension mothur.filter.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,160 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:DistanceMatrix from the datatype registry for extension mothur.dist.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,160 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension mothur.tre.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,160 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:PairwiseDistanceMatrix from the datatype registry for extension mothur.pair.dist.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,160 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:SquareDistanceMatrix from the datatype registry for extension mothur.square.dist.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,160 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:LowerTriangleDistanceMatrix from the datatype registry for extension mothur.lower.dist.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,160 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:RefTaxonomy from the datatype registry for extension mothur.ref.taxonomy.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,161 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:RefTaxonomy from the datatype registry for extension mothur.seq.taxonomy.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,161 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:RefTaxonomy from the datatype registry for extension mothur.rdp.taxonomy.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,161 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:ConsensusTaxonomy from the datatype registry for extension mothur.cons.taxonomy.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,161 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:TaxonomySummary from the datatype registry for extension mothur.tax.summary.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,161 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Frequency from the datatype registry for extension mothur.freq.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,161 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Quantile from the datatype registry for extension mothur.quan.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,161 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Quantile from the datatype registry for extension mothur.filtered.quan.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,161 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Quantile from the datatype registry for extension mothur.masked.quan.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,161 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Quantile from the datatype registry for extension mothur.filtered.masked.quan.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,161 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Axes from the datatype registry for extension mothur.axes.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,162 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:SffFlow from the datatype registry for extension mothur.sff.flow.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,162 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:CountTable from the datatype registry for extension mothur.count_table.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,162 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.neo4j:Neo4jDB from the datatype registry for extension neostore.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,162 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.neo4j:Neo4jDBzip from the datatype registry for extension neostore.zip.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,162 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tracks:UCSCTrackHub from the datatype registry for extension trackhub.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,163 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.blast:BlastXml from the datatype registry for extension blastxml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,163 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.blast:BlastNucDb from the datatype registry for extension blastdbn.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,163 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.blast:BlastProtDb from the datatype registry for extension blastdbp.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,164 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.blast:BlastDomainDb from the datatype registry for extension blastdbd.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,164 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.blast:LastDb from the datatype registry for extension lastdb.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,164 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.blast:BlastNucDb5 from the datatype registry for extension blastdbn5.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,164 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.blast:BlastProtDb5 from the datatype registry for extension blastdbp5.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,164 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.blast:BlastDomainDb5 from the datatype registry for extension blastdbd5.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,164 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:GenericAsn1 from the datatype registry for extension maskinfo-asn1.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,164 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:GenericAsn1Binary from the datatype registry for extension maskinfo-asn1-binary.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,164 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:GenericAsn1 from the datatype registry for extension pssm-asn1.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,165 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.plant_tribes:PlantTribesKsComponents from the datatype registry for extension ptkscmp.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,165 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.plant_tribes:Smat from the datatype registry for extension smat.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,165 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:GenotypeMatrix from the datatype registry for extension alohomora_gts.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,165 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension alohomora_map.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,165 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension alohomora_maf.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,165 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension alohomora_ped.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,165 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension linkage_pedin.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,166 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:DataIn from the datatype registry for extension linkage_datain.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,166 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:MarkerMap from the datatype registry for extension linkage_map.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,166 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension allegro_ihaplo.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,166 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension allegro_descent.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,166 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:AllegroLOD from the datatype registry for extension allegro_fparam.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,166 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:IdeasPre from the datatype registry for extension ideaspre.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,166 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.xml:Sbml from the datatype registry for extension sbml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,167 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.spaln:SpalnNuclDb from the datatype registry for extension spalndbnp.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,168 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.spaln:SpalnProtDb from the datatype registry for extension spalndba.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,168 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension dada2_dada.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,168 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension dada2_errorrates.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,168 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension dada2_mergepairs.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,168 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension dada2_sequencetable.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,168 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension dada2_uniques.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,168 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension ampvis2.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,169 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension ckpt.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,169 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension tgz.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,171 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.media:Wav from the datatype registry for extension wav.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,171 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.media:Mp3 from the datatype registry for extension mp3.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,172 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.media:Mkv from the datatype registry for extension mkv.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,172 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.media:Mp4 from the datatype registry for extension mp4.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,172 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.media:Flv from the datatype registry for extension flv.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,172 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.media:Mpg from the datatype registry for extension mpg.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,172 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.speech:TextGrid from the datatype registry for extension textgrid.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,172 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.speech:BPF from the datatype registry for extension par.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,172 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension ffindex.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,172 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Data from the datatype registry for extension ffdata.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,173 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Pretext from the datatype registry for extension pretext.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,173 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Html from the datatype registry for extension immuneml_receptors.html.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,173 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:HexrdMaterials from the datatype registry for extension hexrd.materials.h5.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,173 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Npz from the datatype registry for extension npz.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,173 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:HexrdImagesNpz from the datatype registry for extension hexrd.images.npz.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,173 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:HexrdEtaOmeNpz from the datatype registry for extension hexrd.eta_ome.npz.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,173 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Npz from the datatype registry for extension hexrd.scored_orientations.npz.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,173 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension hexrd.accepted_orientations.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,173 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Yaml from the datatype registry for extension hexrd.yml.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,173 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperTess from the datatype registry for extension neper.tess.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,174 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperTesr from the datatype registry for extension neper.tesr.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,174 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperPoints from the datatype registry for extension neper.points.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,174 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperPointsTabular from the datatype registry for extension neper.points.tsv.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,174 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperMultiScaleCell from the datatype registry for extension neper.mscell.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,174 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:GmshMsh from the datatype registry for extension gmsh.msh.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,174 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:GmshGeo from the datatype registry for extension gmsh.geo.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,174 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:ZsetGeof from the datatype registry for extension zset.geof.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,174 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension stl.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,174 [pN:main,p:78505,tN:MainThread] Overriding conflicting datatype with extension 'stl', using datatype from /scratch/rico/galaxy/lib/galaxy/config/sample/datatypes_conf.xml.sample.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,174 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Text from the datatype registry for extension pov.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,174 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:PithyaResult from the datatype registry for extension pithya.result.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,174 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:PithyaProperty from the datatype registry for extension pithya.property.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,174 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:PithyaModel from the datatype registry for extension pithya.model.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,175 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:BCSLts from the datatype registry for extension bcsl.ts.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,175 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:BCSLmodel from the datatype registry for extension bcsl.model.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,175 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:StormSample from the datatype registry for extension storm.sample.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,175 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:StormCheck from the datatype registry for extension storm.check.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,175 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:CTLresult from the datatype registry for extension ctl.result.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,175 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Castep from the datatype registry for extension castep.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,175 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Param from the datatype registry for extension param.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,175 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:FormattedDensity from the datatype registry for extension den_fmt.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,176 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.larch:AthenaProject from the datatype registry for extension prj.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,176 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.larch:FEFFInput from the datatype registry for extension inp.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,176 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:CSV from the datatype registry for extension sp.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,176 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:CSV from the datatype registry for extension gds.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,176 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:CSV from the datatype registry for extension feff.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,176 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension feffit.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,176 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension bil.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,176 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension hdr.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,177 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.gis:Shapefile from the datatype registry for extension shp.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,177 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:FITS from the datatype registry for extension fits.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,177 [pN:main,p:78505,tN:MainThread] Retrieved datatype module galaxy.datatypes.chain:Chain from the datatype registry for extension chain.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,177 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.plant_tribes:PlantTribesKsComponents'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,178 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.plant_tribes:Smat'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,178 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Sabund'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,178 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Otu'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,178 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:GroupAbund'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,178 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:SecondaryStructureMap'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,178 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:LowerTriangleDistanceMatrix'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,178 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:SquareDistanceMatrix'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,178 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:PairwiseDistanceMatrix'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,178 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Oligos'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,178 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Quantile'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,178 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Frequency'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,178 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:LaneMask'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,178 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:RefTaxonomy'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,178 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Axes'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,178 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:PlyAscii'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,178 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:PlyBinary'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,178 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:VtkAscii'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,178 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:VtkBinary'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,178 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:NeperTess'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,178 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:NeperTesr'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,178 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:GmshMsh'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,178 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.goldenpath:GoldenPath'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.interval:ScIdx'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.tabular:Vcf'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:JP2'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:TwoBit'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:GeminiSQLite'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:SQmass'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:MzSQlite'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:OSW'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:PQP'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:IdpDB'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:ElibSQlite'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:DlibSQlite'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:BlibSQlite'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:ChiraSQLite'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:CuffDiffSQlite'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:GAFASQLite'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:NcbiTaxonomySQlite'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:SQlite'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:H5MLM'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Cool'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:MCool'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Loom'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Anndata'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,179 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Biom2'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:HexrdMaterials'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:H5'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Grib'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:HexrdImagesNpz'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:HexrdEtaOmeNpz'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Npz'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Bam'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:BamQuerynameSorted'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:BamNative'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:CRAM'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Sff'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Sra'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:NetCDF'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:DAA'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:RMA6'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:DMND'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Parquet'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:BafTar'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:TdfTar'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:MassHunterTar'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:MassLynxTar'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:YepTar'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:WiffTar'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,180 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Fast5ArchiveGz'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,181 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Fast5ArchiveBz2'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,181 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Fast5Archive'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,181 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Meryldb'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,181 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Bref3'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,181 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:PostgresqlArchive'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,181 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:ICM'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,181 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Idat'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,181 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Trr'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,181 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Dcd'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,181 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Xtc'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,181 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Cpt'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,181 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Edr'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,181 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Vel'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,181 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Xlsx'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,181 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.qiime2:QIIME2Metadata'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,181 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.qiime2:QIIME2Artifact'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,181 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.qiime2:QIIME2Visualization'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,181 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:CompressedZipArchive'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,181 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Pretext'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,181 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.annotation:Augustus'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,181 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.xml:Owl'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,182 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.chain:Chain'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,182 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.triples:Rdf'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,182 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.blast:BlastXml'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,182 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Gifti'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,182 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.xml:Phyloxml'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,182 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.xml:Dzi'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,182 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.xml:Sbml'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,182 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Dta2d'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,182 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Edta'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,182 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:ConsensusXML'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,182 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:IdXML'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,182 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:FeatureXML'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,182 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MascotXML'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,182 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Mgf'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,182 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Ms2'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,182 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Msp'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,182 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzData'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,182 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzIdentML'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,182 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzML'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,182 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzQuantML'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,182 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzTab'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,183 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzTab2'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,183 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:ParamXml'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,183 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzXML'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,183 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:NmrML'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,183 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Kroenik'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,183 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:PepList'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,183 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:PSMS'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,183 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:PepXml'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,183 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:ProtXML'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,183 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:SPLib'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,183 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:TandemXML'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,183 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:ThermoRAW'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,183 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:TraML'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,183 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:TrafoXML'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,183 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:UniProtXML'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,183 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:XquestXML'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,183 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:XquestSpecXML'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,183 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:QCML'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,183 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Wiff'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,183 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:PEFF'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,184 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:CML'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,184 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.xml:GenericXml'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,184 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.triples:HDT'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,184 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.triples:Turtle'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,184 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.triples:NTriples'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,184 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.triples:Jsonld'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,184 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Maf'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,184 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Lav'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,184 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:MemePsp'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,184 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Fastg'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,184 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:csFasta'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,184 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.qualityscore:QualityScoreSOLiD'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,184 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.qualityscore:QualityScore454'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,184 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:SDF'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,184 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:PDB'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,184 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:Cell'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,184 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:CIF'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,184 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:ExtendedXYZ'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,184 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:XYZ'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,185 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:MOL2'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,185 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:InChI'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,185 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:FPS'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,185 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:PQR'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,185 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:GRO'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,185 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.phylip:Phylip'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,185 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Fasta'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,185 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:FastqCSSanger'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,185 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:FastqSanger'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,185 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Fastq'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,185 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.interval:Wiggle'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,185 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:Html'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,185 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Pdf'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,185 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Axt'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,185 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Genbank'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,185 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.interval:Bed'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,185 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.interval:CustomTrack'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,186 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.interval:Gtf'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,186 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.interval:Gff'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,186 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.interval:Gff3'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,186 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.tabular:Pileup'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,186 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.tabular:Psl'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,186 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:Paf'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,186 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.interval:Interval'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,186 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.tabular:Sam'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,186 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.data:Newick'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,186 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.data:Nexus'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,186 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:IQTree'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,186 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:Obo'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,186 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:Arff'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,186 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:Ipynb'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,186 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:Biom1'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,186 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:ImgtJson'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,187 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:GeoJson'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,187 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:PithyaResult'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,187 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:BCSLts'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,187 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:Json'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,187 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.genetics:GenotypeMatrix'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,187 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.genetics:DataIn'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,187 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.genetics:MarkerMap'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,187 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.genetics:AllegroLOD'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,187 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:RNADotPlotMatrix'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,187 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:DotBracket'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,187 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.tabular:CMAP'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,187 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.tabular:ConnectivityTable'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,187 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.tabular:CSV'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,187 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.metacyto:mSummary'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,187 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.metacyto:mStats'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,187 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.tabular:TSV'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,188 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.tabular:MatrixMarket'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,188 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.msa:Hmmer2'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,188 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.msa:Hmmer3'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,188 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.msa:Stockholm_1_0'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,188 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.msa:MauveXmfa'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,188 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.msa:InfernalCM'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,188 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.annotation:SnapHmm'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,188 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.microarrays:Cel'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,188 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.microarrays:Gpr'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,188 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.microarrays:Gal'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,188 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:RData'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,188 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:RDS'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,188 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Mrc2014'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,188 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Jpg'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,188 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Png'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,188 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:OMETiff'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,189 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Tiff'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,189 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Bmp'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,189 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Gif'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,189 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Im'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,189 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Pcd'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,189 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Pcx'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,189 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Ppm'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,189 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Psd'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,189 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Xbm'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,189 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Rgb'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,189 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Pbm'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,189 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Pgm'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,189 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Xpm'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,189 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Eps'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,189 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Rast'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,189 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Tck'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,190 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Trk'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,190 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Nifti1'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,190 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Nifti2'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,190 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Star'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,190 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.media:Wav'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,190 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.media:Mkv'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,190 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.media:Mp3'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,190 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.media:Mp4'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,190 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.media:Flv'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,190 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.media:Mpg'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,190 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.speech:TextGrid'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,190 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.speech:BPF'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,190 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.larch:FEFFInput'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,190 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.larch:AthenaProject'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,190 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:Castep'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,191 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:CTLresult'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,191 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:FormattedDensity'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,191 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:Param'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,191 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:Yaml'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,191 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliCountGraph'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,191 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliNodeGraph'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,191 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliTagSet'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,191 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliStopTags'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,191 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliSubset'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,191 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliGraphLabels'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,191 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:FITS'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,191 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.neo4j:Neo4jDBzip'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,191 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:PithyaProperty'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,191 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:PithyaModel'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,191 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:BCSLmodel'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,192 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:StormSample'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,192 [pN:main,p:78505,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:StormCheck'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,196 [pN:main,p:78505,tN:MainThread] Build site file [tool-data/shared/ucsc/ucsc_build_sites.txt] not found using sample [tool-data/shared/ucsc/ucsc_build_sites.txt.sample].
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,196 [pN:main,p:78505,tN:MainThread] Loaded build site 'ucsc': tool-data/shared/ucsc/ucsc_build_sites.txt.sample with display sites: ['main', 'test', 'archaea', 'ucla']
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,197 [pN:main,p:78505,tN:MainThread] Loaded build site 'gbrowse': tool-data/shared/gbrowse/gbrowse_build_sites.txt with display sites: ['modencode', 'sgd_yeast', 'tair', 'wormbase', 'wormbase_ws120', 'wormbase_ws140', 'wormbase_ws170', 'wormbase_ws180', 'wormbase_ws190', 'wormbase_ws200', 'wormbase_ws204', 'wormbase_ws210', 'wormbase_ws220', 'wormbase_ws225']
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,197 [pN:main,p:78505,tN:MainThread] Loaded build site 'ensembl': tool-data/shared/ensembl/ensembl_sites.txt
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,197 [pN:main,p:78505,tN:MainThread] Loaded build site 'ensembl_data_url': tool-data/shared/ensembl/ensembl_sites_data_URL.txt
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,197 [pN:main,p:78505,tN:MainThread] Build site file [tool-data/shared/igv/igv_build_sites.txt] not found using sample [tool-data/shared/igv/igv_build_sites.txt.sample].
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,197 [pN:main,p:78505,tN:MainThread] Loaded build site 'igv': tool-data/shared/igv/igv_build_sites.txt.sample
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,197 [pN:main,p:78505,tN:MainThread] Build site file [tool-data/shared/rviewer/rviewer_build_sites.txt] not found using sample [tool-data/shared/rviewer/rviewer_build_sites.txt.sample].
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,197 [pN:main,p:78505,tN:MainThread] Loaded build site 'rviewer': tool-data/shared/rviewer/rviewer_build_sites.txt.sample
galaxy.util.tool_shed.tool_shed_registry DEBUG 2024-02-23 14:21:35,198 [pN:main,p:78505,tN:MainThread] Loading references to tool sheds from /tmp/tmpqrlh6ih1/tool_sheds_conf.xml
galaxy.util.tool_shed.tool_shed_registry DEBUG 2024-02-23 14:21:35,198 [pN:main,p:78505,tN:MainThread] Loaded reference to tool shed: Target Shed
galaxy.queue_worker INFO 2024-02-23 14:21:35,198 [pN:main,p:78505,tN:MainThread] Initializing main Galaxy Queue Worker on sqlalchemy+sqlite:////tmp/tmpqrlh6ih1/galaxy.sqlite?isolation_level=IMMEDIATE
galaxy.visualization.genomes ERROR 2024-02-23 14:21:35,213 [pN:main,p:78505,tN:MainThread] Error reading twobit.loc
Traceback (most recent call last):
  File "/scratch/rico/galaxy/lib/galaxy/visualization/genomes.py", line 220, in reload_genomes
    with open(twobit_path) as f:
FileNotFoundError: [Errno 2] No such file or directory: '/scratch/rico/galaxy/tool-data/twobit.loc'
galaxy.util WARNING 2024-02-23 14:21:35,452 [pN:main,p:78505,tN:MainThread] directory not found: /scratch/rico/galaxy/lib/galaxy/util/../../../config/plugins/activities
galaxy.tools WARNING 2024-02-23 14:21:35,452 [pN:main,p:78505,tN:MainThread] The default shed tool config file (/tmp/tmpqrlh6ih1/shed_tool_conf.xml) has been added to the tool_config_file option, if this is not the desired behavior, please set shed_tool_config_file to your primary shed-enabled tool config file
galaxy.tool_util.toolbox.base INFO 2024-02-23 14:21:35,452 [pN:main,p:78505,tN:MainThread] Parsing the tool configuration /tmp/tmpqrlh6ih1/tool_conf.xml
galaxy.tool_util.toolbox.base DEBUG 2024-02-23 14:21:35,453 [pN:main,p:78505,tN:MainThread] Tool path for tool configuration /tmp/tmpqrlh6ih1/tool_conf.xml is None
galaxy.tool_util.toolbox.base DEBUG 2024-02-23 14:21:35,462 [pN:main,p:78505,tN:MainThread] Loaded tool id: upload1, version: 1.1.7 into tool panel..
galaxy.tool_util.toolbox.base DEBUG 2024-02-23 14:21:35,465 [pN:main,p:78505,tN:MainThread] Loaded tool id: ncbi_fcs_adaptor, version: 0.5.0+galaxy0 into tool panel..
galaxy.tools WARNING 2024-02-23 14:21:35,465 [pN:main,p:78505,tN:MainThread] The default shed tool config file (/tmp/tmpqrlh6ih1/shed_tool_conf.xml) has been added to the tool_config_file option, if this is not the desired behavior, please set shed_tool_config_file to your primary shed-enabled tool config file
galaxy.tool_util.toolbox.base INFO 2024-02-23 14:21:35,465 [pN:main,p:78505,tN:MainThread] Parsing the tool configuration /tmp/tmpqrlh6ih1/shed_tools_conf.xml
galaxy.tool_util.toolbox.base DEBUG 2024-02-23 14:21:35,465 [pN:main,p:78505,tN:MainThread] Tool path for shed tool configuration /tmp/tmpqrlh6ih1/shed_tools_conf.xml is /tmp/tmpqrlh6ih1/shed_tools
galaxy.tools WARNING 2024-02-23 14:21:35,465 [pN:main,p:78505,tN:MainThread] The default shed tool config file (/tmp/tmpqrlh6ih1/shed_tool_conf.xml) has been added to the tool_config_file option, if this is not the desired behavior, please set shed_tool_config_file to your primary shed-enabled tool config file
galaxy.tool_util.toolbox.base INFO 2024-02-23 14:21:35,466 [pN:main,p:78505,tN:MainThread] Parsing the tool configuration /tmp/tmpqrlh6ih1/empty_tool_conf.xml
galaxy.tool_util.toolbox.base DEBUG 2024-02-23 14:21:35,466 [pN:main,p:78505,tN:MainThread] Tool path for tool configuration /tmp/tmpqrlh6ih1/empty_tool_conf.xml is None
galaxy.tool_util.toolbox.base DEBUG 2024-02-23 14:21:35,466 [pN:main,p:78505,tN:MainThread] Reading tools from config files finished (13.784 ms)
galaxy.tool_util.toolbox.base DEBUG 2024-02-23 14:21:35,468 [pN:main,p:78505,tN:MainThread] Loaded tool id: upload1, version: 1.1.7 into tool panel..
galaxy.tool_util.toolbox.views.edam DEBUG 2024-02-23 14:21:35,468 [pN:main,p:78505,tN:MainThread] Loading EDAM tool panel finished (1.469 ms)
galaxy.tool_util.toolbox.base DEBUG 2024-02-23 14:21:35,469 [pN:main,p:78505,tN:MainThread] Loaded tool id: upload1, version: 1.1.7 into tool panel..
galaxy.tool_util.toolbox.views.edam DEBUG 2024-02-23 14:21:35,469 [pN:main,p:78505,tN:MainThread] Loading EDAM tool panel finished (1.281 ms)
galaxy.tool_util.toolbox.integrated_panel DEBUG 2024-02-23 14:21:35,469 [pN:main,p:78505,tN:MainThread] Writing integrated tool panel config file to '/tmp/tmpqrlh6ih1/integrated_tool_panel_conf.xml'
galaxy.util ERROR 2024-02-23 14:21:35,925 [pN:main,p:78505,tN:MainThread] Error parsing file /tmp/tmpqrlh6ih1
Traceback (most recent call last):
  File "/scratch/rico/galaxy/lib/galaxy/util/__init__.py", line 305, in parse_xml
    tree = etree.parse(str(fname), parser=parser)
  File "src/lxml/etree.pyx", line 3541, in lxml.etree.parse
  File "src/lxml/parser.pxi", line 1879, in lxml.etree._parseDocument
  File "src/lxml/parser.pxi", line 1905, in lxml.etree._parseDocumentFromURL
  File "src/lxml/parser.pxi", line 1808, in lxml.etree._parseDocFromFile
  File "src/lxml/parser.pxi", line 1180, in lxml.etree._BaseParser._parseDocFromFile
  File "src/lxml/parser.pxi", line 618, in lxml.etree._ParserContext._handleParseResultDoc
  File "src/lxml/parser.pxi", line 728, in lxml.etree._handleParseResult
  File "src/lxml/parser.pxi", line 657, in lxml.etree._raiseParseError
  File "/tmp/tmpqrlh6ih1", line 1
lxml.etree.XMLSyntaxError: Document is empty, line 1, column 1
galaxy.tools.data_manager.manager ERROR 2024-02-23 14:21:35,926 [pN:main,p:78505,tN:MainThread] There was an error parsing your Data Manager config file "/tmp/tmpqrlh6ih1": Document is empty, line 1, column 1 (tmpqrlh6ih1, line 1)
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,927 [pN:main,p:78505,tN:MainThread] Loaded display application 'ucsc_bam' for datatype 'bam', inherit=False.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,928 [pN:main,p:78505,tN:MainThread] Loaded display application 'ensembl_bam' for datatype 'bam', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-02-23 14:21:35,929 [pN:main,p:78505,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "igv_broad_genomes".
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,930 [pN:main,p:78505,tN:MainThread] Loaded display application 'igv_bam' for datatype 'bam', inherit=False.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,930 [pN:main,p:78505,tN:MainThread] Loaded display application 'igb_bam' for datatype 'bam', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-02-23 14:21:35,930 [pN:main,p:78505,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "bam_iobio".
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,930 [pN:main,p:78505,tN:MainThread] Loaded display application 'iobio_bam' for datatype 'bam', inherit=False.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,931 [pN:main,p:78505,tN:MainThread] Loaded display application 'igb_bed' for datatype 'bed', inherit=False.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,931 [pN:main,p:78505,tN:MainThread] Loaded display application 'igb_bedgraph' for datatype 'bedgraph', inherit=False.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,932 [pN:main,p:78505,tN:MainThread] Loaded display application 'ucsc_bigbed' for datatype 'bigbed', inherit=False.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,932 [pN:main,p:78505,tN:MainThread] Loaded display application 'igb_bb' for datatype 'bigbed', inherit=False.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,932 [pN:main,p:78505,tN:MainThread] Loaded display application 'ucsc_bigwig' for datatype 'bigwig', inherit=False.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,933 [pN:main,p:78505,tN:MainThread] Loaded display application 'igb_bigwig' for datatype 'bigwig', inherit=False.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,933 [pN:main,p:78505,tN:MainThread] Loaded display application 'igv_bigwig' for datatype 'bigwig', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-02-23 14:21:35,933 [pN:main,p:78505,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "intermine_simple_display".
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,933 [pN:main,p:78505,tN:MainThread] Loaded display application 'intermine_simple' for datatype 'intermine_tabular', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-02-23 14:21:35,934 [pN:main,p:78505,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "igv_broad_genomes".
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,934 [pN:main,p:78505,tN:MainThread] Loaded display application 'igv_fasta' for datatype 'fasta', inherit=True.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,935 [pN:main,p:78505,tN:MainThread] Loaded display application 'ensembl_gff' for datatype 'gff', inherit=True.
galaxy.datatypes.display_applications.application ERROR 2024-02-23 14:21:35,936 [pN:main,p:78505,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "igv_broad_genomes".
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,936 [pN:main,p:78505,tN:MainThread] Loaded display application 'igv_gff' for datatype 'gff', inherit=True.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,936 [pN:main,p:78505,tN:MainThread] Loaded display application 'igb_gtf' for datatype 'gtf', inherit=False.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,937 [pN:main,p:78505,tN:MainThread] Loaded display application 'ensembl_interval' for datatype 'interval', inherit=True.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,938 [pN:main,p:78505,tN:MainThread] Loaded display application 'gbrowse_interval_as_bed' for datatype 'interval', inherit=True.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,939 [pN:main,p:78505,tN:MainThread] Loaded display application 'rviewer_interval' for datatype 'interval', inherit=True.
galaxy.datatypes.display_applications.application ERROR 2024-02-23 14:21:35,939 [pN:main,p:78505,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "igv_broad_genomes".
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,939 [pN:main,p:78505,tN:MainThread] Loaded display application 'igv_interval_as_bed' for datatype 'interval', inherit=True.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,939 [pN:main,p:78505,tN:MainThread] Loaded display application 'avivator' for datatype 'ome.tiff', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-02-23 14:21:35,940 [pN:main,p:78505,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "q2view_display".
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,940 [pN:main,p:78505,tN:MainThread] Loaded display application 'q2view' for datatype 'qza', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-02-23 14:21:35,940 [pN:main,p:78505,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "q2view_display".
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,940 [pN:main,p:78505,tN:MainThread] Loaded display application 'q2view' for datatype 'qzv', inherit=False.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,940 [pN:main,p:78505,tN:MainThread] Loaded display application 'ucsc_maf_customtrack' for datatype 'mafcustomtrack', inherit=False.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,941 [pN:main,p:78505,tN:MainThread] Loaded display application 'minerva_tabular' for datatype 'tabular', inherit=False.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,941 [pN:main,p:78505,tN:MainThread] Loaded display application 'ucsc_vcf' for datatype 'vcf', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-02-23 14:21:35,942 [pN:main,p:78505,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "igv_broad_genomes".
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,942 [pN:main,p:78505,tN:MainThread] Loaded display application 'igv_vcf' for datatype 'vcf', inherit=False.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,942 [pN:main,p:78505,tN:MainThread] Loaded display application 'rviewer_vcf' for datatype 'vcf', inherit=True.
galaxy.datatypes.display_applications.application ERROR 2024-02-23 14:21:35,942 [pN:main,p:78505,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "vcf_iobio".
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,942 [pN:main,p:78505,tN:MainThread] Loaded display application 'iobio_vcf' for datatype 'vcf', inherit=False.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,943 [pN:main,p:78505,tN:MainThread] Loaded display application 'igb_wig' for datatype 'wig', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-02-23 14:21:35,943 [pN:main,p:78505,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "igv_broad_genomes".
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,943 [pN:main,p:78505,tN:MainThread] Loaded display application 'igv_vcf' for datatype 'vcf_bgzip', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-02-23 14:21:35,944 [pN:main,p:78505,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "igv_broad_genomes".
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,944 [pN:main,p:78505,tN:MainThread] Loaded display application 'igv_genbank' for datatype 'genbank', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-02-23 14:21:35,944 [pN:main,p:78505,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "biom_simple_display".
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,944 [pN:main,p:78505,tN:MainThread] Loaded display application 'biom_simple' for datatype 'biom1', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-02-23 14:21:35,944 [pN:main,p:78505,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "icn3d_simple_display".
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,944 [pN:main,p:78505,tN:MainThread] Loaded display application 'icn3d_simple' for datatype 'sdf', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-02-23 14:21:35,945 [pN:main,p:78505,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "icn3d_simple_display".
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,945 [pN:main,p:78505,tN:MainThread] Loaded display application 'icn3d_simple' for datatype 'mol2', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-02-23 14:21:35,945 [pN:main,p:78505,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "icn3d_simple_display".
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,945 [pN:main,p:78505,tN:MainThread] Loaded display application 'icn3d_simple' for datatype 'pdb', inherit=False.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,945 [pN:main,p:78505,tN:MainThread] Loaded display application 'ucsc_trackhub' for datatype 'trackhub', inherit=False.
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,945 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'bed'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,945 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'bed'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,945 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'bed'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,945 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'bed'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,945 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'bedgraph'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,945 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'bedgraph'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,945 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'bedgraph'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,945 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'bedgraph'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,945 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'bedstrict'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'bedstrict'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'bedstrict'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'bedstrict'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'bed6'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'bed6'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'bed6'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'bed6'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'bed12'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'bed12'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'bed12'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'bed12'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'probed'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'probed'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'probed'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'probed'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'chrint'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'chrint'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'chrint'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'chrint'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'igv_fasta' to datatype 'fasta.gz'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'ensembl_gff' to datatype 'gff3'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'igv_gff' to datatype 'gff3'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'ensembl_gff' to datatype 'gff3.gz'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'igv_gff' to datatype 'gff3.gz'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'ensembl_gff' to datatype 'gff3.bz2'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'igv_gff' to datatype 'gff3.bz2'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,946 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'ensembl_gff' to datatype 'gtf'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,947 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'igv_gff' to datatype 'gtf'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,947 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'encodepeak'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,947 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'encodepeak'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,948 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'encodepeak'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,948 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'encodepeak'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,948 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'igv_fasta' to datatype 'sequences'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,948 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'interval_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,948 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'interval_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,948 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'interval_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,948 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'interval_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,948 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'juicer_medium_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,948 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'juicer_medium_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,948 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'juicer_medium_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,948 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'juicer_medium_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,948 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'bed_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,948 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'bed_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,948 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'bed_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,948 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'bed_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,948 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'gff_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,948 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'gff_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,948 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'gff_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,948 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'gff_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,949 [pN:main,p:78505,tN:MainThread] Adding inherited display application 'igv_fasta' to datatype 'mothur.align'
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,952 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,953 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,954 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,955 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,957 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,958 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,959 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_Bam_Bai_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,960 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bam_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,961 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bam_to_qname_sorted_bam
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,962 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bam_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,963 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bam_to_coodinate_sorted_bam
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,964 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bam_to_qname_sorted_bam
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,965 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_cram_to_bam_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,966 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bed_to_gff_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,968 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_interval_to_bgzip_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,970 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_interval_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,971 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bed_gff_or_vcf_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,972 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bed_to_fli_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,973 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bedgraph_to_bigwig
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,974 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_len_to_linecount
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,975 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_parquet_to_csv
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,977 [pN:main,p:78505,tN:MainThread] Loaded converter: bigwigtowig
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,980 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_interval_to_bgzip_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,982 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_interval_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,983 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bed_gff_or_vcf_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,984 [pN:main,p:78505,tN:MainThread] Loaded converter: csv_to_tabular
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,985 [pN:main,p:78505,tN:MainThread] Loaded converter: tabular_to_csv
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,986 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_fasta_to_tabular
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,987 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_fasta_to_bowtie_base_index
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,988 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_fasta_to_bowtie_color_index
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,989 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_fasta_to_2bit
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,990 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_fasta_to_len
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,991 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_fasta_to_fai
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,992 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,993 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,994 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_fastq_to_fqtoc0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,996 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,997 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,998 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bz2_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:35,999 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_fastq_to_fqtoc0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,000 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,001 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,002 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bz2_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,003 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_fastq_to_fqtoc0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,005 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,006 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,007 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bz2_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,008 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_fastq_to_fqtoc0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,010 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,011 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,012 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bz2_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,013 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_fastq_to_fqtoc0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,015 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,016 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,017 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bz2_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,018 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_gff_to_bed_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,019 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_gff_to_interval_index_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,020 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bed_gff_or_vcf_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,021 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_gff_to_fli_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,023 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_interval_to_bgzip_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,025 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_interval_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,026 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,027 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,029 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bz2_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,029 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_gff_to_interval_index_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,030 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bed_gff_or_vcf_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,031 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_interval_to_bed_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,032 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_interval_to_bedstrict_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,033 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_interval_to_bed6_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,034 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_interval_to_bed12_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,037 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_interval_to_bgzip_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,039 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_interval_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,040 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_interval_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,041 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_picard_interval_list_to_bed6
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,042 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_tar_to_directory
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,043 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,044 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,046 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,047 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,048 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,049 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,050 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_maf_to_fasta_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,051 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_maf_to_interval_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,053 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_interval_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,056 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_interval_to_bgzip_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,057 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bed_gff_or_vcf_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,059 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_interval_to_bgzip_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,061 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_interval_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,062 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_sam_to_unsorted_bam
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,063 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bam_to_coodinate_sorted_bam
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,064 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bam_to_qname_sorted_bam
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,065 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_sam_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,066 [pN:main,p:78505,tN:MainThread] Loaded converter: tabular_to_dbnsfp
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,067 [pN:main,p:78505,tN:MainThread] Loaded converter: tabular_to_csv
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,069 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,070 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,072 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_interval_to_bgzip_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,073 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_vcf_to_vcf_bgzip_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,075 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_interval_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,076 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bed_gff_or_vcf_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,078 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,079 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bcf_uncompressed_to_bcf
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,080 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_bcf_uncompressed_to_bcf
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,081 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_wig_to_bigwig
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,082 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_wiggle_to_interval_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,084 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_vcf_bgzip_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,085 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,085 [pN:main,p:78505,tN:MainThread] Loaded converter: lped2fpedconvert
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,086 [pN:main,p:78505,tN:MainThread] Loaded converter: lped2pbedconvert
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,087 [pN:main,p:78505,tN:MainThread] Loaded converter: pbed2lpedconvert
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,088 [pN:main,p:78505,tN:MainThread] Loaded converter: pbed2ldindepconvert
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,089 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,091 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,092 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_biom
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,094 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_biom
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,099 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,104 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,109 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,110 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_SMILES_to_MOL
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,115 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,116 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_smiles_to_smiles
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,121 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,126 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,131 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,136 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,141 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,146 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,147 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_inchi_to_mol
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,152 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,157 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,163 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,168 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,173 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,178 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,183 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,188 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,193 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,198 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,199 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_mol2_to_mol
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,204 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,206 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_cml_to_smiles
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,211 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,216 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,221 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,223 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_Pdb_to_Gro_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,224 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_mdconvert
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,226 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_mdconvert
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,228 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_mdconvert
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,231 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_mdconvert
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,233 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_mdconvert
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,235 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_mdconvert
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,236 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_Gro_to_Pdb_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,237 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_ref_to_seq_taxomony
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,238 [pN:main,p:78505,tN:MainThread] Loaded converter: CONVERTER_neostorezip_to_neostore
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:36,240 [pN:main,p:78505,tN:MainThread] Loaded external metadata tool: __SET_METADATA__
galaxy.tools.special_tools DEBUG 2024-02-23 14:21:36,241 [pN:main,p:78505,tN:MainThread] Loaded history export tool: __EXPORT_HISTORY__
galaxy.tools.special_tools DEBUG 2024-02-23 14:21:36,242 [pN:main,p:78505,tN:MainThread] Loaded history export to uri tool: __EXPORT_HISTORY_TO_URI__
galaxy.tools.special_tools DEBUG 2024-02-23 14:21:36,243 [pN:main,p:78505,tN:MainThread] Loaded history import tool: __IMPORT_HISTORY__
galaxy.tools.special_tools DEBUG 2024-02-23 14:21:36,244 [pN:main,p:78505,tN:MainThread] Loaded data fetch tool: __DATA_FETCH__
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,245 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: PCA_3Dplot
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,246 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: aequatus
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,247 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: annotate_image
galaxy.visualization.plugins.config_parser INFO 2024-02-23 14:21:36,248 [pN:main,p:78505,tN:MainThread] template syntax is deprecated: use entry_point instead
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,248 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: chiraviz
galaxy.visualization.plugins.config_parser INFO 2024-02-23 14:21:36,249 [pN:main,p:78505,tN:MainThread] Visualizations plugin disabled: Circster. Skipping...
galaxy.visualization.plugins.config_parser INFO 2024-02-23 14:21:36,249 [pN:main,p:78505,tN:MainThread] template syntax is deprecated: use entry_point instead
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,249 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: csg
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,250 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: cytoscape
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,251 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: drawrna
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,252 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: editor
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,253 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: example
galaxy.visualization.plugins.config_parser INFO 2024-02-23 14:21:36,254 [pN:main,p:78505,tN:MainThread] template syntax is deprecated: use entry_point instead
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,255 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: fits_image_viewer
galaxy.visualization.plugins.config_parser INFO 2024-02-23 14:21:36,256 [pN:main,p:78505,tN:MainThread] template syntax is deprecated: use entry_point instead
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,256 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: graphviz
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,256 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: h5web
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,259 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: heatmap_cluster
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,261 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: heatmap_default
galaxy.visualization.plugins.config_parser INFO 2024-02-23 14:21:36,261 [pN:main,p:78505,tN:MainThread] template syntax is deprecated: use entry_point instead
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,261 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: hivtrace
galaxy.visualization.plugins.config_parser INFO 2024-02-23 14:21:36,262 [pN:main,p:78505,tN:MainThread] template syntax is deprecated: use entry_point instead
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,262 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: hyphyvision
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,264 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: jqplot_bar
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,267 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: jqplot_box
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,269 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: jqplot_histogram
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,271 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: jqplot_line
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,273 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: jqplot_scatter
galaxy.visualization.plugins.config_parser INFO 2024-02-23 14:21:36,273 [pN:main,p:78505,tN:MainThread] template syntax is deprecated: use entry_point instead
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,273 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: audio_player
galaxy.visualization.plugins.config_parser INFO 2024-02-23 14:21:36,274 [pN:main,p:78505,tN:MainThread] template syntax is deprecated: use entry_point instead
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,274 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: video_player
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,274 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: msa
galaxy.visualization.plugins.config_parser INFO 2024-02-23 14:21:36,275 [pN:main,p:78505,tN:MainThread] template syntax is deprecated: use entry_point instead
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,276 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: mvpapp
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,277 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: ngl
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,278 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: nora
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,280 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_bar
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,282 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_bar_stacked
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,284 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_histogram
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,286 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_histogram_discrete
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,288 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_horizontal
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,290 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_horizontal_stacked
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,292 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_line
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,294 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_line_focus
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,296 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_pie
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,298 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_scatter
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,300 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_stackedarea
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,302 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_stackedarea_full
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,304 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_stackedarea_stream
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,305 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: openlayers
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,306 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: openseadragon
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,307 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: phylocanvas
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,308 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: phyloviz
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,309 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: pv
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,310 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: scatterplot
galaxy.visualization.plugins.config_parser INFO 2024-02-23 14:21:36,310 [pN:main,p:78505,tN:MainThread] Visualizations plugin disabled: Sweepster. Skipping...
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,311 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: trackster
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,311 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: ts_visjs
galaxy.visualization.plugins.config_parser INFO 2024-02-23 14:21:36,312 [pN:main,p:78505,tN:MainThread] template syntax is deprecated: use entry_point instead
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,312 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: unipept
galaxy.visualization.plugins.registry INFO 2024-02-23 14:21:36,312 [pN:main,p:78505,tN:MainThread] VisualizationsRegistry, loaded plugin: venn
galaxy.tours._impl INFO 2024-02-23 14:21:36,337 [pN:main,p:78505,tN:MainThread] Loaded tour 'core.galaxy_ui'
galaxy.tours._impl INFO 2024-02-23 14:21:36,354 [pN:main,p:78505,tN:MainThread] Loaded tour 'core.deferred'
galaxy.tours._impl INFO 2024-02-23 14:21:36,366 [pN:main,p:78505,tN:MainThread] Loaded tour 'core.history'
galaxy.tours._impl INFO 2024-02-23 14:21:36,377 [pN:main,p:78505,tN:MainThread] Loaded tour 'core.windows'
galaxy.workflow.scheduling_manager INFO 2024-02-23 14:21:36,383 [pN:main,p:78505,tN:MainThread] No workflow schedulers plugin config file defined, using default scheduler.
galaxy.web_stack.handlers INFO 2024-02-23 14:21:36,383 [pN:main,p:78505,tN:MainThread] WorkflowSchedulingManager: No job handler assignment method is set, defaulting to 'HANDLER_ASSIGNMENT_METHODS.DB_SKIP_LOCKED', set the `assign_with` attribute on <handlers> to override the default
galaxy.workflow.scheduling_manager DEBUG 2024-02-23 14:21:36,384 [pN:main,p:78505,tN:MainThread] Starting workflow schedulers
galaxy.app INFO 2024-02-23 14:21:36,386 [pN:main,p:78505,tN:MainThread] Galaxy app startup finished (2552.949 ms)
galaxy.web.framework.base DEBUG 2024-02-23 14:21:36,413 [pN:main,p:78505,tN:MainThread] Enabling 'user' controller, class: User
galaxy.web.framework.base DEBUG 2024-02-23 14:21:36,414 [pN:main,p:78505,tN:MainThread] Enabling 'data_manager' controller, class: DataManager
galaxy.web.framework.base DEBUG 2024-02-23 14:21:36,415 [pN:main,p:78505,tN:MainThread] Enabling 'async' controller, class: ASync
galaxy.web.framework.base DEBUG 2024-02-23 14:21:36,415 [pN:main,p:78505,tN:MainThread] Enabling 'tag' controller, class: TagsController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:36,420 [pN:main,p:78505,tN:MainThread] Enabling 'page' controller, class: PageController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:36,421 [pN:main,p:78505,tN:MainThread] Enabling 'root' controller, class: RootController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:36,421 [pN:main,p:78505,tN:MainThread] Enabling 'tool_runner' controller, class: ToolRunner
galaxy.web.framework.base DEBUG 2024-02-23 14:21:36,422 [pN:main,p:78505,tN:MainThread] Enabling 'error' controller, class: Error
galaxy.web.framework.base DEBUG 2024-02-23 14:21:36,423 [pN:main,p:78505,tN:MainThread] Enabling 'forms' controller, class: Forms
galaxy.web.framework.base DEBUG 2024-02-23 14:21:36,437 [pN:main,p:78505,tN:MainThread] Enabling 'admin_toolshed' controller, class: AdminGalaxy
galaxy.web.framework.base DEBUG 2024-02-23 14:21:36,438 [pN:main,p:78505,tN:MainThread] Enabling 'admin_toolshed' controller, class: AdminToolshed
galaxy.web.framework.base DEBUG 2024-02-23 14:21:36,439 [pN:main,p:78505,tN:MainThread] Enabling 'visualization' controller, class: VisualizationController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:36,440 [pN:main,p:78505,tN:MainThread] Enabling 'shed_tool_static' controller, class: ShedToolStatic
galaxy.web.framework.base DEBUG 2024-02-23 14:21:36,440 [pN:main,p:78505,tN:MainThread] Enabling 'authnz' controller, class: JSAppLauncher
galaxy.web.framework.base DEBUG 2024-02-23 14:21:36,441 [pN:main,p:78505,tN:MainThread] Enabling 'authnz' controller, class: OIDC
galaxy.web.framework.base DEBUG 2024-02-23 14:21:36,442 [pN:main,p:78505,tN:MainThread] Enabling 'workflow' controller, class: WorkflowController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:36,444 [pN:main,p:78505,tN:MainThread] Enabling 'history' controller, class: HistoryController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:36,474 [pN:main,p:78505,tN:MainThread] Enabling 'dataset' controller, class: DatasetInterface
galaxy.web.framework.base DEBUG 2024-02-23 14:21:36,474 [pN:main,p:78505,tN:MainThread] Enabling 'admin' controller, class: AdminGalaxy
galaxy.web.framework.base DEBUG 2024-02-23 14:21:37,175 [pN:main,p:78505,tN:MainThread] Enabling 'library_datasets' API controller, class: LibraryDatasetsController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:37,328 [pN:main,p:78505,tN:MainThread] Enabling 'jobs' API controller, class: JobController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:37,448 [pN:main,p:78505,tN:MainThread] Enabling 'job_files' API controller, class: JobFilesAPIController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:37,495 [pN:main,p:78505,tN:MainThread] Enabling 'toolshed' API controller, class: ToolShedController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:37,511 [pN:main,p:78505,tN:MainThread] Enabling 'tools' API controller, class: ToolsController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:37,632 [pN:main,p:78505,tN:MainThread] Enabling 'trs_consumer' API controller, class: TrsConsumeAPIController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:37,633 [pN:main,p:78505,tN:MainThread] Enabling 'history_dataset_extended_metadata' API controller, class: HistoryDatasetExtendMetadataController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:37,633 [pN:main,p:78505,tN:MainThread] Enabling 'library_dataset_extended_metadata' API controller, class: LibraryDatasetExtendMetadataController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:37,634 [pN:main,p:78505,tN:MainThread] Enabling 'container_resolution' API controller, class: ContainerResolutionAPIController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:37,634 [pN:main,p:78505,tN:MainThread] Enabling 'job_ports' API controller, class: JobPortsAPIController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:37,635 [pN:main,p:78505,tN:MainThread] Enabling 'tool_dependencies' API controller, class: ToolDependenciesAPIController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:37,775 [pN:main,p:78505,tN:MainThread] Enabling 'history_content_provenance' API controller, class: HDAProvenanceController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:37,775 [pN:main,p:78505,tN:MainThread] Enabling 'ldda_provenance' API controller, class: LDDAProvenanceController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:37,775 [pN:main,p:78505,tN:MainThread] Enabling 'tool_entry_points' API controller, class: ToolEntryPointsAPIController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:37,909 [pN:main,p:78505,tN:MainThread] Enabling 'authenticate' API controller, class: AuthenticationController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:38,315 [pN:main,p:78505,tN:MainThread] Enabling 'trs_search' API controller, class: TrsSearchAPIController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:38,366 [pN:main,p:78505,tN:MainThread] Enabling 'tool_shed_repositories' API controller, class: ToolShedRepositoriesController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:38,547 [pN:main,p:78505,tN:MainThread] Enabling 'forms' API controller, class: FormDefinitionAPIController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:38,735 [pN:main,p:78505,tN:MainThread] Enabling 'workflows' API controller, class: WorkflowsAPIController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:38,735 [pN:main,p:78505,tN:MainThread] Enabling 'uploads' API controller, class: UploadsAPIController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:39,227 [pN:main,p:78505,tN:MainThread] Enabling 'history_annotations' API controller, class: HistoryAnnotationsController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:39,227 [pN:main,p:78505,tN:MainThread] Enabling 'history_content_annotations' API controller, class: HistoryContentAnnotationsController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:39,228 [pN:main,p:78505,tN:MainThread] Enabling 'workflow_annotations' API controller, class: WorkflowAnnotationsController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:39,272 [pN:main,p:78505,tN:MainThread] Enabling 'visualizations' API controller, class: VisualizationsController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:39,273 [pN:main,p:78505,tN:MainThread] Enabling 'sanitize_allow' API controller, class: SanitizeAllowController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:39,273 [pN:main,p:78505,tN:MainThread] Enabling 'page_revisions' API controller, class: PageRevisionsController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:39,345 [pN:main,p:78505,tN:MainThread] Enabling 'library_contents' API controller, class: LibraryContentsController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:39,463 [pN:main,p:78505,tN:MainThread] Enabling 'users' API controller, class: UserAPIController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:39,463 [pN:main,p:78505,tN:MainThread] Enabling 'cloudauthz' API controller, class: CloudAuthzController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:39,464 [pN:main,p:78505,tN:MainThread] Enabling 'webhooks' API controller, class: WebhooksController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:39,538 [pN:main,p:78505,tN:MainThread] Enabling 'plugins' API controller, class: PluginsController
galaxy.web.framework.base DEBUG 2024-02-23 14:21:39,573 [pN:main,p:78505,tN:MainThread] Enabling 'dynamic_tools' API controller, class: DynamicToolsController
2024-02-23 14:21:39,857 INFO success: celery entered RUNNING state, process has stayed up for > than 10 seconds (startsecs)
galaxy.webapps.util DEBUG 2024-02-23 14:21:39,857 [pN:main,p:78505,tN:MainThread] Enabling 'paste.httpexceptions' middleware
2024-02-23 14:21:39,858 INFO success: celery-beat entered RUNNING state, process has stayed up for > than 10 seconds (startsecs)
galaxy.webapps.util DEBUG 2024-02-23 14:21:39,857 [pN:main,p:78505,tN:MainThread] Enabling 'RemoteUser' middleware
galaxy.webapps.util DEBUG 2024-02-23 14:21:39,857 [pN:main,p:78505,tN:MainThread] Enabling 'ErrorMiddleware' middleware
galaxy.webapps.util DEBUG 2024-02-23 14:21:39,857 [pN:main,p:78505,tN:MainThread] Enabling 'TusMiddleware' middleware
galaxy.webapps.util DEBUG 2024-02-23 14:21:39,857 [pN:main,p:78505,tN:MainThread] Enabling 'XForwardedHostMiddleware' middleware
galaxy.webapps.util DEBUG 2024-02-23 14:21:39,857 [pN:main,p:78505,tN:MainThread] Enabling 'RequestIDMiddleware' middleware
galaxy.webapps.util DEBUG 2024-02-23 14:21:39,857 [pN:main,p:78505,tN:MainThread] Enabling 'build_url_map' middleware
galaxy.webapps.galaxy.buildapp DEBUG 2024-02-23 14:21:39,858 [pN:main,p:78505,tN:MainThread] Prior to webapp return, Galaxy thread <_MainThread(MainThread, started 139838623614784)> is alive.
/scratch/rico/galaxy/lib/galaxy/webapps/openapi/utils.py:463: UserWarning: Merging operation with id fetch_json_api_tools_fetch_post with operation with id fetch_form_api_tools_fetch_post.
  warnings.warn(message)  # noqa: B028
[2024-02-23 14:21:41 -0500] [78505] [INFO] Starting gunicorn 21.2.0
[2024-02-23 14:21:41 -0500] [78505] [INFO] Listening at: http://127.0.0.1:9090 (78505)
[2024-02-23 14:21:41 -0500] [78505] [INFO] Using worker: galaxy.webapps.galaxy.workers.Worker
[2024-02-23 14:21:41 -0500] [78709] [INFO] Booting worker with pid: 78709
galaxy.web_stack DEBUG 2024-02-23 14:21:41,492 [pN:main.1,p:78709,tN:Thread-2] server_name set to: main.1
galaxy.jobs.manager DEBUG 2024-02-23 14:21:41,493 [pN:main.1,p:78709,tN:Thread-2] Initializing job handler
galaxy.jobs INFO 2024-02-23 14:21:41,494 [pN:main.1,p:78709,tN:Thread-2] Handler 'main.1' will load all configured runner plugins
galaxy.jobs.runners.state_handler_factory DEBUG 2024-02-23 14:21:41,509 [pN:main.1,p:78709,tN:Thread-2] Loaded 'failure' state handler from module galaxy.jobs.runners.state_handlers.resubmit
galaxy.jobs DEBUG 2024-02-23 14:21:41,509 [pN:main.1,p:78709,tN:Thread-2] Loaded job runner 'galaxy.jobs.runners.local:LocalJobRunner' as 'local'
galaxy.jobs.handler DEBUG 2024-02-23 14:21:41,509 [pN:main.1,p:78709,tN:Thread-2] Loaded job runners plugins: local
galaxy.jobs.runners DEBUG 2024-02-23 14:21:41,510 [pN:main.1,p:78709,tN:Thread-2] Starting 4 LocalRunner workers
galaxy.jobs.handler DEBUG 2024-02-23 14:21:41,514 [pN:main.1,p:78709,tN:Thread-2] Handler queue starting for jobs assigned to handler: main.1
galaxy.jobs.handler INFO 2024-02-23 14:21:41,546 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] Handler job grabber initialized with 'HANDLER_ASSIGNMENT_METHODS.DB_SKIP_LOCKED' assignment method for handler 'main.1', tag(s): 
galaxy.jobs.handler INFO 2024-02-23 14:21:41,546 [pN:main.1,p:78709,tN:Thread-2] job handler queue started
galaxy.jobs.handler INFO 2024-02-23 14:21:41,553 [pN:main.1,p:78709,tN:Thread-2] job handler stop queue started
galaxy.jobs.handler INFO 2024-02-23 14:21:41,556 [pN:main.1,p:78709,tN:WorkflowRequestMonitor.monitor_thread] Handler job grabber initialized with 'HANDLER_ASSIGNMENT_METHODS.DB_SKIP_LOCKED' assignment method for handler 'main.1', tag(s): None, _default_
galaxy.queue_worker INFO 2024-02-23 14:21:41,575 [pN:main.1,p:78709,tN:Thread-2] Binding and starting galaxy control worker for main.1
galaxy.queue_worker DEBUG 2024-02-23 14:21:41,587 [pN:main.1,p:78709,tN:Thread-2] Executing toolbox reload on 'main.1'
galaxy.util WARNING 2024-02-23 14:21:41,644 [pN:main.1,p:78709,tN:Thread-2] directory not found: /scratch/rico/galaxy/lib/galaxy/util/../../../config/plugins/activities
[2024-02-23 14:21:41 -0500] [78709] [INFO] Started server process [78709]
[2024-02-23 14:21:41 -0500] [78709] [INFO] Waiting for application startup.
[2024-02-23 14:21:41 -0500] [78709] [INFO] Application startup complete.
galaxy.tools WARNING 2024-02-23 14:21:41,668 [pN:main.1,p:78709,tN:Thread-2] The default shed tool config file (/tmp/tmpqrlh6ih1/shed_tool_conf.xml) has been added to the tool_config_file option, if this is not the desired behavior, please set shed_tool_config_file to your primary shed-enabled tool config file
galaxy.tool_util.toolbox.base INFO 2024-02-23 14:21:41,668 [pN:main.1,p:78709,tN:Thread-2] Parsing the tool configuration /tmp/tmpqrlh6ih1/tool_conf.xml
galaxy.tool_util.toolbox.base DEBUG 2024-02-23 14:21:41,669 [pN:main.1,p:78709,tN:Thread-2] Tool path for tool configuration /tmp/tmpqrlh6ih1/tool_conf.xml is None
galaxy.tools WARNING 2024-02-23 14:21:41,670 [pN:main.1,p:78709,tN:Thread-2] The default shed tool config file (/tmp/tmpqrlh6ih1/shed_tool_conf.xml) has been added to the tool_config_file option, if this is not the desired behavior, please set shed_tool_config_file to your primary shed-enabled tool config file
galaxy.tool_util.toolbox.base INFO 2024-02-23 14:21:41,670 [pN:main.1,p:78709,tN:Thread-2] Parsing the tool configuration /tmp/tmpqrlh6ih1/shed_tools_conf.xml
galaxy.model.database_heartbeat DEBUG 2024-02-23 14:21:41,678 [pN:main.1,p:78709,tN:database_heartbeart_main.1.thread] main.1 is config watcher
galaxy.tool_util.toolbox.base DEBUG 2024-02-23 14:21:41,679 [pN:main.1,p:78709,tN:Thread-2] Tool path for shed tool configuration /tmp/tmpqrlh6ih1/shed_tools_conf.xml is /tmp/tmpqrlh6ih1/shed_tools
galaxy.tools WARNING 2024-02-23 14:21:41,680 [pN:main.1,p:78709,tN:Thread-2] The default shed tool config file (/tmp/tmpqrlh6ih1/shed_tool_conf.xml) has been added to the tool_config_file option, if this is not the desired behavior, please set shed_tool_config_file to your primary shed-enabled tool config file
galaxy.tool_util.toolbox.base INFO 2024-02-23 14:21:41,680 [pN:main.1,p:78709,tN:Thread-2] Parsing the tool configuration /tmp/tmpqrlh6ih1/empty_tool_conf.xml
galaxy.tool_util.toolbox.base DEBUG 2024-02-23 14:21:41,683 [pN:main.1,p:78709,tN:Thread-2] Tool path for tool configuration /tmp/tmpqrlh6ih1/empty_tool_conf.xml is None
galaxy.tool_util.toolbox.base DEBUG 2024-02-23 14:21:41,684 [pN:main.1,p:78709,tN:Thread-2] Reading tools from config files finished (15.967 ms)
galaxy.tool_util.toolbox.base DEBUG 2024-02-23 14:21:41,684 [pN:main.1,p:78709,tN:Thread-2] Loaded tool id: upload1, version: 1.1.7 into tool panel..
galaxy.tool_util.toolbox.base DEBUG 2024-02-23 14:21:41,684 [pN:main.1,p:78709,tN:Thread-2] Loading tool panel finished (0.472 ms)
galaxy.tool_util.toolbox.base DEBUG 2024-02-23 14:21:41,689 [pN:main.1,p:78709,tN:Thread-2] Loaded tool id: upload1, version: 1.1.7 into tool panel..
galaxy.tool_util.toolbox.views.edam DEBUG 2024-02-23 14:21:41,690 [pN:main.1,p:78709,tN:Thread-2] Loading EDAM tool panel finished (5.481 ms)
galaxy.tool_util.toolbox.base DEBUG 2024-02-23 14:21:41,692 [pN:main.1,p:78709,tN:Thread-2] Loaded tool id: upload1, version: 1.1.7 into tool panel..
galaxy.tool_util.toolbox.views.edam DEBUG 2024-02-23 14:21:41,692 [pN:main.1,p:78709,tN:Thread-2] Loading EDAM tool panel finished (1.670 ms)
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,692 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,692 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,693 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,693 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,693 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,693 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,693 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_Bam_Bai_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,693 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bam_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,693 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bam_to_qname_sorted_bam
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,694 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bam_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,694 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bam_to_coodinate_sorted_bam
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,694 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bam_to_qname_sorted_bam
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,694 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_cram_to_bam_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,695 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bed_to_gff_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,695 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_interval_to_bgzip_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,695 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_interval_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,695 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bed_gff_or_vcf_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,695 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bed_to_fli_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,696 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bedgraph_to_bigwig
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,696 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_len_to_linecount
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,696 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_parquet_to_csv
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,696 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: bigwigtowig
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,696 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_interval_to_bgzip_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,696 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_interval_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,706 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bed_gff_or_vcf_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,706 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: csv_to_tabular
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,707 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: tabular_to_csv
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,707 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_fasta_to_tabular
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,707 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_fasta_to_bowtie_base_index
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,707 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_fasta_to_bowtie_color_index
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,707 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_fasta_to_2bit
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,707 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_fasta_to_len
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,707 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_fasta_to_fai
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,708 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,708 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,708 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_fastq_to_fqtoc0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,708 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,708 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,708 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bz2_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,709 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_fastq_to_fqtoc0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,709 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,709 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,709 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bz2_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,709 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_fastq_to_fqtoc0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,709 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,709 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,710 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bz2_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,710 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_fastq_to_fqtoc0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,710 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,710 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,710 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bz2_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,710 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_fastq_to_fqtoc0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,710 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,710 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,711 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bz2_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,711 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_gff_to_bed_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,711 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_gff_to_interval_index_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,711 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bed_gff_or_vcf_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,711 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_gff_to_fli_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,712 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_interval_to_bgzip_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,712 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_interval_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,712 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,712 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,712 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bz2_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,712 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_gff_to_interval_index_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,713 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bed_gff_or_vcf_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,713 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_interval_to_bed_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,713 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_interval_to_bedstrict_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,713 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_interval_to_bed6_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,713 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_interval_to_bed12_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,713 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_interval_to_bgzip_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,713 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_interval_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,713 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_interval_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,714 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_picard_interval_list_to_bed6
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,714 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_tar_to_directory
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,714 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,714 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,714 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,714 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,714 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,714 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,715 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_maf_to_fasta_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,715 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_maf_to_interval_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,715 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_interval_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,715 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_interval_to_bgzip_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,715 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bed_gff_or_vcf_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,716 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_interval_to_bgzip_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,716 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_interval_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,716 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_sam_to_unsorted_bam
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,716 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bam_to_coodinate_sorted_bam
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,716 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bam_to_qname_sorted_bam
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,716 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_sam_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,717 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: tabular_to_dbnsfp
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,717 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: tabular_to_csv
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,717 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,717 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,717 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_interval_to_bgzip_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,717 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_vcf_to_vcf_bgzip_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,718 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_interval_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,718 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bed_gff_or_vcf_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,718 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,718 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bcf_uncompressed_to_bcf
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,718 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_bcf_uncompressed_to_bcf
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,718 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_wig_to_bigwig
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,718 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_wiggle_to_interval_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,718 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_vcf_bgzip_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,719 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,719 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: lped2fpedconvert
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,719 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: lped2pbedconvert
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,719 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: pbed2lpedconvert
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,739 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: pbed2ldindepconvert
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,739 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,739 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,739 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_biom
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,740 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_biom
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,740 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,740 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,740 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,740 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_SMILES_to_MOL
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,740 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,741 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_smiles_to_smiles
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,741 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,741 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,741 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,741 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,742 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,742 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,742 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_inchi_to_mol
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,742 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,742 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,742 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,743 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,743 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,743 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,743 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,743 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,743 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,744 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,744 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_mol2_to_mol
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,744 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,744 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_cml_to_smiles
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,744 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,744 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,745 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,745 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_Pdb_to_Gro_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,745 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_mdconvert
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,745 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_mdconvert
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,745 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_mdconvert
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,745 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_mdconvert
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,746 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_mdconvert
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,746 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_mdconvert
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,746 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_Gro_to_Pdb_0
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,746 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_ref_to_seq_taxomony
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,746 [pN:main.1,p:78709,tN:Thread-2] Loaded converter: CONVERTER_neostorezip_to_neostore
galaxy.datatypes.registry DEBUG 2024-02-23 14:21:41,751 [pN:main.1,p:78709,tN:Thread-2] Loaded external metadata tool: __SET_METADATA__
galaxy.tools.special_tools DEBUG 2024-02-23 14:21:41,753 [pN:main.1,p:78709,tN:Thread-2] Loaded history export tool: __EXPORT_HISTORY__
galaxy.tools.special_tools DEBUG 2024-02-23 14:21:41,755 [pN:main.1,p:78709,tN:Thread-2] Loaded history export to uri tool: __EXPORT_HISTORY_TO_URI__
galaxy.tools.special_tools DEBUG 2024-02-23 14:21:41,757 [pN:main.1,p:78709,tN:Thread-2] Loaded history import tool: __IMPORT_HISTORY__
galaxy.tools.special_tools DEBUG 2024-02-23 14:21:41,761 [pN:main.1,p:78709,tN:Thread-2] Loaded data fetch tool: __DATA_FETCH__
galaxy.queue_worker INFO 2024-02-23 14:21:41,761 [pN:main.1,p:78709,tN:Thread-2] Queuing async task rebuild_toolbox_search_index for main.1.
galaxy.queue_worker DEBUG 2024-02-23 14:21:41,781 [pN:main.1,p:78709,tN:Thread-2] Toolbox reload (193.942 ms)
galaxy.queue_worker INFO 2024-02-23 14:21:41,781 [pN:main.1,p:78709,tN:Thread-2] Queuing async task rebuild_toolbox_search_index for main.1.
galaxy.web_stack INFO 2024-02-23 14:21:41,792 [pN:main.1,p:78709,tN:Thread-2] Galaxy server instance 'main.1' is running

Serving on http://127.0.0.1:9090

galaxy.queue_worker INFO 2024-02-23 14:21:42,781 [pN:main.1,p:78709,tN:Thread-1] Instance 'main.1' received 'rebuild_toolbox_search_index' task, executing now.
galaxy.tools.search DEBUG 2024-02-23 14:21:42,782 [pN:main.1,p:78709,tN:Thread-1] Starting to build toolbox index of panel default.
galaxy.tools.search DEBUG 2024-02-23 14:21:42,791 [pN:main.1,p:78709,tN:Thread-1] Toolbox index of panel default finished (9.312 ms)
galaxy.tools.search DEBUG 2024-02-23 14:21:42,791 [pN:main.1,p:78709,tN:Thread-1] Starting to build toolbox index of panel ontology:edam_operations.
galaxy.tools.search DEBUG 2024-02-23 14:21:42,795 [pN:main.1,p:78709,tN:Thread-1] Toolbox index of panel ontology:edam_operations finished (3.894 ms)
galaxy.tools.search DEBUG 2024-02-23 14:21:42,796 [pN:main.1,p:78709,tN:Thread-1] Starting to build toolbox index of panel ontology:edam_topics.
galaxy.tools.search DEBUG 2024-02-23 14:21:42,799 [pN:main.1,p:78709,tN:Thread-1] Toolbox index of panel ontology:edam_topics finished (3.529 ms)
galaxy.queue_worker INFO 2024-02-23 14:21:42,808 [pN:main.1,p:78709,tN:Thread-1] Instance 'main.1' received 'rebuild_toolbox_search_index' task, executing now.
galaxy.tools.search DEBUG 2024-02-23 14:21:42,808 [pN:main.1,p:78709,tN:Thread-1] Starting to build toolbox index of panel default.
galaxy.tools.search DEBUG 2024-02-23 14:21:42,811 [pN:main.1,p:78709,tN:Thread-1] Toolbox index of panel default finished (3.266 ms)
galaxy.tools.search DEBUG 2024-02-23 14:21:42,811 [pN:main.1,p:78709,tN:Thread-1] Starting to build toolbox index of panel ontology:edam_operations.
galaxy.tools.search DEBUG 2024-02-23 14:21:42,815 [pN:main.1,p:78709,tN:Thread-1] Toolbox index of panel ontology:edam_operations finished (3.321 ms)
galaxy.tools.search DEBUG 2024-02-23 14:21:42,815 [pN:main.1,p:78709,tN:Thread-1] Starting to build toolbox index of panel ontology:edam_topics.
galaxy.tools.search DEBUG 2024-02-23 14:21:42,818 [pN:main.1,p:78709,tN:Thread-1] Toolbox index of panel ontology:edam_topics finished (3.186 ms)
2024-02-23 14:21:45,822 INFO success: gunicorn entered RUNNING state, process has stayed up for > than 15 seconds (startsecs)

==> /tmp/tmpqrlh6ih1/gravity/log/celery-beat.log <==
[2024-02-23 14:26:34,191: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-02-23 14:26:34,192: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /tmp/tmpqrlh6ih1/gravity/log/gunicorn.log <==
galaxy.webapps.base.webapp DEBUG 2024-02-23 14:29:47,081 [pN:main.1,p:78709,tN:WSGI_0] Received invalid session key '{secure_id}', setting a new session key
/scratch/rico/galaxy/lib/galaxy/managers/users.py:854: SAWarning: Dialect sqlite+pysqlite does *not* support Decimal objects natively, and SQLAlchemy must convert from floating point - rounding errors and other issues may occur. Please consider storing Decimal numbers as strings or integers on this platform for lossless storage.
  return session.scalars(stmt).first()
/scratch/rico/galaxy/lib/galaxy/webapps/base/webapp.py:349: SAWarning: Dialect sqlite+pysqlite does *not* support Decimal objects natively, and SQLAlchemy must convert from floating point - rounding errors and other issues may occur. Please consider storing Decimal numbers as strings or integers on this platform for lossless storage.
  if config.use_remote_user and self.galaxy_session.user.deleted:
uvicorn.access INFO 2024-02-23 14:29:47,290 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51344 - "GET / HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:47,318 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51344 - "GET /static/dist/base.css?v=1707855697000 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:47,321 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51360 - "GET /static/dist/analysis.bundled.js?v=1707855697000 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:47,324 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51352 - "GET /static/dist/libs.bundled.js?v=1707855697000 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:48,282 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51360 - "GET /api/webhooks HTTP/1.1" 200
/scratch/rico/galaxy/lib/galaxy/managers/interactivetool.py:249: SAWarning: Coercing Subquery object into a select() for use in IN(); please pass a select() construct explicitly
  stmt = select(InteractiveToolEntryPoint).where(InteractiveToolEntryPoint.job_id.in_(build_subquery()))
uvicorn.access INFO 2024-02-23 14:29:48,307 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51376 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:48,325 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51344 - "GET /api/configuration HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:48,341 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51352 - "GET /api/users/current HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:48,385 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51344 - "GET /api/webhooks HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:48,392 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51352 - "GET /welcome HTTP/1.1" 302
uvicorn.access INFO 2024-02-23 14:29:48,412 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51376 - "GET /api/tool_panels HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:48,470 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51376 - "GET /static/dist/base.css HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:48,474 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51384 - "GET /favicon.ico HTTP/1.1" 404
uvicorn.access INFO 2024-02-23 14:29:48,511 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51344 - "GET /api/tools?in_panel=False HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:48,538 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51352 - "GET /api/histories/count HTTP/1.1" 200
/scratch/rico/galaxy/lib/galaxy/model/__init__.py:3318: SAWarning: Dialect sqlite+pysqlite does *not* support Decimal objects natively, and SQLAlchemy must convert from floating point - rounding errors and other issues may occur. Please consider storing Decimal numbers as strings or integers on this platform for lossless storage.
  return object_session(self).scalar(stmt) or 0
uvicorn.access INFO 2024-02-23 14:29:48,554 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51360 - "GET /history/current_history_json HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:48,580 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51352 - "GET /history/current_history_json HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:48,613 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51360 - "GET /api/tool_panels/default HTTP/1.1" 200
/scratch/rico/galaxy/lib/galaxy/managers/history_contents.py:232: SAWarning: Dialect sqlite+pysqlite does *not* support Decimal objects natively, and SQLAlchemy must convert from floating point - rounding errors and other issues may occur. Please consider storing Decimal numbers as strings or integers on this platform for lossless storage.
  contents_results = self._union_of_contents_query(container, **kwargs).all()
uvicorn.access INFO 2024-02-23 14:29:48,687 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51352 - "GET /api/histories?view=summary&order=update_time&offset=0&limit=10 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:48,690 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51344 - "GET /api/histories/e94ef2b25ec88be9/contents?v=dev&limit=1000&q=update_time-ge&qv=2024-02-23T19:29:47.782Z HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:48,740 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51376 - "GET /api/datatypes?extension_only=false HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:48,800 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51352 - "GET /static/dist/libs.bundled.js HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:48,871 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51384 - "GET /api/genomes HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:48,872 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51360 - "GET /api/histories/e94ef2b25ec88be9/contents?v=dev&order=hid&offset=0&limit=100&q=deleted&qv=false&q=visible&qv=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:48,898 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51376 - "GET /api/users/e94ef2b25ec88be9 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:48,903 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51344 - "GET /api/histories/count HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:51,792 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51390 - "GET /history/current_history_json?since=2024-02-23T19:29:48.000464 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:54,822 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51392 - "GET /history/current_history_json?since=2024-02-23T19:29:48.000464 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:57,851 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:50962 - "GET /history/current_history_json?since=2024-02-23T19:29:48.000464 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:29:58,400 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:50962 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:01,476 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:50964 - "GET /history/current_history_json?since=2024-02-23T19:29:48.000464 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:04,843 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:50978 - "GET /history/current_history_json?since=2024-02-23T19:29:48.000464 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:07,873 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:36628 - "GET /history/current_history_json?since=2024-02-23T19:29:48.000464 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:08,404 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:36628 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:10,903 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:36636 - "GET /history/current_history_json?since=2024-02-23T19:29:48.000464 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:13,934 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:36652 - "GET /history/current_history_json?since=2024-02-23T19:29:48.000464 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:16,966 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58278 - "GET /history/current_history_json?since=2024-02-23T19:29:48.000464 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:18,407 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58278 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:19,994 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58278 - "GET /history/current_history_json?since=2024-02-23T19:29:48.000464 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:23,026 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58280 - "GET /history/current_history_json?since=2024-02-23T19:29:48.000464 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:26,058 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:35382 - "GET /history/current_history_json?since=2024-02-23T19:29:48.000464 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:28,411 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:35392 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:29,087 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:35392 - "GET /history/current_history_json?since=2024-02-23T19:29:48.000464 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:32,119 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:35406 - "GET /history/current_history_json?since=2024-02-23T19:29:48.000464 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:35,147 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:35418 - "GET /history/current_history_json?since=2024-02-23T19:29:48.000464 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:38,178 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:50712 - "GET /history/current_history_json?since=2024-02-23T19:29:48.000464 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:38,410 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:50712 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:41,207 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:50722 - "GET /history/current_history_json?since=2024-02-23T19:29:48.000464 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:44,239 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:50732 - "GET /history/current_history_json?since=2024-02-23T19:29:48.000464 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:47,270 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46500 - "GET /history/current_history_json?since=2024-02-23T19:29:48.000464 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:48,415 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46500 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:50,299 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46500 - "GET /history/current_history_json?since=2024-02-23T19:29:48.000464 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:53,329 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46514 - "GET /history/current_history_json?since=2024-02-23T19:29:48.000464 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:56,356 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49334 - "GET /history/current_history_json?since=2024-02-23T19:29:48.000464 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:57,485 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49334 - "POST /api/upload/resumable_upload/ HTTP/1.1" 201
uvicorn.access INFO 2024-02-23 14:30:57,537 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49334 - "PATCH /api/upload/resumable_upload/4d30abe413ab43b280d920f7dea4f47e HTTP/1.1" 204
galaxy.tools INFO 2024-02-23 14:30:57,574 [pN:main.1,p:78709,tN:MainThread] Validated and populated state for tool request (1.213 ms)
galaxy.tools.actions.upload DEBUG 2024-02-23 14:30:57,582 [pN:main.1,p:78709,tN:MainThread] Persisted uploads (0.058 ms)
galaxy.tools.actions.upload DEBUG 2024-02-23 14:30:57,655 [pN:main.1,p:78709,tN:MainThread] Created upload job (5.150 ms)
galaxy.tools.execute DEBUG 2024-02-23 14:30:57,655 [pN:main.1,p:78709,tN:MainThread] Tool __DATA_FETCH__ created job None (73.168 ms)
galaxy.web_stack.handlers INFO 2024-02-23 14:30:57,676 [pN:main.1,p:78709,tN:MainThread] (Job[id=1,tool_id=__DATA_FETCH__]) Handler '_default_' assigned using 'HANDLER_ASSIGNMENT_METHODS.DB_SKIP_LOCKED' assignment method
galaxy.tools.execute DEBUG 2024-02-23 14:30:57,680 [pN:main.1,p:78709,tN:MainThread] Created 1 job(s) for tool __DATA_FETCH__ request (106.727 ms)
uvicorn.access INFO 2024-02-23 14:30:57,694 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49334 - "POST /api/tools/fetch HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:58,416 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49334 - "GET /api/entry_points?running=true HTTP/1.1" 200
galaxy.jobs.mapper DEBUG 2024-02-23 14:30:58,477 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] (1) Mapped job to destination id: docker_local
galaxy.jobs.handler DEBUG 2024-02-23 14:30:58,492 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] (1) Dispatching to local runner
galaxy.jobs DEBUG 2024-02-23 14:30:58,503 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] (1) Persisting job destination (destination id: docker_local)
galaxy.jobs DEBUG 2024-02-23 14:30:58,530 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] (1) Working directory for job is: /tmp/tmpqrlh6ih1/job_working_directory/000/1
galaxy.jobs.runners DEBUG 2024-02-23 14:30:58,541 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] Job [1] queued (48.588 ms)
galaxy.jobs.handler INFO 2024-02-23 14:30:58,552 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] (1) Job dispatched
galaxy.jobs DEBUG 2024-02-23 14:30:58,674 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] Job wrapper for Job [1] prepared (102.072 ms)
galaxy.tool_util.deps.containers INFO 2024-02-23 14:30:58,675 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] Checking with container resolver [ExplicitContainerResolver[]] found description [None]
galaxy.tool_util.deps.containers INFO 2024-02-23 14:30:58,675 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] Checking with container resolver [CachedMulledDockerContainerResolver[namespace=biocontainers]] found description [None]
galaxy.tool_util.deps.containers INFO 2024-02-23 14:30:58,675 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] Checking with container resolver [CachedMulledDockerContainerResolver[namespace=local]] found description [None]
galaxy.tool_util.deps.containers INFO 2024-02-23 14:30:58,675 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] Checking with container resolver [MulledDockerContainerResolver[namespace=biocontainers]] found description [None]
galaxy.tool_util.deps.containers INFO 2024-02-23 14:30:58,675 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] Checking with container resolver [BuildDockerContainerResolver[namespace=local]] found description [None]
galaxy.jobs.command_factory INFO 2024-02-23 14:30:58,706 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] Built script [/tmp/tmpqrlh6ih1/job_working_directory/000/1/tool_script.sh] for tool command [python '/scratch/rico/galaxy/lib/galaxy/tools/data_fetch.py' --galaxy-root '/scratch/rico/galaxy' --datatypes-registry '/tmp/tmpqrlh6ih1/job_working_directory/000/1/registry.xml' --request-version '1' --request '/tmp/tmpqrlh6ih1/job_working_directory/000/1/configs/tmpnmy96xuh']
galaxy.jobs.runners DEBUG 2024-02-23 14:30:58,757 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] (1) command is: mkdir -p working outputs configs
if [ -d _working ]; then
    rm -rf working/ outputs/ configs/; cp -R _working working; cp -R _outputs outputs; cp -R _configs configs
else
    cp -R working _working; cp -R outputs _outputs; cp -R configs _configs
fi
cd working; /bin/bash /tmp/tmpqrlh6ih1/job_working_directory/000/1/tool_script.sh > '../outputs/tool_stdout' 2> '../outputs/tool_stderr'; return_code=$?; echo $return_code > /tmp/tmpqrlh6ih1/job_working_directory/000/1/galaxy_1.ec; cd '/tmp/tmpqrlh6ih1/job_working_directory/000/1'; 
[ "$GALAXY_VIRTUAL_ENV" = "None" ] && GALAXY_VIRTUAL_ENV="$_GALAXY_VIRTUAL_ENV"; _galaxy_setup_environment True; python metadata/set.py; sh -c "exit $return_code"
galaxy.jobs.runners.local DEBUG 2024-02-23 14:30:58,781 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] (1) executing job script: /tmp/tmpqrlh6ih1/job_working_directory/000/1/galaxy_1.sh
uvicorn.access INFO 2024-02-23 14:30:59,399 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49334 - "GET /history/current_history_json?since=2024-02-23T19:29:48.000464 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:59,459 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49334 - "GET /api/histories/e94ef2b25ec88be9/contents?v=dev&limit=1000&q=update_time-ge&qv=2024-02-23T19:29:48.589Z HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:59,535 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49334 - "GET /api/users/e94ef2b25ec88be9 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:30:59,564 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49344 - "GET /api/histories/e94ef2b25ec88be9/contents?v=dev&order=hid&offset=0&limit=100&q=deleted&qv=false&q=visible&qv=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:02,523 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49346 - "GET /history/current_history_json?since=2024-02-23T19:30:58.000828 HTTP/1.1" 200
galaxy.jobs.runners.util.process_groups DEBUG 2024-02-23 14:31:05,073 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] check_pg(): No process found in process group 78818
galaxy.jobs.runners.local DEBUG 2024-02-23 14:31:05,073 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] execution finished: /tmp/tmpqrlh6ih1/job_working_directory/000/1/galaxy_1.sh
galaxy.jobs DEBUG 2024-02-23 14:31:05,098 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] finish(): Moved /tmp/tmpqrlh6ih1/job_working_directory/000/1/outputs/dataset_b25039b4-189c-4c5a-9380-009d996fbf23.dat to /tmp/tmpqrlh6ih1/files/b/2/5/dataset_b25039b4-189c-4c5a-9380-009d996fbf23.dat
galaxy.tool_util.provided_metadata DEBUG 2024-02-23 14:31:05,104 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] unnamed outputs [{'__unnamed_outputs': [{'destination': {'type': 'hdas'}, 'elements': [{'name': 'fcsadaptor_prok_test.fa.gz', 'dbkey': '?', 'ext': 'fasta.gz', 'link_data_only': False, 'sources': [], 'hashes': [], 'info': 'uploaded fasta.gz file', 'state': 'ok', 'filename': '/tmp/tmpqrlh6ih1/job_working_directory/000/1/working/gxupload_0', 'object_id': 1}]}]}]
galaxy.jobs DEBUG 2024-02-23 14:31:05,242 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] job_wrapper.finish for job 1 executed (150.364 ms)
uvicorn.access INFO 2024-02-23 14:31:05,558 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49360 - "GET /history/current_history_json?since=2024-02-23T19:30:58.000828 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:05,603 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49360 - "GET /api/histories/e94ef2b25ec88be9/contents?v=dev&limit=1000&q=update_time-ge&qv=2024-02-23T19:30:59.408Z HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:05,655 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49360 - "GET /api/users/e94ef2b25ec88be9 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:05,682 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49370 - "GET /api/histories/e94ef2b25ec88be9/contents?v=dev&order=hid&offset=0&limit=100&q=deleted&qv=false&q=visible&qv=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:08,420 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:54894 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:08,654 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:54894 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:11,688 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:54896 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:14,719 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:54910 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:17,748 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:34476 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:18,420 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:34476 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:20,799 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:34488 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:23,827 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:34494 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:26,858 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33276 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:28,420 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33276 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:29,887 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33276 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:32,919 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33290 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200

==> /tmp/tmpqrlh6ih1/gravity/log/celery-beat.log <==
[2024-02-23 14:31:34,086: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-02-23 14:31:34,099: INFO/MainProcess] Scheduler: Sending due task clean-object-store-caches (galaxy.clean_object_store_caches)
[2024-02-23 14:31:34,141: DEBUG/MainProcess] galaxy.clean_object_store_caches sent. id->0cd32a96-9d0e-4f4d-9772-212740dc8b8c
[2024-02-23 14:31:34,142: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /tmp/tmpqrlh6ih1/gravity/log/celery.log <==
[2024-02-23 14:31:35,137: INFO/MainProcess] Task galaxy.clean_object_store_caches[0cd32a96-9d0e-4f4d-9772-212740dc8b8c] received
[2024-02-23 14:31:35,137: DEBUG/MainProcess] TaskPool: Apply <function fast_trace_task at 0x7f9f1756ed90> (args:('galaxy.clean_object_store_caches', '0cd32a96-9d0e-4f4d-9772-212740dc8b8c', {'lang': 'py', 'task': 'galaxy.clean_object_store_caches', 'id': '0cd32a96-9d0e-4f4d-9772-212740dc8b8c', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '0cd32a96-9d0e-4f4d-9772-212740dc8b8c', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen78504@laila', 'ignore_result': False, 'properties': {'correlation_id': '0cd32a96-9d0e-4f4d-9772-212740dc8b8c', 'reply_to': 'a834fe8d-fc9c-31a2-9791-be846a6fc4af', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '00442f4c-cdc1-41fb-b9c9-cf8c0d8ac151'}, 'reply_to': 'a834fe8d-fc9c-31a2-9791-be846a6fc4af', 'correlation_id': '0cd32a96-9d0e-4f4d-9772-212740dc8b8c', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-02-23 14:31:35,529: DEBUG/MainProcess] python path is: /scratch/rico/.planemo/gx_venv_3/bin, /scratch/rico/galaxy/lib, /usr/lib/python37.zip, /usr/lib/python3.7, /usr/lib/python3.7/lib-dynload, /scratch/rico/.planemo/gx_venv_3/lib/python3.7/site-packages
[2024-02-23 14:31:35,530: DEBUG/MainProcess] Configuration directory is /tmp/tmpqrlh6ih1
[2024-02-23 14:31:35,530: DEBUG/MainProcess] Data directory is /scratch/rico/galaxy/database
[2024-02-23 14:31:35,530: DEBUG/MainProcess] Managed config directory is /tmp/tmpqrlh6ih1
[2024-02-23 14:31:35,559: WARNING/MainProcess] Option master_api_key has been deprecated in favor of bootstrap_admin_api_key
[2024-02-23 14:31:35,560: DEBUG/MainProcess] No extra version JSON file detected at /scratch/rico/galaxy/version.json
[2024-02-23 14:31:35,561: WARNING/MainProcess] No corresponding location name exists for location code: .
[2024-02-23 14:31:35,561: INFO/MainProcess] Using global default values for location name and carbon intensity...
[2024-02-23 14:31:35,563: INFO/MainProcess] Install database targeting Galaxy's database configuration.
[2024-02-23 14:31:35,566: DEBUG/main] WeblessApplicationStack initialized
[2024-02-23 14:31:35,570: DEBUG/main] Loading job configuration from /scratch/rico/galaxytools/tools/ncbi_fcs_adaptor/planemo_job_conf.xml
[2024-02-23 14:31:35,570: DEBUG/main] Read job configuration from file: /scratch/rico/galaxytools/tools/ncbi_fcs_adaptor/planemo_job_conf.xml
[2024-02-23 14:31:35,580: INFO/main] JobConfiguration: No job handler assignment method is set, defaulting to 'HANDLER_ASSIGNMENT_METHODS.DB_SKIP_LOCKED', set the `assign_with` attribute on <handlers> to override the default
[2024-02-23 14:31:35,580: INFO/main] Job handler assignment methods set to: db-skip-locked
[2024-02-23 14:31:35,581: DEBUG/main] default set to child with id or tag 'docker_local'
[2024-02-23 14:31:35,581: DEBUG/main] Done loading job configuration
[2024-02-23 14:31:35,770: WARNING/main] No vault configured. We recommend defining the vault_config_file setting in galaxy.yml

==> /tmp/tmpqrlh6ih1/gravity/log/gunicorn.log <==
uvicorn.access INFO 2024-02-23 14:31:35,947 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59038 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200

==> /tmp/tmpqrlh6ih1/gravity/log/celery.log <==
[2024-02-23 14:31:36,006: DEBUG/main] Loading datatypes from /scratch/rico/galaxy/lib/galaxy/config/sample/datatypes_conf.xml.sample
[2024-02-23 14:31:36,007: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.h.
[2024-02-23 14:31:36,007: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.c.
[2024-02-23 14:31:36,007: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.cpp.
[2024-02-23 14:31:36,007: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.py.
[2024-02-23 14:31:36,007: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.go.
[2024-02-23 14:31:36,007: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.rs.
[2024-02-23 14:31:36,008: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.cs.
[2024-02-23 14:31:36,008: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension hep.root.
[2024-02-23 14:31:36,008: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:JP2 from the datatype registry for extension jp2.
[2024-02-23 14:31:36,008: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Ab1 from the datatype registry for extension ab1.
[2024-02-23 14:31:36,009: DEBUG/main] Retrieved datatype module galaxy.datatypes.assembly:Amos from the datatype registry for extension afg.
[2024-02-23 14:31:36,009: DEBUG/main] Retrieved datatype module galaxy.datatypes.goldenpath:GoldenPath from the datatype registry for extension agp.
[2024-02-23 14:31:36,010: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioComposite from the datatype registry for extension anvio_cog_profile.
[2024-02-23 14:31:36,010: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioComposite from the datatype registry for extension anvio_composite.
[2024-02-23 14:31:36,010: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Data from the datatype registry for extension anvio_classifier.
[2024-02-23 14:31:36,011: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioContigsDB from the datatype registry for extension anvio_contigs_db.
[2024-02-23 14:31:36,011: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioDB from the datatype registry for extension anvio_db.
[2024-02-23 14:31:36,011: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioGenomesDB from the datatype registry for extension anvio_genomes_db.
[2024-02-23 14:31:36,011: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioPanDB from the datatype registry for extension anvio_pan_db.
[2024-02-23 14:31:36,011: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioComposite from the datatype registry for extension anvio_pfam_profile.
[2024-02-23 14:31:36,011: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioProfileDB from the datatype registry for extension anvio_profile_db.
[2024-02-23 14:31:36,011: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioSamplesDB from the datatype registry for extension anvio_samples_db.
[2024-02-23 14:31:36,011: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension anvio_state.
[2024-02-23 14:31:36,011: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioStructureDB from the datatype registry for extension anvio_structure_db.
[2024-02-23 14:31:36,011: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:TSV from the datatype registry for extension anvio_variability.
[2024-02-23 14:31:36,011: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Arff from the datatype registry for extension arff.
[2024-02-23 14:31:36,012: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Paf from the datatype registry for extension paf.
[2024-02-23 14:31:36,012: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Gfa1 from the datatype registry for extension gfa1.
[2024-02-23 14:31:36,012: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Gfa2 from the datatype registry for extension gfa2.
[2024-02-23 14:31:36,012: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:GenericAsn1 from the datatype registry for extension asn1.
[2024-02-23 14:31:36,012: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:GenericAsn1Binary from the datatype registry for extension asn1-binary.
[2024-02-23 14:31:36,012: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Axt from the datatype registry for extension axt.
[2024-02-23 14:31:36,012: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:FeatureLocationIndex from the datatype registry for extension fli.
[2024-02-23 14:31:36,012: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Bam from the datatype registry for extension bam.
[2024-02-23 14:31:36,012: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension bai.
[2024-02-23 14:31:36,012: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BamInputSorted from the datatype registry for extension qname_input_sorted.bam.
[2024-02-23 14:31:36,013: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BamQuerynameSorted from the datatype registry for extension qname_sorted.bam.
[2024-02-23 14:31:36,013: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BamNative from the datatype registry for extension unsorted.bam.
[2024-02-23 14:31:36,013: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:ProBam from the datatype registry for extension probam.
[2024-02-23 14:31:36,013: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CRAM from the datatype registry for extension cram.
[2024-02-23 14:31:36,013: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Bed from the datatype registry for extension bed.
[2024-02-23 14:31:36,013: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:BedGraph from the datatype registry for extension bedgraph.
[2024-02-23 14:31:36,013: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:BedStrict from the datatype registry for extension bedstrict.
[2024-02-23 14:31:36,013: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Bed6 from the datatype registry for extension bed6.
[2024-02-23 14:31:36,013: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Bed12 from the datatype registry for extension bed12.
[2024-02-23 14:31:36,014: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:ProBed from the datatype registry for extension probed.
[2024-02-23 14:31:36,014: DEBUG/main] Retrieved datatype module galaxy.datatypes.chrominfo:ChromInfo from the datatype registry for extension len.
[2024-02-23 14:31:36,014: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:DAA from the datatype registry for extension daa.
[2024-02-23 14:31:36,014: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RMA6 from the datatype registry for extension rma6.
[2024-02-23 14:31:36,014: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:DMND from the datatype registry for extension dmnd.
[2024-02-23 14:31:36,014: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Parquet from the datatype registry for extension parquet.
[2024-02-23 14:31:36,014: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Idat from the datatype registry for extension idat.
[2024-02-23 14:31:36,014: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BigBed from the datatype registry for extension bigbed.
[2024-02-23 14:31:36,014: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BigWig from the datatype registry for extension bigwig.
[2024-02-23 14:31:36,015: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension cxb.
[2024-02-23 14:31:36,015: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:ChromatinInteractions from the datatype registry for extension chrint.
[2024-02-23 14:31:36,015: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:CSV from the datatype registry for extension csv.
[2024-02-23 14:31:36,015: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:TSV from the datatype registry for extension tsv.
[2024-02-23 14:31:36,015: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:TSV from the datatype registry for extension intermine_tabular.
[2024-02-23 14:31:36,015: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:CustomTrack from the datatype registry for extension customtrack.
[2024-02-23 14:31:36,016: DEBUG/main] Retrieved datatype module galaxy.datatypes.ngsindex:BowtieColorIndex from the datatype registry for extension bowtie_color_index.
[2024-02-23 14:31:36,016: DEBUG/main] Retrieved datatype module galaxy.datatypes.ngsindex:BowtieBaseIndex from the datatype registry for extension bowtie_base_index.
[2024-02-23 14:31:36,016: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:csFasta from the datatype registry for extension csfasta.
[2024-02-23 14:31:36,016: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Data from the datatype registry for extension data.
[2024-02-23 14:31:36,016: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension gz.
[2024-02-23 14:31:36,016: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension binary.
[2024-02-23 14:31:36,016: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension d3_hierarchy.
[2024-02-23 14:31:36,016: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:ImgtJson from the datatype registry for extension imgt.json.
[2024-02-23 14:31:36,016: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:GeoJson from the datatype registry for extension geojson.
[2024-02-23 14:31:36,016: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension data_manager_json.
[2024-02-23 14:31:36,016: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:DotBracket from the datatype registry for extension dbn.
[2024-02-23 14:31:36,017: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension fai.
[2024-02-23 14:31:36,017: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Fasta from the datatype registry for extension fasta.
[2024-02-23 14:31:36,017: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Fastg from the datatype registry for extension fastg.
[2024-02-23 14:31:36,017: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Fastq from the datatype registry for extension fastq.
[2024-02-23 14:31:36,017: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:FastqSanger from the datatype registry for extension fastqsanger.
[2024-02-23 14:31:36,017: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:FastqSolexa from the datatype registry for extension fastqsolexa.
[2024-02-23 14:31:36,018: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:FastqCSSanger from the datatype registry for extension fastqcssanger.
[2024-02-23 14:31:36,018: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:FastqIllumina from the datatype registry for extension fastqillumina.
[2024-02-23 14:31:36,018: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:SequenceSplitLocations from the datatype registry for extension fqtoc.
[2024-02-23 14:31:36,018: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Eland from the datatype registry for extension eland.
[2024-02-23 14:31:36,018: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:ElandMulti from the datatype registry for extension elandmulti.
[2024-02-23 14:31:36,018: DEBUG/main] Retrieved datatype module galaxy.datatypes.tracks:GeneTrack from the datatype registry for extension genetrack.
[2024-02-23 14:31:36,019: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Gff from the datatype registry for extension gff.
[2024-02-23 14:31:36,019: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Gff3 from the datatype registry for extension gff3.
[2024-02-23 14:31:36,019: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Gif from the datatype registry for extension gif.
[2024-02-23 14:31:36,019: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Gmaj from the datatype registry for extension gmaj.zip.
[2024-02-23 14:31:36,019: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension graph_dot.
[2024-02-23 14:31:36,019: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Gtf from the datatype registry for extension gtf.
[2024-02-23 14:31:36,019: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension toolshed.gz.
[2024-02-23 14:31:36,019: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension hdf4.
[2024-02-23 14:31:36,020: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:H5 from the datatype registry for extension h5.
[2024-02-23 14:31:36,020: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:H5 from the datatype registry for extension scool.
[2024-02-23 14:31:36,020: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Grib from the datatype registry for extension grib.
[2024-02-23 14:31:36,020: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Loom from the datatype registry for extension loom.
[2024-02-23 14:31:36,020: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Anndata from the datatype registry for extension h5ad.
[2024-02-23 14:31:36,020: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Visium from the datatype registry for extension visium.tar.gz.
[2024-02-23 14:31:36,020: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:H5 from the datatype registry for extension mz5.
[2024-02-23 14:31:36,020: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension hyphy_results.json.
[2024-02-23 14:31:36,020: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension hivtrace.
[2024-02-23 14:31:36,020: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Cool from the datatype registry for extension cool.
[2024-02-23 14:31:36,020: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:MCool from the datatype registry for extension mcool.
[2024-02-23 14:31:36,021: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:H5MLM from the datatype registry for extension h5mlm.
[2024-02-23 14:31:36,021: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:LudwigModel from the datatype registry for extension ludwig_model.
[2024-02-23 14:31:36,021: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Html from the datatype registry for extension html.
[2024-02-23 14:31:36,021: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Html from the datatype registry for extension ludwig_report.html.
[2024-02-23 14:31:36,021: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Interval from the datatype registry for extension interval.
[2024-02-23 14:31:36,021: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension jellyfish.
[2024-02-23 14:31:36,021: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension ktab.
[2024-02-23 14:31:36,021: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension hist.
[2024-02-23 14:31:36,021: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension prof.
[2024-02-23 14:31:36,104: DEBUG/main] Retrieved datatype module galaxy.datatypes.isa:IsaTab from the datatype registry for extension isa-tab.
[2024-02-23 14:31:36,105: DEBUG/main] Retrieved datatype module galaxy.datatypes.isa:IsaJson from the datatype registry for extension isa-json.
[2024-02-23 14:31:36,105: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension picard_interval_list.
[2024-02-23 14:31:36,105: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension gatk_interval.
[2024-02-23 14:31:36,105: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension gatk_report.
[2024-02-23 14:31:36,105: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension gatk_dbsnp.
[2024-02-23 14:31:36,106: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension gatk_tranche.
[2024-02-23 14:31:36,106: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension gatk_recal.
[2024-02-23 14:31:36,106: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension cnn.
[2024-02-23 14:31:36,106: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension cns.
[2024-02-23 14:31:36,106: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension cnr.
[2024-02-23 14:31:36,106: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension hhr.
[2024-02-23 14:31:36,106: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Jpg from the datatype registry for extension jpg.
[2024-02-23 14:31:36,106: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension tiff.
[2024-02-23 14:31:36,106: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension tf2.
[2024-02-23 14:31:36,107: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension tf8.
[2024-02-23 14:31:36,107: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension btf.
[2024-02-23 14:31:36,107: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension tif.
[2024-02-23 14:31:36,107: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension svs.
[2024-02-23 14:31:36,107: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension scn.
[2024-02-23 14:31:36,107: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension bif.
[2024-02-23 14:31:36,107: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:OMETiff from the datatype registry for extension ome.tiff.
[2024-02-23 14:31:36,107: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Hamamatsu from the datatype registry for extension vms.
[2024-02-23 14:31:36,107: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Hamamatsu from the datatype registry for extension vmu.
[2024-02-23 14:31:36,107: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Hamamatsu from the datatype registry for extension ndpi.
[2024-02-23 14:31:36,107: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Mirax from the datatype registry for extension mrxs.
[2024-02-23 14:31:36,108: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Sakura from the datatype registry for extension svslide.
[2024-02-23 14:31:36,108: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Bmp from the datatype registry for extension bmp.
[2024-02-23 14:31:36,108: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Im from the datatype registry for extension im.
[2024-02-23 14:31:36,108: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Pcd from the datatype registry for extension pcd.
[2024-02-23 14:31:36,108: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Pcx from the datatype registry for extension pcx.
[2024-02-23 14:31:36,108: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Ppm from the datatype registry for extension ppm.
[2024-02-23 14:31:36,108: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Psd from the datatype registry for extension psd.
[2024-02-23 14:31:36,108: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Xbm from the datatype registry for extension xbm.
[2024-02-23 14:31:36,108: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Xpm from the datatype registry for extension xpm.
[2024-02-23 14:31:36,108: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Rgb from the datatype registry for extension rgb.
[2024-02-23 14:31:36,108: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Pbm from the datatype registry for extension pbm.
[2024-02-23 14:31:36,108: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Pgm from the datatype registry for extension pgm.
[2024-02-23 14:31:36,108: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Nrrd from the datatype registry for extension nrrd.
[2024-02-23 14:31:36,108: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Nrrd from the datatype registry for extension nhdr.
[2024-02-23 14:31:36,109: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:RNADotPlotMatrix from the datatype registry for extension rna_eps.
[2024-02-23 14:31:36,110: DEBUG/main] Retrieved datatype module galaxy.datatypes.qiime2:QIIME2Artifact from the datatype registry for extension qza.
[2024-02-23 14:31:36,110: DEBUG/main] Retrieved datatype module galaxy.datatypes.qiime2:QIIME2Visualization from the datatype registry for extension qzv.
[2024-02-23 14:31:36,110: DEBUG/main] Retrieved datatype module galaxy.datatypes.qiime2:QIIME2Metadata from the datatype registry for extension qiime2.tabular.
[2024-02-23 14:31:36,110: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CompressedZipArchive from the datatype registry for extension zip.
[2024-02-23 14:31:36,110: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CompressedZipArchive from the datatype registry for extension ncbi_genome_dataset.zip.
[2024-02-23 14:31:36,110: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension tar.
[2024-02-23 14:31:36,110: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Directory from the datatype registry for extension directory.
[2024-02-23 14:31:36,110: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Yaml from the datatype registry for extension yaml.
[2024-02-23 14:31:36,110: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension mrm.
[2024-02-23 14:31:36,113: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Dta from the datatype registry for extension dta.
[2024-02-23 14:31:36,113: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Dta2d from the datatype registry for extension dta2d.
[2024-02-23 14:31:36,113: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Edta from the datatype registry for extension edta.
[2024-02-23 14:31:36,113: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PepXml from the datatype registry for extension pepxml.
[2024-02-23 14:31:36,113: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PepXml from the datatype registry for extension raw_pepxml.
[2024-02-23 14:31:36,113: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PepXml from the datatype registry for extension peptideprophet_pepxml.
[2024-02-23 14:31:36,113: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PepXml from the datatype registry for extension interprophet_pepxml.
[2024-02-23 14:31:36,113: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:ProtXML from the datatype registry for extension protxml.
[2024-02-23 14:31:36,113: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:ParamXml from the datatype registry for extension paramxml.
[2024-02-23 14:31:36,114: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Kroenik from the datatype registry for extension kroenik.
[2024-02-23 14:31:36,114: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PepList from the datatype registry for extension peplist.
[2024-02-23 14:31:36,114: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PSMS from the datatype registry for extension psms.
[2024-02-23 14:31:36,114: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PepXmlReport from the datatype registry for extension pepxml.tsv.
[2024-02-23 14:31:36,114: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:ProtXmlReport from the datatype registry for extension protxml.tsv.
[2024-02-23 14:31:36,114: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MascotDat from the datatype registry for extension mascotdat.
[2024-02-23 14:31:36,114: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MzIdentML from the datatype registry for extension mzid.
[2024-02-23 14:31:36,114: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:IdXML from the datatype registry for extension idxml.
[2024-02-23 14:31:36,114: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:TandemXML from the datatype registry for extension tandem.
[2024-02-23 14:31:36,114: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension sirius.ms.
[2024-02-23 14:31:36,114: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:ThermoRAW from the datatype registry for extension thermo.raw.
[2024-02-23 14:31:36,114: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BafTar from the datatype registry for extension brukerbaf.d.tar.
[2024-02-23 14:31:36,114: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:YepTar from the datatype registry for extension agilentbrukeryep.d.tar.
[2024-02-23 14:31:36,115: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:TdfTar from the datatype registry for extension brukertdf.d.tar.
[2024-02-23 14:31:36,115: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:MassHunterTar from the datatype registry for extension agilentmasshunter.d.tar.
[2024-02-23 14:31:36,115: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:MassLynxTar from the datatype registry for extension watersmasslynx.raw.tar.
[2024-02-23 14:31:36,115: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:WiffTar from the datatype registry for extension wiff.tar.
[2024-02-23 14:31:36,115: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Wiff2Tar from the datatype registry for extension wiff2.tar.
[2024-02-23 14:31:36,115: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MascotXML from the datatype registry for extension mascotxml.
[2024-02-23 14:31:36,115: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MzTab from the datatype registry for extension mztab.
[2024-02-23 14:31:36,115: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MzTab2 from the datatype registry for extension mztab2.
[2024-02-23 14:31:36,115: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MzML from the datatype registry for extension mzml.
[2024-02-23 14:31:36,115: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:NmrML from the datatype registry for extension nmrml.
[2024-02-23 14:31:36,115: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Meryldb from the datatype registry for extension meryldb.
[2024-02-23 14:31:36,116: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Bref3 from the datatype registry for extension bref3.
[2024-02-23 14:31:36,116: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Mgf from the datatype registry for extension mgf.
[2024-02-23 14:31:36,116: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Wiff from the datatype registry for extension wiff.
[2024-02-23 14:31:36,116: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Wiff2 from the datatype registry for extension wiff2.
[2024-02-23 14:31:36,116: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MzXML from the datatype registry for extension mzxml.
[2024-02-23 14:31:36,116: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MzData from the datatype registry for extension mzdata.
[2024-02-23 14:31:36,116: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Ms2 from the datatype registry for extension ms2.
[2024-02-23 14:31:36,116: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MzQuantML from the datatype registry for extension mzq.
[2024-02-23 14:31:36,116: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:SQlite from the datatype registry for extension sqlite.
[2024-02-23 14:31:36,116: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:MzSQlite from the datatype registry for extension mz.sqlite.
[2024-02-23 14:31:36,116: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:OSW from the datatype registry for extension osw.
[2024-02-23 14:31:36,116: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:PQP from the datatype registry for extension pqp.
[2024-02-23 14:31:36,116: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:TraML from the datatype registry for extension traml.
[2024-02-23 14:31:36,117: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:TrafoXML from the datatype registry for extension trafoxml.
[2024-02-23 14:31:36,117: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:FeatureXML from the datatype registry for extension featurexml.
[2024-02-23 14:31:36,117: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:ConsensusXML from the datatype registry for extension consensusxml.
[2024-02-23 14:31:36,117: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:UniProtXML from the datatype registry for extension uniprotxml.
[2024-02-23 14:31:36,117: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:XquestXML from the datatype registry for extension xquest.xml.
[2024-02-23 14:31:36,117: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:XquestSpecXML from the datatype registry for extension spec.xml.
[2024-02-23 14:31:36,117: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:QCML from the datatype registry for extension qcml.
[2024-02-23 14:31:36,117: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension mzqc.
[2024-02-23 14:31:36,117: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Msp from the datatype registry for extension msp.
[2024-02-23 14:31:36,117: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:SPLibNoIndex from the datatype registry for extension splib_noindex.
[2024-02-23 14:31:36,117: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:SPLib from the datatype registry for extension splib.
[2024-02-23 14:31:36,117: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BlibSQlite from the datatype registry for extension blib.
[2024-02-23 14:31:36,117: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:DlibSQlite from the datatype registry for extension dlib.
[2024-02-23 14:31:36,118: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:ElibSQlite from the datatype registry for extension elib.
[2024-02-23 14:31:36,118: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:XHunterAslFormat from the datatype registry for extension hlf.
[2024-02-23 14:31:36,118: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:IdpDB from the datatype registry for extension idpdb.
[2024-02-23 14:31:36,118: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Sf3 from the datatype registry for extension sf3.
[2024-02-23 14:31:36,118: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension cps.
[2024-02-23 14:31:36,118: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:ConnectivityTable from the datatype registry for extension ct.
[2024-02-23 14:31:36,118: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:PostgresqlArchive from the datatype registry for extension postgresql.
[2024-02-23 14:31:36,118: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:MongoDBArchive from the datatype registry for extension mongodb.
[2024-02-23 14:31:36,118: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:GeneNoteBook from the datatype registry for extension genenotebook.
[2024-02-23 14:31:36,118: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:SearchGuiArchive from the datatype registry for extension searchgui_archive.
[2024-02-23 14:31:36,118: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Fast5Archive from the datatype registry for extension fast5.tar.
[2024-02-23 14:31:36,118: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Fast5ArchiveGz from the datatype registry for extension fast5.tar.gz.
[2024-02-23 14:31:36,118: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Fast5ArchiveBz2 from the datatype registry for extension fast5.tar.bz2.
[2024-02-23 14:31:36,119: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension peptideshaker_archive.
[2024-02-23 14:31:36,119: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension percin.
[2024-02-23 14:31:36,119: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:GenericXml from the datatype registry for extension percout.
[2024-02-23 14:31:36,119: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension hardklor.
[2024-02-23 14:31:36,119: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension kronik.
[2024-02-23 14:31:36,119: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:ImzML from the datatype registry for extension imzml.
[2024-02-23 14:31:36,119: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Analyze75 from the datatype registry for extension analyze75.
[2024-02-23 14:31:36,119: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Nifti1 from the datatype registry for extension nii1.
[2024-02-23 14:31:36,120: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Nifti2 from the datatype registry for extension nii2.
[2024-02-23 14:31:36,120: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Gifti from the datatype registry for extension gii.
[2024-02-23 14:31:36,120: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tck from the datatype registry for extension tck.
[2024-02-23 14:31:36,120: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Trk from the datatype registry for extension trk.
[2024-02-23 14:31:36,120: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Mrc2014 from the datatype registry for extension mrc.
[2024-02-23 14:31:36,120: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Star from the datatype registry for extension star.
[2024-02-23 14:31:36,120: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PEFF from the datatype registry for extension peff.
[2024-02-23 14:31:36,120: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension toml.
[2024-02-23 14:31:36,121: DEBUG/main] Retrieved datatype module galaxy.datatypes.flow:FCS from the datatype registry for extension fcs.
[2024-02-23 14:31:36,121: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowtext.
[2024-02-23 14:31:36,121: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowclr.
[2024-02-23 14:31:36,122: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowmfi.
[2024-02-23 14:31:36,122: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowstat1.
[2024-02-23 14:31:36,122: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowstat2.
[2024-02-23 14:31:36,123: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowstat3.
[2024-02-23 14:31:36,123: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowscore.
[2024-02-23 14:31:36,123: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension flowframe.
[2024-02-23 14:31:36,123: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension fsom.
[2024-02-23 14:31:36,123: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension flowset.
[2024-02-23 14:31:36,123: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension metacyto_clr.txt.
[2024-02-23 14:31:36,124: DEBUG/main] Retrieved datatype module galaxy.datatypes.metacyto:mSummary from the datatype registry for extension metacyto_summary.txt.
[2024-02-23 14:31:36,124: DEBUG/main] Retrieved datatype module galaxy.datatypes.metacyto:mStats from the datatype registry for extension metacyto_stats.txt.
[2024-02-23 14:31:36,124: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension deeptools_compute_matrix_archive.
[2024-02-23 14:31:36,124: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension deeptools_coverage_matrix.
[2024-02-23 14:31:36,124: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:NetCDF from the datatype registry for extension netcdf.
[2024-02-23 14:31:36,124: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Eps from the datatype registry for extension eps.
[2024-02-23 14:31:36,124: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Rast from the datatype registry for extension rast.
[2024-02-23 14:31:36,124: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Laj from the datatype registry for extension laj.
[2024-02-23 14:31:36,124: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Lav from the datatype registry for extension lav.
[2024-02-23 14:31:36,124: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Maf from the datatype registry for extension maf.
[2024-02-23 14:31:36,125: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:MafCustomTrack from the datatype registry for extension mafcustomtrack.
[2024-02-23 14:31:36,125: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:MatrixMarket from the datatype registry for extension mtx.
[2024-02-23 14:31:36,125: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:CMAP from the datatype registry for extension cmap.
[2024-02-23 14:31:36,125: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:ENCODEPeak from the datatype registry for extension encodepeak.
[2024-02-23 14:31:36,125: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Pdf from the datatype registry for extension pdf.
[2024-02-23 14:31:36,125: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Pileup from the datatype registry for extension pileup.
[2024-02-23 14:31:36,125: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Psl from the datatype registry for extension psl.
[2024-02-23 14:31:36,125: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Obo from the datatype registry for extension obo.
[2024-02-23 14:31:36,125: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:Owl from the datatype registry for extension owl.
[2024-02-23 14:31:36,125: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Png from the datatype registry for extension png.
[2024-02-23 14:31:36,125: DEBUG/main] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScore from the datatype registry for extension qual.
[2024-02-23 14:31:36,125: DEBUG/main] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScoreSolexa from the datatype registry for extension qualsolexa.
[2024-02-23 14:31:36,126: DEBUG/main] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScoreIllumina from the datatype registry for extension qualillumina.
[2024-02-23 14:31:36,126: DEBUG/main] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScoreSOLiD from the datatype registry for extension qualsolid.
[2024-02-23 14:31:36,126: DEBUG/main] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScore454 from the datatype registry for extension qual454.
[2024-02-23 14:31:36,126: DEBUG/main] Retrieved datatype module galaxy.datatypes.assembly:Roadmaps from the datatype registry for extension roadmaps.
[2024-02-23 14:31:36,126: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Sam from the datatype registry for extension sam.
[2024-02-23 14:31:36,126: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Scf from the datatype registry for extension scf.
[2024-02-23 14:31:36,126: DEBUG/main] Retrieved datatype module galaxy.datatypes.assembly:Sequences from the datatype registry for extension sequences.
[2024-02-23 14:31:36,126: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:SnpEffDb from the datatype registry for extension snpeffdb.
[2024-02-23 14:31:36,126: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:SnpSiftDbNSFP from the datatype registry for extension snpsiftdbnsfp.
[2024-02-23 14:31:36,126: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension dbnsfp.tabular.
[2024-02-23 14:31:36,126: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Sff from the datatype registry for extension sff.
[2024-02-23 14:31:36,127: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Sra from the datatype registry for extension sra.
[2024-02-23 14:31:36,127: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:SraManifest from the datatype registry for extension sra_manifest.tabular.
[2024-02-23 14:31:36,127: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:GenericXml from the datatype registry for extension svg.
[2024-02-23 14:31:36,127: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Taxonomy from the datatype registry for extension taxonomy.
[2024-02-23 14:31:36,127: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension tabular.
[2024-02-23 14:31:36,127: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:TwoBit from the datatype registry for extension twobit.
[2024-02-23 14:31:36,127: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:SQmass from the datatype registry for extension sqmass.
[2024-02-23 14:31:36,127: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:GeminiSQLite from the datatype registry for extension gemini.sqlite.
[2024-02-23 14:31:36,127: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:ChiraSQLite from the datatype registry for extension chira.sqlite.
[2024-02-23 14:31:36,127: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CuffDiffSQlite from the datatype registry for extension cuffdiff.sqlite.
[2024-02-23 14:31:36,128: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:GAFASQLite from the datatype registry for extension gafa.sqlite.
[2024-02-23 14:31:36,128: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:NcbiTaxonomySQlite from the datatype registry for extension ncbitaxonomy.sqlite.
[2024-02-23 14:31:36,128: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension txt.
[2024-02-23 14:31:36,128: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:LineCount from the datatype registry for extension linecount.
[2024-02-23 14:31:36,128: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:MemePsp from the datatype registry for extension memepsp.
[2024-02-23 14:31:36,128: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:MEMEXml from the datatype registry for extension memexml.
[2024-02-23 14:31:36,128: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:CisML from the datatype registry for extension cisml.
[2024-02-23 14:31:36,128: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:GenericXml from the datatype registry for extension xml.
[2024-02-23 14:31:36,128: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:GenericXml from the datatype registry for extension xsd.
[2024-02-23 14:31:36,128: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:Dzi from the datatype registry for extension dzi.
[2024-02-23 14:31:36,128: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Vcf from the datatype registry for extension vcf.
[2024-02-23 14:31:36,128: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Bcf from the datatype registry for extension bcf.
[2024-02-23 14:31:36,129: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Bcf from the datatype registry for extension bcf_bgzip.
[2024-02-23 14:31:36,129: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BcfUncompressed from the datatype registry for extension bcf_uncompressed.
[2024-02-23 14:31:36,129: DEBUG/main] Retrieved datatype module galaxy.datatypes.assembly:Velvet from the datatype registry for extension velvet.
[2024-02-23 14:31:36,129: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Wiggle from the datatype registry for extension wig.
[2024-02-23 14:31:36,129: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension interval_index.
[2024-02-23 14:31:36,129: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension odgi.
[2024-02-23 14:31:36,129: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension vg.
[2024-02-23 14:31:36,129: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension xg.
[2024-02-23 14:31:36,129: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension protobuf2.
[2024-02-23 14:31:36,130: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension protobuf3.
[2024-02-23 14:31:36,130: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension onnx.
[2024-02-23 14:31:36,130: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension tabix.
[2024-02-23 14:31:36,130: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:IntervalTabix from the datatype registry for extension interval_tabix.gz.
[2024-02-23 14:31:36,130: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:JuicerMediumTabix from the datatype registry for extension juicer_medium_tabix.gz.
[2024-02-23 14:31:36,130: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:BedTabix from the datatype registry for extension bed_tabix.gz.
[2024-02-23 14:31:36,130: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:GffTabix from the datatype registry for extension gff_tabix.gz.
[2024-02-23 14:31:36,130: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension bgzip.
[2024-02-23 14:31:36,130: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:VcfGz from the datatype registry for extension vcf_bgzip.
[2024-02-23 14:31:36,130: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension bus.
[2024-02-23 14:31:36,131: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension kallisto.idx.
[2024-02-23 14:31:36,131: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:Phyloxml from the datatype registry for extension phyloxml.
[2024-02-23 14:31:36,131: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Newick from the datatype registry for extension newick.
[2024-02-23 14:31:36,131: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Newick from the datatype registry for extension nhx.
[2024-02-23 14:31:36,131: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Nexus from the datatype registry for extension nex.
[2024-02-23 14:31:36,131: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:IQTree from the datatype registry for extension iqtree.
[2024-02-23 14:31:36,133: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:SquareDistanceMatrix from the datatype registry for extension mldist.
[2024-02-23 14:31:36,135: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Affybatch from the datatype registry for extension affybatch.
[2024-02-23 14:31:36,135: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Eigenstratgeno from the datatype registry for extension eigenstratgeno.
[2024-02-23 14:31:36,136: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Eigenstratpca from the datatype registry for extension eigenstratpca.
[2024-02-23 14:31:36,136: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Eset from the datatype registry for extension eset.
[2024-02-23 14:31:36,136: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Fped from the datatype registry for extension fped.
[2024-02-23 14:31:36,136: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Fphe from the datatype registry for extension fphe.
[2024-02-23 14:31:36,136: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:GenomeGraphs from the datatype registry for extension gg.
[2024-02-23 14:31:36,136: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:ldIndep from the datatype registry for extension ldindep.
[2024-02-23 14:31:36,136: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:MAlist from the datatype registry for extension malist.
[2024-02-23 14:31:36,136: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Lped from the datatype registry for extension lped.
[2024-02-23 14:31:36,136: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Pbed from the datatype registry for extension pbed.
[2024-02-23 14:31:36,136: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Pheno from the datatype registry for extension pheno.
[2024-02-23 14:31:36,136: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Pphe from the datatype registry for extension pphe.
[2024-02-23 14:31:36,137: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:RexpBase from the datatype registry for extension rexpbase.
[2024-02-23 14:31:36,137: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Rgenetics from the datatype registry for extension rgenetics.
[2024-02-23 14:31:36,137: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Snptest from the datatype registry for extension snptest.
[2024-02-23 14:31:36,137: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:SNPMatrix from the datatype registry for extension snpmatrix.
[2024-02-23 14:31:36,137: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:ExcelXls from the datatype registry for extension xls.
[2024-02-23 14:31:36,137: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Ipynb from the datatype registry for extension ipynb.
[2024-02-23 14:31:36,137: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension json.
[2024-02-23 14:31:36,137: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:ExpressionJson from the datatype registry for extension expression.json.
[2024-02-23 14:31:36,138: DEBUG/main] Retrieved datatype module galaxy.datatypes.graph:Xgmml from the datatype registry for extension xgmml.
[2024-02-23 14:31:36,138: DEBUG/main] Retrieved datatype module galaxy.datatypes.graph:Sif from the datatype registry for extension sif.
[2024-02-23 14:31:36,139: DEBUG/main] Retrieved datatype module galaxy.datatypes.triples:Triples from the datatype registry for extension triples.
[2024-02-23 14:31:36,139: DEBUG/main] Retrieved datatype module galaxy.datatypes.triples:HDT from the datatype registry for extension hdt.
[2024-02-23 14:31:36,140: DEBUG/main] Retrieved datatype module galaxy.datatypes.triples:NTriples from the datatype registry for extension nt.
[2024-02-23 14:31:36,140: DEBUG/main] Retrieved datatype module galaxy.datatypes.triples:N3 from the datatype registry for extension n3.
[2024-02-23 14:31:36,140: DEBUG/main] Retrieved datatype module galaxy.datatypes.triples:Turtle from the datatype registry for extension ttl.
[2024-02-23 14:31:36,140: DEBUG/main] Retrieved datatype module galaxy.datatypes.triples:Rdf from the datatype registry for extension rdf.
[2024-02-23 14:31:36,140: DEBUG/main] Retrieved datatype module galaxy.datatypes.triples:Jsonld from the datatype registry for extension jsonld.
[2024-02-23 14:31:36,140: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:ExcelXls from the datatype registry for extension excel.xls.
[2024-02-23 14:31:36,140: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Xlsx from the datatype registry for extension xlsx.
[2024-02-23 14:31:36,140: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension docx.
[2024-02-23 14:31:36,140: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension btwisted.
[2024-02-23 14:31:36,140: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cai.
[2024-02-23 14:31:36,140: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cat_db.
[2024-02-23 14:31:36,140: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension charge.
[2024-02-23 14:31:36,141: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension checktrans.
[2024-02-23 14:31:36,141: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension chips.
[2024-02-23 14:31:36,141: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension codcmp.
[2024-02-23 14:31:36,141: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension coderet.
[2024-02-23 14:31:36,141: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension compseq.
[2024-02-23 14:31:36,141: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cpgplot.
[2024-02-23 14:31:36,141: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cpgreport.
[2024-02-23 14:31:36,141: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cusp.
[2024-02-23 14:31:36,141: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cut.
[2024-02-23 14:31:36,141: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension dan.
[2024-02-23 14:31:36,141: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension digest.
[2024-02-23 14:31:36,142: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension dreg.
[2024-02-23 14:31:36,142: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension einverted.
[2024-02-23 14:31:36,142: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension epestfind.
[2024-02-23 14:31:36,142: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension equicktandem.
[2024-02-23 14:31:36,142: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension est2genome.
[2024-02-23 14:31:36,142: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension etandem.
[2024-02-23 14:31:36,142: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension freak.
[2024-02-23 14:31:36,142: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension fuzznuc.
[2024-02-23 14:31:36,142: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension fuzzpro.
[2024-02-23 14:31:36,142: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension fuzztran.
[2024-02-23 14:31:36,142: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension garnier.
[2024-02-23 14:31:36,143: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension geecee.
[2024-02-23 14:31:36,143: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension helixturnhelix.
[2024-02-23 14:31:36,143: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension hmoment.
[2024-02-23 14:31:36,143: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension isochore.
[2024-02-23 14:31:36,143: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension match.
[2024-02-23 14:31:36,143: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension nametable.
[2024-02-23 14:31:36,143: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension needle.
[2024-02-23 14:31:36,143: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension newcpgreport.
[2024-02-23 14:31:36,143: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension newcpgseek.
[2024-02-23 14:31:36,143: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension noreturn.
[2024-02-23 14:31:36,144: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension palindrome.
[2024-02-23 14:31:36,144: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pepcoil.
[2024-02-23 14:31:36,144: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pepinfo.
[2024-02-23 14:31:36,144: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pepstats.
[2024-02-23 14:31:36,144: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension polydot.
[2024-02-23 14:31:36,144: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension preg.
[2024-02-23 14:31:36,144: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension prettyseq.
[2024-02-23 14:31:36,144: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension primersearch.
[2024-02-23 14:31:36,144: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension showfeat.
[2024-02-23 14:31:36,144: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension showorf.
[2024-02-23 14:31:36,144: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension sixpack.
[2024-02-23 14:31:36,145: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension strider.
[2024-02-23 14:31:36,145: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension supermatcher.
[2024-02-23 14:31:36,145: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension syco.
[2024-02-23 14:31:36,145: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension textsearch.
[2024-02-23 14:31:36,145: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension vectorstrip.
[2024-02-23 14:31:36,145: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension wobble.
[2024-02-23 14:31:36,145: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension wordcount.
[2024-02-23 14:31:36,145: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension dbmotif.
[2024-02-23 14:31:36,145: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension diffseq.
[2024-02-23 14:31:36,145: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension excel.
[2024-02-23 14:31:36,145: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension feattable.
[2024-02-23 14:31:36,146: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension motif.
[2024-02-23 14:31:36,146: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension regions.
[2024-02-23 14:31:36,146: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension seqtable.
[2024-02-23 14:31:36,146: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension simple.
[2024-02-23 14:31:36,146: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension table.
[2024-02-23 14:31:36,146: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension tagseq.
[2024-02-23 14:31:36,146: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension acedb.
[2024-02-23 14:31:36,146: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension clustal.
[2024-02-23 14:31:36,146: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension codata.
[2024-02-23 14:31:36,146: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension embl.
[2024-02-23 14:31:36,146: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension fitch.
[2024-02-23 14:31:36,147: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension gcg.
[2024-02-23 14:31:36,147: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Genbank from the datatype registry for extension genbank.
[2024-02-23 14:31:36,147: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension hennig86.
[2024-02-23 14:31:36,147: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension ig.
[2024-02-23 14:31:36,147: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension jackknifer.
[2024-02-23 14:31:36,147: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension jackknifernon.
[2024-02-23 14:31:36,147: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension mega.
[2024-02-23 14:31:36,147: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension meganon.
[2024-02-23 14:31:36,147: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension ncbi.
[2024-02-23 14:31:36,148: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension nexus.
[2024-02-23 14:31:36,148: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension nexusnon.
[2024-02-23 14:31:36,148: DEBUG/main] Retrieved datatype module galaxy.datatypes.phylip:Phylip from the datatype registry for extension phylip.
[2024-02-23 14:31:36,148: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension phylipnon.
[2024-02-23 14:31:36,148: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pir.
[2024-02-23 14:31:36,148: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension staden.
[2024-02-23 14:31:36,149: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension swiss.
[2024-02-23 14:31:36,150: DEBUG/main] Retrieved datatype module galaxy.datatypes.msa:Msf from the datatype registry for extension msf.
[2024-02-23 14:31:36,150: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx0.
[2024-02-23 14:31:36,150: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx1.
[2024-02-23 14:31:36,150: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx10.
[2024-02-23 14:31:36,150: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx2.
[2024-02-23 14:31:36,150: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx3.
[2024-02-23 14:31:36,150: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pair.
[2024-02-23 14:31:36,150: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension score.
[2024-02-23 14:31:36,150: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension srs.
[2024-02-23 14:31:36,151: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension srspair.
[2024-02-23 14:31:36,151: DEBUG/main] Retrieved datatype module galaxy.datatypes.annotation:SnapHmm from the datatype registry for extension snaphmm.
[2024-02-23 14:31:36,151: DEBUG/main] Retrieved datatype module galaxy.datatypes.annotation:Augustus from the datatype registry for extension augustus.
[2024-02-23 14:31:36,151: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:ICM from the datatype registry for extension icm.
[2024-02-23 14:31:36,151: DEBUG/main] Retrieved datatype module galaxy.datatypes.msa:InfernalCM from the datatype registry for extension cm.
[2024-02-23 14:31:36,151: DEBUG/main] Retrieved datatype module galaxy.datatypes.msa:Hmmer2 from the datatype registry for extension hmm2.
[2024-02-23 14:31:36,151: DEBUG/main] Retrieved datatype module galaxy.datatypes.msa:Hmmer3 from the datatype registry for extension hmm3.
[2024-02-23 14:31:36,151: DEBUG/main] Retrieved datatype module galaxy.datatypes.msa:Stockholm_1_0 from the datatype registry for extension stockholm.
[2024-02-23 14:31:36,152: DEBUG/main] Retrieved datatype module galaxy.datatypes.msa:MauveXmfa from the datatype registry for extension xmfa.
[2024-02-23 14:31:36,152: DEBUG/main] Retrieved datatype module galaxy.datatypes.microarrays:Cel from the datatype registry for extension cel.
[2024-02-23 14:31:36,152: DEBUG/main] Retrieved datatype module galaxy.datatypes.microarrays:Gpr from the datatype registry for extension gpr.
[2024-02-23 14:31:36,152: DEBUG/main] Retrieved datatype module galaxy.datatypes.microarrays:Gal from the datatype registry for extension gal.
[2024-02-23 14:31:36,152: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension rds.
[2024-02-23 14:31:36,153: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension phyloseq.
[2024-02-23 14:31:36,153: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.
[2024-02-23 14:31:36,153: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.sce.
[2024-02-23 14:31:36,153: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.raw.
[2024-02-23 14:31:36,153: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.msnbase.raw.
[2024-02-23 14:31:36,153: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.findchrompeaks.
[2024-02-23 14:31:36,153: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.group.
[2024-02-23 14:31:36,153: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.retcor.
[2024-02-23 14:31:36,153: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.fillpeaks.
[2024-02-23 14:31:36,153: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.camera.positive.
[2024-02-23 14:31:36,154: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.camera.negative.
[2024-02-23 14:31:36,154: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.camera.quick.
[2024-02-23 14:31:36,154: DEBUG/main] Retrieved datatype module galaxy.datatypes.hdf5:HDF5SummarizedExperiment from the datatype registry for extension rdata.se.
[2024-02-23 14:31:36,154: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension rdock_as.
[2024-02-23 14:31:36,154: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:OxliCountGraph from the datatype registry for extension oxlicg.
[2024-02-23 14:31:36,154: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:OxliNodeGraph from the datatype registry for extension oxling.
[2024-02-23 14:31:36,154: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:OxliTagSet from the datatype registry for extension oxlits.
[2024-02-23 14:31:36,155: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:OxliStopTags from the datatype registry for extension oxlist.
[2024-02-23 14:31:36,155: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:OxliSubset from the datatype registry for extension oxliss.
[2024-02-23 14:31:36,155: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:OxliGraphLabels from the datatype registry for extension oxligl.
[2024-02-23 14:31:36,156: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:STL from the datatype registry for extension stl.
[2024-02-23 14:31:36,156: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:PlyAscii from the datatype registry for extension plyascii.
[2024-02-23 14:31:36,156: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:PlyBinary from the datatype registry for extension plybinary.
[2024-02-23 14:31:36,156: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:VtkAscii from the datatype registry for extension vtkascii.
[2024-02-23 14:31:36,156: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:VtkBinary from the datatype registry for extension vtkbinary.
[2024-02-23 14:31:36,157: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Biom1 from the datatype registry for extension biom1.
[2024-02-23 14:31:36,157: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Biom2 from the datatype registry for extension biom2.
[2024-02-23 14:31:36,157: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:MashSketch from the datatype registry for extension msh.
[2024-02-23 14:31:36,157: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:ScIdx from the datatype registry for extension scidx.
[2024-02-23 14:31:36,164: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:SMILES from the datatype registry for extension smi.
[2024-02-23 14:31:36,165: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:SDF from the datatype registry for extension sdf.
[2024-02-23 14:31:36,165: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:InChI from the datatype registry for extension inchi.
[2024-02-23 14:31:36,165: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:MOL from the datatype registry for extension mol.
[2024-02-23 14:31:36,165: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:MOL2 from the datatype registry for extension mol2.
[2024-02-23 14:31:36,165: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:CML from the datatype registry for extension cml.
[2024-02-23 14:31:36,165: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:FPS from the datatype registry for extension fps.
[2024-02-23 14:31:36,166: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:OBFS from the datatype registry for extension obfs.
[2024-02-23 14:31:36,166: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:DRF from the datatype registry for extension drf.
[2024-02-23 14:31:36,166: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:PHAR from the datatype registry for extension phar.
[2024-02-23 14:31:36,166: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:PDB from the datatype registry for extension pdb.
[2024-02-23 14:31:36,166: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:PDBQT from the datatype registry for extension pdbqt.
[2024-02-23 14:31:36,166: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:PQR from the datatype registry for extension pqr.
[2024-02-23 14:31:36,166: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:Cell from the datatype registry for extension cell.
[2024-02-23 14:31:36,166: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:CIF from the datatype registry for extension cif.
[2024-02-23 14:31:36,166: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:XYZ from the datatype registry for extension xyz.
[2024-02-23 14:31:36,166: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:ExtendedXYZ from the datatype registry for extension extxyz.
[2024-02-23 14:31:36,166: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Trr from the datatype registry for extension trr.
[2024-02-23 14:31:36,167: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Dcd from the datatype registry for extension dcd.
[2024-02-23 14:31:36,167: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension top.
[2024-02-23 14:31:36,167: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension prmtop.
[2024-02-23 14:31:36,167: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension itp.
[2024-02-23 14:31:36,167: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension mdp.
[2024-02-23 14:31:36,167: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension ndx.
[2024-02-23 14:31:36,167: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension xvg.
[2024-02-23 14:31:36,167: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Xtc from the datatype registry for extension xtc.
[2024-02-23 14:31:36,167: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Cpt from the datatype registry for extension cpt.
[2024-02-23 14:31:36,168: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Edr from the datatype registry for extension edr.
[2024-02-23 14:31:36,168: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension tpr.
[2024-02-23 14:31:36,168: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:GRO from the datatype registry for extension gro.
[2024-02-23 14:31:36,168: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension inpcrd.
[2024-02-23 14:31:36,168: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Vel from the datatype registry for extension vel.
[2024-02-23 14:31:36,168: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:grd from the datatype registry for extension grd.
[2024-02-23 14:31:36,168: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:grdtgz from the datatype registry for extension grd.tgz.
[2024-02-23 14:31:36,168: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Otu from the datatype registry for extension mothur.otu.
[2024-02-23 14:31:36,168: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Otu from the datatype registry for extension mothur.list.
[2024-02-23 14:31:36,169: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Sabund from the datatype registry for extension mothur.sabund.
[2024-02-23 14:31:36,169: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Sabund from the datatype registry for extension mothur.rabund.
[2024-02-23 14:31:36,169: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:GroupAbund from the datatype registry for extension mothur.shared.
[2024-02-23 14:31:36,169: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:GroupAbund from the datatype registry for extension mothur.relabund.
[2024-02-23 14:31:36,169: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Names from the datatype registry for extension mothur.names.
[2024-02-23 14:31:36,169: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Group from the datatype registry for extension mothur.design.
[2024-02-23 14:31:36,169: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Summary from the datatype registry for extension mothur.summary.
[2024-02-23 14:31:36,169: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Group from the datatype registry for extension mothur.groups.
[2024-02-23 14:31:36,169: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Oligos from the datatype registry for extension mothur.oligos.
[2024-02-23 14:31:36,170: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Fasta from the datatype registry for extension mothur.align.
[2024-02-23 14:31:36,170: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:AccNos from the datatype registry for extension mothur.accnos.
[2024-02-23 14:31:36,170: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:AccNos from the datatype registry for extension mothur.otulabels.
[2024-02-23 14:31:36,170: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension mothur.otu.corr.
[2024-02-23 14:31:36,170: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:SecondaryStructureMap from the datatype registry for extension mothur.map.
[2024-02-23 14:31:36,170: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:AlignCheck from the datatype registry for extension mothur.align.check.
[2024-02-23 14:31:36,170: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:AlignReport from the datatype registry for extension mothur.align.report.
[2024-02-23 14:31:36,170: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:LaneMask from the datatype registry for extension mothur.filter.
[2024-02-23 14:31:36,170: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:DistanceMatrix from the datatype registry for extension mothur.dist.
[2024-02-23 14:31:36,170: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension mothur.tre.
[2024-02-23 14:31:36,171: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:PairwiseDistanceMatrix from the datatype registry for extension mothur.pair.dist.
[2024-02-23 14:31:36,171: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:SquareDistanceMatrix from the datatype registry for extension mothur.square.dist.
[2024-02-23 14:31:36,171: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:LowerTriangleDistanceMatrix from the datatype registry for extension mothur.lower.dist.
[2024-02-23 14:31:36,171: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:RefTaxonomy from the datatype registry for extension mothur.ref.taxonomy.
[2024-02-23 14:31:36,171: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:RefTaxonomy from the datatype registry for extension mothur.seq.taxonomy.
[2024-02-23 14:31:36,171: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:RefTaxonomy from the datatype registry for extension mothur.rdp.taxonomy.
[2024-02-23 14:31:36,171: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:ConsensusTaxonomy from the datatype registry for extension mothur.cons.taxonomy.
[2024-02-23 14:31:36,171: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:TaxonomySummary from the datatype registry for extension mothur.tax.summary.
[2024-02-23 14:31:36,171: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Frequency from the datatype registry for extension mothur.freq.
[2024-02-23 14:31:36,171: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Quantile from the datatype registry for extension mothur.quan.
[2024-02-23 14:31:36,172: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Quantile from the datatype registry for extension mothur.filtered.quan.
[2024-02-23 14:31:36,172: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Quantile from the datatype registry for extension mothur.masked.quan.
[2024-02-23 14:31:36,172: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Quantile from the datatype registry for extension mothur.filtered.masked.quan.
[2024-02-23 14:31:36,172: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Axes from the datatype registry for extension mothur.axes.
[2024-02-23 14:31:36,172: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:SffFlow from the datatype registry for extension mothur.sff.flow.
[2024-02-23 14:31:36,172: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:CountTable from the datatype registry for extension mothur.count_table.
[2024-02-23 14:31:36,174: DEBUG/main] Retrieved datatype module galaxy.datatypes.neo4j:Neo4jDB from the datatype registry for extension neostore.
[2024-02-23 14:31:36,174: DEBUG/main] Retrieved datatype module galaxy.datatypes.neo4j:Neo4jDBzip from the datatype registry for extension neostore.zip.
[2024-02-23 14:31:36,175: DEBUG/main] Retrieved datatype module galaxy.datatypes.tracks:UCSCTrackHub from the datatype registry for extension trackhub.
[2024-02-23 14:31:36,175: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:BlastXml from the datatype registry for extension blastxml.
[2024-02-23 14:31:36,176: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:BlastNucDb from the datatype registry for extension blastdbn.
[2024-02-23 14:31:36,176: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:BlastProtDb from the datatype registry for extension blastdbp.
[2024-02-23 14:31:36,176: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:BlastDomainDb from the datatype registry for extension blastdbd.
[2024-02-23 14:31:36,176: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:LastDb from the datatype registry for extension lastdb.
[2024-02-23 14:31:36,176: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:BlastNucDb5 from the datatype registry for extension blastdbn5.
[2024-02-23 14:31:36,176: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:BlastProtDb5 from the datatype registry for extension blastdbp5.
[2024-02-23 14:31:36,176: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:BlastDomainDb5 from the datatype registry for extension blastdbd5.
[2024-02-23 14:31:36,176: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:GenericAsn1 from the datatype registry for extension maskinfo-asn1.
[2024-02-23 14:31:36,177: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:GenericAsn1Binary from the datatype registry for extension maskinfo-asn1-binary.
[2024-02-23 14:31:36,177: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:GenericAsn1 from the datatype registry for extension pssm-asn1.
[2024-02-23 14:31:36,177: DEBUG/main] Retrieved datatype module galaxy.datatypes.plant_tribes:PlantTribesKsComponents from the datatype registry for extension ptkscmp.
[2024-02-23 14:31:36,177: DEBUG/main] Retrieved datatype module galaxy.datatypes.plant_tribes:Smat from the datatype registry for extension smat.
[2024-02-23 14:31:36,177: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:GenotypeMatrix from the datatype registry for extension alohomora_gts.
[2024-02-23 14:31:36,178: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension alohomora_map.
[2024-02-23 14:31:36,178: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension alohomora_maf.
[2024-02-23 14:31:36,178: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension alohomora_ped.
[2024-02-23 14:31:36,178: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension linkage_pedin.
[2024-02-23 14:31:36,178: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:DataIn from the datatype registry for extension linkage_datain.
[2024-02-23 14:31:36,178: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:MarkerMap from the datatype registry for extension linkage_map.
[2024-02-23 14:31:36,178: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension allegro_ihaplo.
[2024-02-23 14:31:36,178: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension allegro_descent.
[2024-02-23 14:31:36,179: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:AllegroLOD from the datatype registry for extension allegro_fparam.
[2024-02-23 14:31:36,179: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:IdeasPre from the datatype registry for extension ideaspre.
[2024-02-23 14:31:36,179: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:Sbml from the datatype registry for extension sbml.
[2024-02-23 14:31:36,179: DEBUG/main] Retrieved datatype module galaxy.datatypes.spaln:SpalnNuclDb from the datatype registry for extension spalndbnp.
[2024-02-23 14:31:36,179: DEBUG/main] Retrieved datatype module galaxy.datatypes.spaln:SpalnProtDb from the datatype registry for extension spalndba.
[2024-02-23 14:31:36,180: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension dada2_dada.
[2024-02-23 14:31:36,180: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension dada2_errorrates.
[2024-02-23 14:31:36,180: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension dada2_mergepairs.
[2024-02-23 14:31:36,180: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension dada2_sequencetable.
[2024-02-23 14:31:36,180: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension dada2_uniques.
[2024-02-23 14:31:36,180: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension ampvis2.
[2024-02-23 14:31:36,180: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension ckpt.
[2024-02-23 14:31:36,180: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension tgz.
[2024-02-23 14:31:36,192: DEBUG/main] Retrieved datatype module galaxy.datatypes.media:Wav from the datatype registry for extension wav.
[2024-02-23 14:31:36,192: DEBUG/main] Retrieved datatype module galaxy.datatypes.media:Mp3 from the datatype registry for extension mp3.
[2024-02-23 14:31:36,193: DEBUG/main] Retrieved datatype module galaxy.datatypes.media:Mkv from the datatype registry for extension mkv.
[2024-02-23 14:31:36,193: DEBUG/main] Retrieved datatype module galaxy.datatypes.media:Mp4 from the datatype registry for extension mp4.
[2024-02-23 14:31:36,193: DEBUG/main] Retrieved datatype module galaxy.datatypes.media:Flv from the datatype registry for extension flv.
[2024-02-23 14:31:36,193: DEBUG/main] Retrieved datatype module galaxy.datatypes.media:Mpg from the datatype registry for extension mpg.
[2024-02-23 14:31:36,195: DEBUG/main] Retrieved datatype module galaxy.datatypes.speech:TextGrid from the datatype registry for extension textgrid.
[2024-02-23 14:31:36,195: DEBUG/main] Retrieved datatype module galaxy.datatypes.speech:BPF from the datatype registry for extension par.
[2024-02-23 14:31:36,195: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension ffindex.
[2024-02-23 14:31:36,196: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Data from the datatype registry for extension ffdata.
[2024-02-23 14:31:36,196: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Pretext from the datatype registry for extension pretext.
[2024-02-23 14:31:36,196: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Html from the datatype registry for extension immuneml_receptors.html.
[2024-02-23 14:31:36,197: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:HexrdMaterials from the datatype registry for extension hexrd.materials.h5.
[2024-02-23 14:31:36,197: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Npz from the datatype registry for extension npz.
[2024-02-23 14:31:36,197: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:HexrdImagesNpz from the datatype registry for extension hexrd.images.npz.
[2024-02-23 14:31:36,197: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:HexrdEtaOmeNpz from the datatype registry for extension hexrd.eta_ome.npz.
[2024-02-23 14:31:36,198: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Npz from the datatype registry for extension hexrd.scored_orientations.npz.
[2024-02-23 14:31:36,198: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension hexrd.accepted_orientations.
[2024-02-23 14:31:36,198: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Yaml from the datatype registry for extension hexrd.yml.
[2024-02-23 14:31:36,199: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperTess from the datatype registry for extension neper.tess.
[2024-02-23 14:31:36,199: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperTesr from the datatype registry for extension neper.tesr.
[2024-02-23 14:31:36,199: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperPoints from the datatype registry for extension neper.points.
[2024-02-23 14:31:36,199: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperPointsTabular from the datatype registry for extension neper.points.tsv.
[2024-02-23 14:31:36,199: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperMultiScaleCell from the datatype registry for extension neper.mscell.
[2024-02-23 14:31:36,200: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:GmshMsh from the datatype registry for extension gmsh.msh.
[2024-02-23 14:31:36,200: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:GmshGeo from the datatype registry for extension gmsh.geo.
[2024-02-23 14:31:36,200: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:ZsetGeof from the datatype registry for extension zset.geof.
[2024-02-23 14:31:36,200: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension stl.
[2024-02-23 14:31:36,200: DEBUG/main] Overriding conflicting datatype with extension 'stl', using datatype from /scratch/rico/galaxy/lib/galaxy/config/sample/datatypes_conf.xml.sample.
[2024-02-23 14:31:36,201: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Text from the datatype registry for extension pov.
[2024-02-23 14:31:36,201: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:PithyaResult from the datatype registry for extension pithya.result.
[2024-02-23 14:31:36,201: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:PithyaProperty from the datatype registry for extension pithya.property.
[2024-02-23 14:31:36,201: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:PithyaModel from the datatype registry for extension pithya.model.
[2024-02-23 14:31:36,202: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:BCSLts from the datatype registry for extension bcsl.ts.
[2024-02-23 14:31:36,202: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:BCSLmodel from the datatype registry for extension bcsl.model.
[2024-02-23 14:31:36,202: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:StormSample from the datatype registry for extension storm.sample.
[2024-02-23 14:31:36,202: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:StormCheck from the datatype registry for extension storm.check.
[2024-02-23 14:31:36,202: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:CTLresult from the datatype registry for extension ctl.result.
[2024-02-23 14:31:36,202: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Castep from the datatype registry for extension castep.
[2024-02-23 14:31:36,202: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Param from the datatype registry for extension param.
[2024-02-23 14:31:36,202: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:FormattedDensity from the datatype registry for extension den_fmt.
[2024-02-23 14:31:36,203: DEBUG/main] Retrieved datatype module galaxy.datatypes.larch:AthenaProject from the datatype registry for extension prj.
[2024-02-23 14:31:36,203: DEBUG/main] Retrieved datatype module galaxy.datatypes.larch:FEFFInput from the datatype registry for extension inp.
[2024-02-23 14:31:36,203: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:CSV from the datatype registry for extension sp.
[2024-02-23 14:31:36,203: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:CSV from the datatype registry for extension gds.
[2024-02-23 14:31:36,203: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:CSV from the datatype registry for extension feff.
[2024-02-23 14:31:36,203: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension feffit.
[2024-02-23 14:31:36,203: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension bil.
[2024-02-23 14:31:36,204: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension hdr.
[2024-02-23 14:31:36,204: DEBUG/main] Retrieved datatype module galaxy.datatypes.gis:Shapefile from the datatype registry for extension shp.
[2024-02-23 14:31:36,204: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:FITS from the datatype registry for extension fits.
[2024-02-23 14:31:36,205: DEBUG/main] Retrieved datatype module galaxy.datatypes.chain:Chain from the datatype registry for extension chain.
[2024-02-23 14:31:36,205: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.plant_tribes:PlantTribesKsComponents'
[2024-02-23 14:31:36,205: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.plant_tribes:Smat'
[2024-02-23 14:31:36,205: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Sabund'
[2024-02-23 14:31:36,205: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Otu'
[2024-02-23 14:31:36,205: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:GroupAbund'
[2024-02-23 14:31:36,205: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:SecondaryStructureMap'
[2024-02-23 14:31:36,205: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:LowerTriangleDistanceMatrix'
[2024-02-23 14:31:36,205: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:SquareDistanceMatrix'
[2024-02-23 14:31:36,205: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:PairwiseDistanceMatrix'
[2024-02-23 14:31:36,205: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Oligos'
[2024-02-23 14:31:36,205: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Quantile'
[2024-02-23 14:31:36,206: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Frequency'
[2024-02-23 14:31:36,206: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:LaneMask'
[2024-02-23 14:31:36,206: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:RefTaxonomy'
[2024-02-23 14:31:36,206: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Axes'
[2024-02-23 14:31:36,206: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:PlyAscii'
[2024-02-23 14:31:36,206: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:PlyBinary'
[2024-02-23 14:31:36,206: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:VtkAscii'
[2024-02-23 14:31:36,206: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:VtkBinary'
[2024-02-23 14:31:36,206: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:NeperTess'
[2024-02-23 14:31:36,206: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:NeperTesr'
[2024-02-23 14:31:36,206: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:GmshMsh'
[2024-02-23 14:31:36,206: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.goldenpath:GoldenPath'
[2024-02-23 14:31:36,206: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:ScIdx'
[2024-02-23 14:31:36,206: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:Vcf'
[2024-02-23 14:31:36,206: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:JP2'
[2024-02-23 14:31:36,206: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:TwoBit'
[2024-02-23 14:31:36,206: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:GeminiSQLite'
[2024-02-23 14:31:36,206: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:SQmass'
[2024-02-23 14:31:36,206: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:MzSQlite'
[2024-02-23 14:31:36,206: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:OSW'
[2024-02-23 14:31:36,207: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:PQP'
[2024-02-23 14:31:36,207: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:IdpDB'
[2024-02-23 14:31:36,207: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:ElibSQlite'
[2024-02-23 14:31:36,207: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:DlibSQlite'
[2024-02-23 14:31:36,207: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:BlibSQlite'
[2024-02-23 14:31:36,207: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:ChiraSQLite'
[2024-02-23 14:31:36,207: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:CuffDiffSQlite'
[2024-02-23 14:31:36,207: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:GAFASQLite'
[2024-02-23 14:31:36,207: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:NcbiTaxonomySQlite'
[2024-02-23 14:31:36,207: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:SQlite'
[2024-02-23 14:31:36,207: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:H5MLM'
[2024-02-23 14:31:36,207: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Cool'
[2024-02-23 14:31:36,207: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:MCool'
[2024-02-23 14:31:36,207: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Loom'
[2024-02-23 14:31:36,207: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Anndata'
[2024-02-23 14:31:36,207: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Biom2'
[2024-02-23 14:31:36,207: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:HexrdMaterials'
[2024-02-23 14:31:36,207: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:H5'
[2024-02-23 14:31:36,207: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Grib'
[2024-02-23 14:31:36,207: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:HexrdImagesNpz'
[2024-02-23 14:31:36,207: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:HexrdEtaOmeNpz'
[2024-02-23 14:31:36,208: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Npz'
[2024-02-23 14:31:36,208: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Bam'
[2024-02-23 14:31:36,208: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:BamQuerynameSorted'
[2024-02-23 14:31:36,208: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:BamNative'
[2024-02-23 14:31:36,208: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:CRAM'
[2024-02-23 14:31:36,208: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Sff'
[2024-02-23 14:31:36,208: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Sra'
[2024-02-23 14:31:36,208: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:NetCDF'
[2024-02-23 14:31:36,208: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:DAA'
[2024-02-23 14:31:36,208: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:RMA6'
[2024-02-23 14:31:36,208: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:DMND'
[2024-02-23 14:31:36,208: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Parquet'
[2024-02-23 14:31:36,208: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:BafTar'
[2024-02-23 14:31:36,208: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:TdfTar'
[2024-02-23 14:31:36,208: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:MassHunterTar'
[2024-02-23 14:31:36,208: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:MassLynxTar'
[2024-02-23 14:31:36,208: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:YepTar'
[2024-02-23 14:31:36,208: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:WiffTar'
[2024-02-23 14:31:36,208: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Fast5ArchiveGz'
[2024-02-23 14:31:36,208: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Fast5ArchiveBz2'
[2024-02-23 14:31:36,208: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Fast5Archive'
[2024-02-23 14:31:36,209: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Meryldb'
[2024-02-23 14:31:36,209: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Bref3'
[2024-02-23 14:31:36,209: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:PostgresqlArchive'
[2024-02-23 14:31:36,209: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:ICM'
[2024-02-23 14:31:36,209: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Idat'
[2024-02-23 14:31:36,209: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Trr'
[2024-02-23 14:31:36,209: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Dcd'
[2024-02-23 14:31:36,209: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Xtc'
[2024-02-23 14:31:36,209: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Cpt'
[2024-02-23 14:31:36,209: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Edr'
[2024-02-23 14:31:36,209: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Vel'
[2024-02-23 14:31:36,209: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Xlsx'
[2024-02-23 14:31:36,209: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.qiime2:QIIME2Metadata'
[2024-02-23 14:31:36,209: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.qiime2:QIIME2Artifact'
[2024-02-23 14:31:36,209: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.qiime2:QIIME2Visualization'
[2024-02-23 14:31:36,209: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:CompressedZipArchive'
[2024-02-23 14:31:36,209: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Pretext'
[2024-02-23 14:31:36,210: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.annotation:Augustus'
[2024-02-23 14:31:36,210: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.xml:Owl'
[2024-02-23 14:31:36,210: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.chain:Chain'
[2024-02-23 14:31:36,210: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.triples:Rdf'
[2024-02-23 14:31:36,210: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.blast:BlastXml'
[2024-02-23 14:31:36,210: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Gifti'
[2024-02-23 14:31:36,210: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.xml:Phyloxml'
[2024-02-23 14:31:36,210: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.xml:Dzi'
[2024-02-23 14:31:36,210: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.xml:Sbml'
[2024-02-23 14:31:36,210: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Dta2d'
[2024-02-23 14:31:36,210: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Edta'
[2024-02-23 14:31:36,210: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:ConsensusXML'
[2024-02-23 14:31:36,210: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:IdXML'
[2024-02-23 14:31:36,210: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:FeatureXML'
[2024-02-23 14:31:36,210: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MascotXML'
[2024-02-23 14:31:36,210: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Mgf'
[2024-02-23 14:31:36,210: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Ms2'
[2024-02-23 14:31:36,210: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Msp'
[2024-02-23 14:31:36,211: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzData'
[2024-02-23 14:31:36,211: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzIdentML'
[2024-02-23 14:31:36,211: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzML'
[2024-02-23 14:31:36,211: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzQuantML'
[2024-02-23 14:31:36,211: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzTab'
[2024-02-23 14:31:36,211: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzTab2'
[2024-02-23 14:31:36,211: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:ParamXml'
[2024-02-23 14:31:36,211: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzXML'
[2024-02-23 14:31:36,211: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:NmrML'
[2024-02-23 14:31:36,211: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Kroenik'
[2024-02-23 14:31:36,211: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:PepList'
[2024-02-23 14:31:36,211: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:PSMS'
[2024-02-23 14:31:36,211: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:PepXml'
[2024-02-23 14:31:36,211: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:ProtXML'
[2024-02-23 14:31:36,211: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:SPLib'
[2024-02-23 14:31:36,211: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:TandemXML'
[2024-02-23 14:31:36,211: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:ThermoRAW'
[2024-02-23 14:31:36,212: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:TraML'
[2024-02-23 14:31:36,212: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:TrafoXML'
[2024-02-23 14:31:36,212: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:UniProtXML'
[2024-02-23 14:31:36,212: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:XquestXML'
[2024-02-23 14:31:36,212: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:XquestSpecXML'
[2024-02-23 14:31:36,212: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:QCML'
[2024-02-23 14:31:36,212: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Wiff'
[2024-02-23 14:31:36,212: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:PEFF'
[2024-02-23 14:31:36,212: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:CML'
[2024-02-23 14:31:36,212: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.xml:GenericXml'
[2024-02-23 14:31:36,212: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.triples:HDT'
[2024-02-23 14:31:36,212: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.triples:Turtle'
[2024-02-23 14:31:36,212: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.triples:NTriples'
[2024-02-23 14:31:36,212: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.triples:Jsonld'
[2024-02-23 14:31:36,212: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Maf'
[2024-02-23 14:31:36,212: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Lav'
[2024-02-23 14:31:36,212: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:MemePsp'
[2024-02-23 14:31:36,212: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Fastg'
[2024-02-23 14:31:36,213: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:csFasta'
[2024-02-23 14:31:36,213: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.qualityscore:QualityScoreSOLiD'
[2024-02-23 14:31:36,213: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.qualityscore:QualityScore454'
[2024-02-23 14:31:36,213: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:SDF'
[2024-02-23 14:31:36,213: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:PDB'
[2024-02-23 14:31:36,213: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:Cell'
[2024-02-23 14:31:36,213: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:CIF'
[2024-02-23 14:31:36,213: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:ExtendedXYZ'
[2024-02-23 14:31:36,213: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:XYZ'
[2024-02-23 14:31:36,213: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:MOL2'
[2024-02-23 14:31:36,213: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:InChI'
[2024-02-23 14:31:36,213: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:FPS'
[2024-02-23 14:31:36,213: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:PQR'
[2024-02-23 14:31:36,213: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:GRO'
[2024-02-23 14:31:36,213: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.phylip:Phylip'
[2024-02-23 14:31:36,213: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Fasta'
[2024-02-23 14:31:36,214: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:FastqCSSanger'
[2024-02-23 14:31:36,214: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:FastqSanger'
[2024-02-23 14:31:36,214: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Fastq'
[2024-02-23 14:31:36,214: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:Wiggle'
[2024-02-23 14:31:36,214: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Html'
[2024-02-23 14:31:36,214: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Pdf'
[2024-02-23 14:31:36,214: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Axt'
[2024-02-23 14:31:36,214: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Genbank'
[2024-02-23 14:31:36,214: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:Bed'
[2024-02-23 14:31:36,214: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:CustomTrack'
[2024-02-23 14:31:36,214: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:Gtf'
[2024-02-23 14:31:36,214: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:Gff'
[2024-02-23 14:31:36,214: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:Gff3'
[2024-02-23 14:31:36,214: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:Pileup'
[2024-02-23 14:31:36,215: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:Psl'
[2024-02-23 14:31:36,215: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Paf'
[2024-02-23 14:31:36,215: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:Interval'
[2024-02-23 14:31:36,215: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:Sam'
[2024-02-23 14:31:36,215: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.data:Newick'
[2024-02-23 14:31:36,215: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.data:Nexus'
[2024-02-23 14:31:36,215: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:IQTree'
[2024-02-23 14:31:36,215: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Obo'
[2024-02-23 14:31:36,215: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Arff'
[2024-02-23 14:31:36,215: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Ipynb'
[2024-02-23 14:31:36,215: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Biom1'
[2024-02-23 14:31:36,215: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:ImgtJson'
[2024-02-23 14:31:36,215: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:GeoJson'
[2024-02-23 14:31:36,215: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:PithyaResult'
[2024-02-23 14:31:36,216: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:BCSLts'
[2024-02-23 14:31:36,216: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Json'
[2024-02-23 14:31:36,216: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.genetics:GenotypeMatrix'
[2024-02-23 14:31:36,216: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.genetics:DataIn'
[2024-02-23 14:31:36,216: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.genetics:MarkerMap'
[2024-02-23 14:31:36,216: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.genetics:AllegroLOD'
[2024-02-23 14:31:36,216: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:RNADotPlotMatrix'
[2024-02-23 14:31:36,216: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:DotBracket'
[2024-02-23 14:31:36,216: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:CMAP'
[2024-02-23 14:31:36,216: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:ConnectivityTable'
[2024-02-23 14:31:36,216: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:CSV'
[2024-02-23 14:31:36,216: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.metacyto:mSummary'
[2024-02-23 14:31:36,216: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.metacyto:mStats'
[2024-02-23 14:31:36,216: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:TSV'
[2024-02-23 14:31:36,216: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:MatrixMarket'
[2024-02-23 14:31:36,217: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.msa:Hmmer2'
[2024-02-23 14:31:36,217: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.msa:Hmmer3'
[2024-02-23 14:31:36,217: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.msa:Stockholm_1_0'
[2024-02-23 14:31:36,217: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.msa:MauveXmfa'
[2024-02-23 14:31:36,217: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.msa:InfernalCM'
[2024-02-23 14:31:36,217: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.annotation:SnapHmm'
[2024-02-23 14:31:36,217: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.microarrays:Cel'
[2024-02-23 14:31:36,217: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.microarrays:Gpr'
[2024-02-23 14:31:36,217: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.microarrays:Gal'
[2024-02-23 14:31:36,217: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:RData'
[2024-02-23 14:31:36,217: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:RDS'
[2024-02-23 14:31:36,217: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Mrc2014'
[2024-02-23 14:31:36,217: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Jpg'
[2024-02-23 14:31:36,217: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Png'
[2024-02-23 14:31:36,218: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:OMETiff'
[2024-02-23 14:31:36,218: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Tiff'
[2024-02-23 14:31:36,218: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Bmp'
[2024-02-23 14:31:36,218: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Gif'
[2024-02-23 14:31:36,218: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Im'
[2024-02-23 14:31:36,218: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Pcd'
[2024-02-23 14:31:36,218: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Pcx'
[2024-02-23 14:31:36,218: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Ppm'
[2024-02-23 14:31:36,218: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Psd'
[2024-02-23 14:31:36,218: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Xbm'
[2024-02-23 14:31:36,218: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Rgb'
[2024-02-23 14:31:36,218: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Pbm'
[2024-02-23 14:31:36,218: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Pgm'
[2024-02-23 14:31:36,218: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Xpm'
[2024-02-23 14:31:36,219: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Eps'
[2024-02-23 14:31:36,219: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Rast'
[2024-02-23 14:31:36,219: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Tck'
[2024-02-23 14:31:36,219: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Trk'
[2024-02-23 14:31:36,219: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Nifti1'
[2024-02-23 14:31:36,219: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Nifti2'
[2024-02-23 14:31:36,219: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Star'
[2024-02-23 14:31:36,219: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.media:Wav'
[2024-02-23 14:31:36,219: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.media:Mkv'
[2024-02-23 14:31:36,219: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.media:Mp3'
[2024-02-23 14:31:36,219: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.media:Mp4'
[2024-02-23 14:31:36,219: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.media:Flv'
[2024-02-23 14:31:36,219: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.media:Mpg'
[2024-02-23 14:31:36,219: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.speech:TextGrid'
[2024-02-23 14:31:36,220: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.speech:BPF'
[2024-02-23 14:31:36,220: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.larch:FEFFInput'
[2024-02-23 14:31:36,220: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.larch:AthenaProject'
[2024-02-23 14:31:36,220: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Castep'
[2024-02-23 14:31:36,220: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:CTLresult'
[2024-02-23 14:31:36,220: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:FormattedDensity'
[2024-02-23 14:31:36,220: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Param'
[2024-02-23 14:31:36,220: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Yaml'
[2024-02-23 14:31:36,220: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliCountGraph'
[2024-02-23 14:31:36,220: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliNodeGraph'
[2024-02-23 14:31:36,220: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliTagSet'
[2024-02-23 14:31:36,220: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliStopTags'
[2024-02-23 14:31:36,220: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliSubset'
[2024-02-23 14:31:36,220: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliGraphLabels'
[2024-02-23 14:31:36,221: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:FITS'
[2024-02-23 14:31:36,221: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.neo4j:Neo4jDBzip'
[2024-02-23 14:31:36,221: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:PithyaProperty'
[2024-02-23 14:31:36,221: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:PithyaModel'
[2024-02-23 14:31:36,221: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:BCSLmodel'
[2024-02-23 14:31:36,221: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:StormSample'
[2024-02-23 14:31:36,221: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:StormCheck'
[2024-02-23 14:31:36,228: DEBUG/main] Build site file [tool-data/shared/ucsc/ucsc_build_sites.txt] not found using sample [tool-data/shared/ucsc/ucsc_build_sites.txt.sample].
[2024-02-23 14:31:36,228: DEBUG/main] Loaded build site 'ucsc': tool-data/shared/ucsc/ucsc_build_sites.txt.sample with display sites: ['main', 'test', 'archaea', 'ucla']
[2024-02-23 14:31:36,230: DEBUG/main] Loaded build site 'gbrowse': tool-data/shared/gbrowse/gbrowse_build_sites.txt with display sites: ['modencode', 'sgd_yeast', 'tair', 'wormbase', 'wormbase_ws120', 'wormbase_ws140', 'wormbase_ws170', 'wormbase_ws180', 'wormbase_ws190', 'wormbase_ws200', 'wormbase_ws204', 'wormbase_ws210', 'wormbase_ws220', 'wormbase_ws225']
[2024-02-23 14:31:36,230: DEBUG/main] Loaded build site 'ensembl': tool-data/shared/ensembl/ensembl_sites.txt
[2024-02-23 14:31:36,231: DEBUG/main] Loaded build site 'ensembl_data_url': tool-data/shared/ensembl/ensembl_sites_data_URL.txt
[2024-02-23 14:31:36,231: DEBUG/main] Build site file [tool-data/shared/igv/igv_build_sites.txt] not found using sample [tool-data/shared/igv/igv_build_sites.txt.sample].
[2024-02-23 14:31:36,231: DEBUG/main] Loaded build site 'igv': tool-data/shared/igv/igv_build_sites.txt.sample
[2024-02-23 14:31:36,231: DEBUG/main] Build site file [tool-data/shared/rviewer/rviewer_build_sites.txt] not found using sample [tool-data/shared/rviewer/rviewer_build_sites.txt.sample].
[2024-02-23 14:31:36,231: DEBUG/main] Loaded build site 'rviewer': tool-data/shared/rviewer/rviewer_build_sites.txt.sample
[2024-02-23 14:31:36,235: DEBUG/main] Loading references to tool sheds from /tmp/tmpqrlh6ih1/tool_sheds_conf.xml
[2024-02-23 14:31:36,235: DEBUG/main] Loaded reference to tool shed: Target Shed
[2024-02-23 14:31:36,236: INFO/main] Successfully executed Celery task clean_object_store_caches to prune object store cache directories clean_object_store_caches to prune object store cache directories (0.416 ms)
[2024-02-23 14:31:36,258: INFO/main] Task galaxy.clean_object_store_caches[0cd32a96-9d0e-4f4d-9772-212740dc8b8c] succeeded in 1.1198743890272453s: None

==> /tmp/tmpqrlh6ih1/gravity/log/gunicorn.log <==
uvicorn.access INFO 2024-02-23 14:31:39,245 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59058 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:39,246 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59042 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:41,884 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59064 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:44,914 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59080 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:47,947 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58360 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:49,232 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58360 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:50,978 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58360 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:54,007 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58364 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:57,035 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33278 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:31:59,235 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33288 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:32:00,061 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33288 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:32:03,091 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33290 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:32:06,121 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51182 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:32:09,178 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51190 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:32:09,235 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51190 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:32:12,215 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51200 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:32:15,244 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51208 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:32:18,272 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49292 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:32:19,237 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49292 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:32:21,303 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49304 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:32:24,334 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49306 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:32:27,364 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:52516 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:32:29,237 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:52516 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:32:30,394 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:52516 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:32:34,227 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:52530 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:32:40,226 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:55960 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:32:50,229 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:47220 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:33:01,227 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:38834 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:33:11,237 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:54950 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:33:22,228 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51772 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:33:35,225 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:39714 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:34:03,233 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:32804 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:34:36,223 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:43248 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:35:03,231 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49414 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:35:37,224 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:54092 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:35:47,545 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33818 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:35:47,547 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33804 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:35:50,579 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33828 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:35:53,609 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33832 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:35:56,638 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:48808 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:35:57,528 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:48808 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:35:59,667 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:48810 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:02,692 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:48822 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:05,722 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40204 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:07,532 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40204 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:08,754 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40204 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:11,784 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40210 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:14,812 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40220 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:17,532 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46790 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:17,840 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46790 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:20,868 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46792 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:23,898 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46796 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:26,927 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:44190 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:27,535 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:44190 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:29,958 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:44196 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:32,986 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:44202 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200

==> /tmp/tmpqrlh6ih1/gravity/log/celery-beat.log <==
[2024-02-23 14:36:34,242: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-02-23 14:36:34,243: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /tmp/tmpqrlh6ih1/gravity/log/gunicorn.log <==
uvicorn.access INFO 2024-02-23 14:36:36,013 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:47172 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:37,534 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:47172 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:39,042 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:47172 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:42,077 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:47182 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:45,106 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:47188 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:47,538 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51220 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:48,135 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51220 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:51,166 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51236 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:54,194 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51252 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:57,223 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59054 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:36:57,539 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59054 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:00,252 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59056 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:03,283 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59058 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:06,312 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40442 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:07,540 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40442 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:09,340 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40442 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:12,369 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40452 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:15,399 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40466 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:17,540 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33438 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:18,427 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33438 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:21,460 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33454 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:24,489 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33460 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:27,518 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:35406 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:27,540 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:35420 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:30,550 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:35436 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:33,583 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:35442 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:36,611 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:48378 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:37,543 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:48378 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:39,651 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:48384 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:42,682 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:48392 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:45,764 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:42318 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:47,545 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:42318 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:48,830 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:42318 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:51,858 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:42334 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:54,890 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:42350 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:57,545 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58970 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:37:57,918 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58970 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:01,223 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58972 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:05,315 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58982 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:07,464 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:38296 - "GET /api/tools/ncbi_fcs_adaptor/build?version=latest&tool_version=latest HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:07,569 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:38296 - "POST /api/tools/ncbi_fcs_adaptor/build HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:07,598 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:38312 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:08,342 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:38312 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:11,372 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:38318 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:14,401 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:38326 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:17,430 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40108 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:17,588 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40108 - "GET /api/entry_points?running=true HTTP/1.1" 200
galaxy.tools INFO 2024-02-23 14:38:19,507 [pN:main.1,p:78709,tN:WSGI_7] Validated and populated state for tool request (4.275 ms)
galaxy.tools.actions INFO 2024-02-23 14:38:19,523 [pN:main.1,p:78709,tN:WSGI_7] Handled output named output1 for tool CONVERTER_gz_to_uncompressed (1.515 ms)
galaxy.tools.actions INFO 2024-02-23 14:38:19,523 [pN:main.1,p:78709,tN:WSGI_7] Added output datasets to history (0.330 ms)
galaxy.tools.actions INFO 2024-02-23 14:38:19,525 [pN:main.1,p:78709,tN:WSGI_7] Setup for job Job[unflushed,tool_id=CONVERTER_gz_to_uncompressed] complete, ready to be enqueued (1.727 ms)
galaxy.tools.actions INFO 2024-02-23 14:38:19,553 [pN:main.1,p:78709,tN:WSGI_7] Flushed transaction for job Job[id=2,tool_id=CONVERTER_gz_to_uncompressed] (27.383 ms)
galaxy.web_stack.handlers INFO 2024-02-23 14:38:19,562 [pN:main.1,p:78709,tN:WSGI_7] Flushed transaction for Job[id=2,tool_id=CONVERTER_gz_to_uncompressed] (8.918 ms)
galaxy.web_stack.handlers INFO 2024-02-23 14:38:19,562 [pN:main.1,p:78709,tN:WSGI_7] (Job[id=2,tool_id=CONVERTER_gz_to_uncompressed]) Handler '_default_' assigned using 'HANDLER_ASSIGNMENT_METHODS.DB_SKIP_LOCKED' assignment method
galaxy.tools.actions INFO 2024-02-23 14:38:19,600 [pN:main.1,p:78709,tN:WSGI_7] Handled output named adaptor_report for tool ncbi_fcs_adaptor (4.755 ms)
galaxy.tools.actions INFO 2024-02-23 14:38:19,603 [pN:main.1,p:78709,tN:WSGI_7] Handled output named clean_fasta for tool ncbi_fcs_adaptor (2.600 ms)
galaxy.tools.actions INFO 2024-02-23 14:38:19,611 [pN:main.1,p:78709,tN:WSGI_7] Added output datasets to history (7.890 ms)
galaxy.tools.actions INFO 2024-02-23 14:38:19,612 [pN:main.1,p:78709,tN:WSGI_7] Setup for job Job[unflushed,tool_id=ncbi_fcs_adaptor] complete, ready to be enqueued (1.323 ms)
galaxy.tools.execute DEBUG 2024-02-23 14:38:19,613 [pN:main.1,p:78709,tN:WSGI_7] Tool ncbi_fcs_adaptor created job None (102.802 ms)
galaxy.web_stack.handlers INFO 2024-02-23 14:38:19,632 [pN:main.1,p:78709,tN:WSGI_7] (Job[id=3,tool_id=ncbi_fcs_adaptor]) Handler '_default_' assigned using 'HANDLER_ASSIGNMENT_METHODS.DB_SKIP_LOCKED' assignment method
galaxy.tools.execute DEBUG 2024-02-23 14:38:19,636 [pN:main.1,p:78709,tN:WSGI_7] Created 1 job(s) for tool ncbi_fcs_adaptor request (128.259 ms)
uvicorn.access INFO 2024-02-23 14:38:19,648 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40108 - "POST /api/tools HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:19,678 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40108 - "GET /history/current_history_json?since=2024-02-23T19:31:05.000216 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:19,732 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40108 - "GET /api/histories/e94ef2b25ec88be9/contents?v=dev&limit=1000&q=update_time-ge&qv=2024-02-23T19:31:05.566Z HTTP/1.1" 200
galaxy.jobs.mapper DEBUG 2024-02-23 14:38:19,766 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] (2) Mapped job to destination id: docker_local
galaxy.jobs.handler DEBUG 2024-02-23 14:38:19,773 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] (2) Dispatching to local runner
galaxy.jobs DEBUG 2024-02-23 14:38:19,800 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] (2) Persisting job destination (destination id: docker_local)
uvicorn.access INFO 2024-02-23 14:38:19,828 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40108 - "GET /api/users/e94ef2b25ec88be9 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:19,856 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40112 - "GET /api/histories/e94ef2b25ec88be9/contents?v=dev&order=hid&offset=0&limit=100&q=deleted&qv=false&q=visible&qv=true HTTP/1.1" 200
galaxy.jobs DEBUG 2024-02-23 14:38:19,858 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] (2) Working directory for job is: /tmp/tmpqrlh6ih1/job_working_directory/000/2
galaxy.jobs.runners DEBUG 2024-02-23 14:38:19,870 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] Job [2] queued (96.880 ms)
galaxy.jobs.handler INFO 2024-02-23 14:38:19,884 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] (2) Job dispatched
galaxy.jobs DEBUG 2024-02-23 14:38:19,938 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] Job wrapper for Job [2] prepared (47.790 ms)
galaxy.tool_util.deps.containers INFO 2024-02-23 14:38:19,939 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] Checking with container resolver [ExplicitContainerResolver[]] found description [None]
galaxy.tool_util.deps.container_resolvers.mulled DEBUG 2024-02-23 14:38:19,939 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] Image name for tool CONVERTER_gz_to_uncompressed: no targets
galaxy.tool_util.deps.containers INFO 2024-02-23 14:38:19,939 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] Checking with container resolver [CachedMulledDockerContainerResolver[namespace=biocontainers]] found description [None]
galaxy.tool_util.deps.container_resolvers.mulled DEBUG 2024-02-23 14:38:19,939 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] Image name for tool CONVERTER_gz_to_uncompressed: no targets
galaxy.tool_util.deps.containers INFO 2024-02-23 14:38:19,939 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] Checking with container resolver [CachedMulledDockerContainerResolver[namespace=local]] found description [None]
galaxy.tool_util.deps.container_resolvers.mulled DEBUG 2024-02-23 14:38:19,939 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] Image name for tool CONVERTER_gz_to_uncompressed: no targets
galaxy.tool_util.deps.containers INFO 2024-02-23 14:38:19,939 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] Checking with container resolver [MulledDockerContainerResolver[namespace=biocontainers]] found description [None]
galaxy.tool_util.deps.container_resolvers.mulled DEBUG 2024-02-23 14:38:19,939 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] Image name for tool CONVERTER_gz_to_uncompressed: no targets
galaxy.tool_util.deps.containers INFO 2024-02-23 14:38:19,939 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] Checking with container resolver [BuildDockerContainerResolver[namespace=local]] found description [None]
galaxy.jobs.command_factory INFO 2024-02-23 14:38:19,971 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] Built script [/tmp/tmpqrlh6ih1/job_working_directory/000/2/tool_script.sh] for tool command [cp '/tmp/tmpqrlh6ih1/job_working_directory/000/2/configs/tmputamy64b' 'galaxy.json' && gzip -dcf '/tmp/tmpqrlh6ih1/files/b/2/5/dataset_b25039b4-189c-4c5a-9380-009d996fbf23.dat' > '/tmp/tmpqrlh6ih1/job_working_directory/000/2/outputs/dataset_9eacd1c3-39c4-4284-879f-5d377c761f3e.dat']
galaxy.jobs.runners DEBUG 2024-02-23 14:38:20,010 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] (2) command is: mkdir -p working outputs configs
if [ -d _working ]; then
    rm -rf working/ outputs/ configs/; cp -R _working working; cp -R _outputs outputs; cp -R _configs configs
else
    cp -R working _working; cp -R outputs _outputs; cp -R configs _configs
fi
cd working; /bin/bash /tmp/tmpqrlh6ih1/job_working_directory/000/2/tool_script.sh > '../outputs/tool_stdout' 2> '../outputs/tool_stderr'; return_code=$?; echo $return_code > /tmp/tmpqrlh6ih1/job_working_directory/000/2/galaxy_2.ec; cd '/tmp/tmpqrlh6ih1/job_working_directory/000/2'; 
[ "$GALAXY_VIRTUAL_ENV" = "None" ] && GALAXY_VIRTUAL_ENV="$_GALAXY_VIRTUAL_ENV"; _galaxy_setup_environment True; python metadata/set.py; sh -c "exit $return_code"
galaxy.jobs.runners.local DEBUG 2024-02-23 14:38:20,036 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] (2) executing job script: /tmp/tmpqrlh6ih1/job_working_directory/000/2/galaxy_2.sh
uvicorn.access INFO 2024-02-23 14:38:22,837 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40116 - "GET /history/current_history_json?since=2024-02-23T19:38:19.000622 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:22,871 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40116 - "GET /api/histories/e94ef2b25ec88be9/contents?v=dev&limit=1000&q=update_time-ge&qv=2024-02-23T19:38:19.686Z HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:22,921 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40116 - "GET /api/users/e94ef2b25ec88be9 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:22,946 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40118 - "GET /api/histories/e94ef2b25ec88be9/contents?v=dev&order=hid&offset=0&limit=100&q=deleted&qv=false&q=visible&qv=true HTTP/1.1" 200
galaxy.jobs.runners.util.process_groups DEBUG 2024-02-23 14:38:23,760 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] check_pg(): No process found in process group 79031
galaxy.jobs.runners.local DEBUG 2024-02-23 14:38:23,761 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] execution finished: /tmp/tmpqrlh6ih1/job_working_directory/000/2/galaxy_2.sh
galaxy.jobs DEBUG 2024-02-23 14:38:23,783 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] finish(): Moved /tmp/tmpqrlh6ih1/job_working_directory/000/2/outputs/dataset_9eacd1c3-39c4-4284-879f-5d377c761f3e.dat to /tmp/tmpqrlh6ih1/files/9/e/a/dataset_9eacd1c3-39c4-4284-879f-5d377c761f3e.dat
galaxy.tool_util.provided_metadata DEBUG 2024-02-23 14:38:23,790 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] unnamed outputs [{'output1': {'name': 'fcsadaptor_prok_test.fa uncompressed', 'ext': 'fasta'}}]
galaxy.model.metadata DEBUG 2024-02-23 14:38:23,795 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] loading metadata from file for: HistoryDatasetAssociation 2
galaxy.jobs DEBUG 2024-02-23 14:38:23,823 [pN:main.1,p:78709,tN:LocalRunner.work_thread-3] job_wrapper.finish for job 2 executed (45.391 ms)
galaxy.jobs.mapper DEBUG 2024-02-23 14:38:23,983 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] (3) Mapped job to destination id: docker_local
galaxy.jobs.handler DEBUG 2024-02-23 14:38:23,986 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] (3) Dispatching to local runner
galaxy.jobs DEBUG 2024-02-23 14:38:23,991 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] (3) Persisting job destination (destination id: docker_local)
galaxy.jobs DEBUG 2024-02-23 14:38:23,996 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] (3) Working directory for job is: /tmp/tmpqrlh6ih1/job_working_directory/000/3
galaxy.jobs.runners DEBUG 2024-02-23 14:38:24,002 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] Job [3] queued (15.947 ms)
galaxy.jobs.handler INFO 2024-02-23 14:38:24,010 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] (3) Job dispatched
galaxy.security.object_wrapper WARNING 2024-02-23 14:38:24,049 [pN:main.1,p:78709,tN:LocalRunner.work_thread-2] Unable to create dynamic subclass SafeStringWrapper__galaxy.model.none_like.None__NoneType__NotImplementedType__Number__SafeStringWrapper__ToolParameterValueWrapper__bool__bytearray__ellipsis for <class 'galaxy.model.none_like.NoneDataset'>, None: type() doesn't support MRO entry resolution; use types.new_class()
galaxy.jobs DEBUG 2024-02-23 14:38:24,062 [pN:main.1,p:78709,tN:LocalRunner.work_thread-2] Job wrapper for Job [3] prepared (43.024 ms)
galaxy.tool_util.deps.containers INFO 2024-02-23 14:38:24,062 [pN:main.1,p:78709,tN:LocalRunner.work_thread-2] Checking with container resolver [ExplicitContainerResolver[]] found description [ContainerDescription[identifier=ncbi/fcs-adaptor:0.5.0,type=docker]]
galaxy.jobs.command_factory INFO 2024-02-23 14:38:24,104 [pN:main.1,p:78709,tN:LocalRunner.work_thread-2] Built script [/tmp/tmpqrlh6ih1/job_working_directory/000/3/tool_script.sh] for tool command [/app/fcs/bin/av_screen_x -o "$(pwd)" '--prok' '/tmp/tmpqrlh6ih1/files/9/e/a/dataset_9eacd1c3-39c4-4284-879f-5d377c761f3e.dat']
galaxy.jobs.runners DEBUG 2024-02-23 14:38:24,149 [pN:main.1,p:78709,tN:LocalRunner.work_thread-2] (3) command is: mkdir -p working outputs configs
if [ -d _working ]; then
    rm -rf working/ outputs/ configs/; cp -R _working working; cp -R _outputs outputs; cp -R _configs configs
else
    cp -R working _working; cp -R outputs _outputs; cp -R configs _configs
fi
cd working; 
_on_exit() {
  docker kill ddbfcc5b6a8b487cbddefc4091d43dcb &> /dev/null
}
trap _on_exit EXIT
docker inspect ncbi/fcs-adaptor:0.5.0 > /dev/null 2>&1
[ $? -ne 0 ] && docker pull ncbi/fcs-adaptor:0.5.0 > /dev/null 2>&1

docker run -e "GALAXY_SLOTS=$GALAXY_SLOTS" -e "GALAXY_MEMORY_MB=$GALAXY_MEMORY_MB" -e "GALAXY_MEMORY_MB_PER_SLOT=$GALAXY_MEMORY_MB_PER_SLOT" -e "HOME=$HOME" -e "_GALAXY_JOB_HOME_DIR=$_GALAXY_JOB_HOME_DIR" -e "_GALAXY_JOB_TMP_DIR=$_GALAXY_JOB_TMP_DIR" -e "TMPDIR=$TMPDIR" -e "TMP=$TMP" -e "TEMP=$TEMP" --name ddbfcc5b6a8b487cbddefc4091d43dcb -v "$_GALAXY_JOB_TMP_DIR:$_GALAXY_JOB_TMP_DIR:rw" -v "$TMPDIR:$TMPDIR:rw" -v "$TMP:$TMP:rw" -v "$TEMP:$TEMP:rw" -v /scratch/rico/galaxy:/scratch/rico/galaxy:ro -v /scratch/rico/galaxytools/tools/ncbi_fcs_adaptor:/scratch/rico/galaxytools/tools/ncbi_fcs_adaptor:ro -v /tmp/tmpqrlh6ih1/job_working_directory/000/3:/tmp/tmpqrlh6ih1/job_working_directory/000/3:ro -v /tmp/tmpqrlh6ih1/job_working_directory/000/3/outputs:/tmp/tmpqrlh6ih1/job_working_directory/000/3/outputs:rw -v "$_GALAXY_JOB_HOME_DIR:$_GALAXY_JOB_HOME_DIR:rw" -v /tmp/tmpqrlh6ih1/job_working_directory/000/3/working:/tmp/tmpqrlh6ih1/job_working_directory/000/3/working:rw -v /tmp/tmpqrlh6ih1/files:/tmp/tmpqrlh6ih1/files:ro -v /scratch/rico/galaxy/tool-data:/scratch/rico/galaxy/tool-data:ro --cpus ${GALAXY_SLOTS:-1} -w /tmp/tmpqrlh6ih1/job_working_directory/000/3/working --rm --user 1028:1028 ncbi/fcs-adaptor:0.5.0 /bin/sh /tmp/tmpqrlh6ih1/job_working_directory/000/3/tool_script.sh > '../outputs/tool_stdout' 2> '../outputs/tool_stderr'; return_code=$?; echo $return_code > /tmp/tmpqrlh6ih1/job_working_directory/000/3/galaxy_3.ec; 
if [ -f "/tmp/tmpqrlh6ih1/job_working_directory/000/3/working/fcs_adaptor_report.txt" ] ; then cp "/tmp/tmpqrlh6ih1/job_working_directory/000/3/working/fcs_adaptor_report.txt" "/tmp/tmpqrlh6ih1/job_working_directory/000/3/outputs/dataset_baab9cb3-daf7-4634-b244-35ef4dfc423e.dat" ; fi; 
if [ -f "/tmp/tmpqrlh6ih1/job_working_directory/000/3/working/cleaned_sequences/"*".dat" ] ; then cp "/tmp/tmpqrlh6ih1/job_working_directory/000/3/working/cleaned_sequences/"*".dat" "/tmp/tmpqrlh6ih1/job_working_directory/000/3/outputs/dataset_6151fe42-edab-4c01-b97a-3428cd1f28b4.dat" ; fi; cd '/tmp/tmpqrlh6ih1/job_working_directory/000/3'; 
[ "$GALAXY_VIRTUAL_ENV" = "None" ] && GALAXY_VIRTUAL_ENV="$_GALAXY_VIRTUAL_ENV"; _galaxy_setup_environment True; python metadata/set.py; sh -c "exit $return_code"
galaxy.jobs.runners.local DEBUG 2024-02-23 14:38:24,173 [pN:main.1,p:78709,tN:LocalRunner.work_thread-2] (3) executing job script: /tmp/tmpqrlh6ih1/job_working_directory/000/3/galaxy_3.sh
uvicorn.access INFO 2024-02-23 14:38:25,943 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33910 - "GET /history/current_history_json?since=2024-02-23T19:38:20.000081 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:26,002 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33910 - "GET /api/histories/e94ef2b25ec88be9/contents?v=dev&limit=1000&q=update_time-ge&qv=2024-02-23T19:38:22.844Z HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:26,102 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33910 - "GET /api/users/e94ef2b25ec88be9 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:26,133 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33920 - "GET /api/histories/e94ef2b25ec88be9/contents?v=dev&order=hid&offset=0&limit=100&q=deleted&qv=false&q=visible&qv=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:27,588 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33920 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:29,108 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33922 - "GET /history/current_history_json?since=2024-02-23T19:38:24.000221 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:29,128 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33920 - "GET /api/datasets/b35bb5a57277f2b7?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:30,842 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33920 - "GET /api/jobs/b35bb5a57277f2b7/build_for_rerun HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:30,927 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33920 - "POST /api/tools/ncbi_fcs_adaptor/build HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:32,135 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33920 - "GET /history/current_history_json?since=2024-02-23T19:38:24.000221 HTTP/1.1" 200
galaxy.tools INFO 2024-02-23 14:38:34,946 [pN:main.1,p:78709,tN:WSGI_8] Validated and populated state for tool request (4.404 ms)
galaxy.tools.actions INFO 2024-02-23 14:38:34,953 [pN:main.1,p:78709,tN:WSGI_8] Handled output named adaptor_report for tool ncbi_fcs_adaptor (0.981 ms)
galaxy.tools.actions INFO 2024-02-23 14:38:34,953 [pN:main.1,p:78709,tN:WSGI_8] Handled output named clean_fasta for tool ncbi_fcs_adaptor (0.660 ms)
galaxy.tools.actions DEBUG 2024-02-23 14:38:34,953 [pN:main.1,p:78709,tN:WSGI_8] Tool ncbi_fcs_adaptor output adaptor_log: dataset output filter (advanced['optional_log'] is not None and 'adaptor_log' in advanced['optional_log'].split(',')) failed: 'list' object has no attribute 'split'
galaxy.tools.actions INFO 2024-02-23 14:38:34,956 [pN:main.1,p:78709,tN:WSGI_8] Handled output named adaptor_log for tool ncbi_fcs_adaptor (2.348 ms)
galaxy.tools.actions DEBUG 2024-02-23 14:38:34,956 [pN:main.1,p:78709,tN:WSGI_8] Tool ncbi_fcs_adaptor output validate_fasta_log: dataset output filter (advanced['optional_log'] is not None and 'validate_fasta_log' in advanced['optional_log'].split(',')) failed: 'list' object has no attribute 'split'
galaxy.tools.actions INFO 2024-02-23 14:38:34,958 [pN:main.1,p:78709,tN:WSGI_8] Handled output named validate_fasta_log for tool ncbi_fcs_adaptor (2.229 ms)
galaxy.tools.actions INFO 2024-02-23 14:38:34,966 [pN:main.1,p:78709,tN:WSGI_8] Added output datasets to history (7.143 ms)
galaxy.tools.actions INFO 2024-02-23 14:38:34,968 [pN:main.1,p:78709,tN:WSGI_8] Setup for job Job[unflushed,tool_id=ncbi_fcs_adaptor] complete, ready to be enqueued (1.981 ms)
galaxy.tools.execute DEBUG 2024-02-23 14:38:34,968 [pN:main.1,p:78709,tN:WSGI_8] Tool ncbi_fcs_adaptor created job None (19.954 ms)
galaxy.web_stack.handlers INFO 2024-02-23 14:38:34,988 [pN:main.1,p:78709,tN:WSGI_8] (Job[id=4,tool_id=ncbi_fcs_adaptor]) Handler '_default_' assigned using 'HANDLER_ASSIGNMENT_METHODS.DB_SKIP_LOCKED' assignment method
galaxy.tools.execute DEBUG 2024-02-23 14:38:34,991 [pN:main.1,p:78709,tN:WSGI_8] Created 1 job(s) for tool ncbi_fcs_adaptor request (45.036 ms)
uvicorn.access INFO 2024-02-23 14:38:35,007 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33928 - "POST /api/tools HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:35,036 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33928 - "GET /history/current_history_json?since=2024-02-23T19:38:24.000221 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:35,092 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33928 - "GET /api/histories/e94ef2b25ec88be9/contents?v=dev&limit=1000&q=update_time-ge&qv=2024-02-23T19:38:25.956Z&details=b35bb5a57277f2b7 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:35,135 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33928 - "GET /api/users/e94ef2b25ec88be9 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:35,156 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33940 - "GET /api/histories/e94ef2b25ec88be9/contents?v=dev&order=hid&offset=0&limit=100&q=deleted&qv=false&q=visible&qv=true HTTP/1.1" 200
galaxy.jobs.mapper DEBUG 2024-02-23 14:38:35,297 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] (4) Mapped job to destination id: docker_local
galaxy.jobs.handler DEBUG 2024-02-23 14:38:35,300 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] (4) Dispatching to local runner
galaxy.jobs DEBUG 2024-02-23 14:38:35,305 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] (4) Persisting job destination (destination id: docker_local)
galaxy.jobs DEBUG 2024-02-23 14:38:35,310 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] (4) Working directory for job is: /tmp/tmpqrlh6ih1/job_working_directory/000/4
galaxy.jobs.runners DEBUG 2024-02-23 14:38:35,316 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] Job [4] queued (15.787 ms)
galaxy.jobs.handler INFO 2024-02-23 14:38:35,323 [pN:main.1,p:78709,tN:JobHandlerQueue.monitor_thread] (4) Job dispatched
galaxy.jobs DEBUG 2024-02-23 14:38:35,369 [pN:main.1,p:78709,tN:LocalRunner.work_thread-0] Job wrapper for Job [4] prepared (36.045 ms)
galaxy.tool_util.deps.containers INFO 2024-02-23 14:38:35,369 [pN:main.1,p:78709,tN:LocalRunner.work_thread-0] Checking with container resolver [ExplicitContainerResolver[]] found description [ContainerDescription[identifier=ncbi/fcs-adaptor:0.5.0,type=docker]]
galaxy.jobs.command_factory INFO 2024-02-23 14:38:35,400 [pN:main.1,p:78709,tN:LocalRunner.work_thread-0] Built script [/tmp/tmpqrlh6ih1/job_working_directory/000/4/tool_script.sh] for tool command [/app/fcs/bin/av_screen_x -o "$(pwd)" '--prok' '/tmp/tmpqrlh6ih1/files/9/e/a/dataset_9eacd1c3-39c4-4284-879f-5d377c761f3e.dat']
galaxy.jobs.runners DEBUG 2024-02-23 14:38:35,453 [pN:main.1,p:78709,tN:LocalRunner.work_thread-0] (4) command is: mkdir -p working outputs configs
if [ -d _working ]; then
    rm -rf working/ outputs/ configs/; cp -R _working working; cp -R _outputs outputs; cp -R _configs configs
else
    cp -R working _working; cp -R outputs _outputs; cp -R configs _configs
fi
cd working; 
_on_exit() {
  docker kill 0ed49ce4b7a6495fb6c27a5f2b8c6565 &> /dev/null
}
trap _on_exit EXIT
docker inspect ncbi/fcs-adaptor:0.5.0 > /dev/null 2>&1
[ $? -ne 0 ] && docker pull ncbi/fcs-adaptor:0.5.0 > /dev/null 2>&1

docker run -e "GALAXY_SLOTS=$GALAXY_SLOTS" -e "GALAXY_MEMORY_MB=$GALAXY_MEMORY_MB" -e "GALAXY_MEMORY_MB_PER_SLOT=$GALAXY_MEMORY_MB_PER_SLOT" -e "HOME=$HOME" -e "_GALAXY_JOB_HOME_DIR=$_GALAXY_JOB_HOME_DIR" -e "_GALAXY_JOB_TMP_DIR=$_GALAXY_JOB_TMP_DIR" -e "TMPDIR=$TMPDIR" -e "TMP=$TMP" -e "TEMP=$TEMP" --name 0ed49ce4b7a6495fb6c27a5f2b8c6565 -v "$_GALAXY_JOB_TMP_DIR:$_GALAXY_JOB_TMP_DIR:rw" -v "$TMPDIR:$TMPDIR:rw" -v "$TMP:$TMP:rw" -v "$TEMP:$TEMP:rw" -v /scratch/rico/galaxy:/scratch/rico/galaxy:ro -v /scratch/rico/galaxytools/tools/ncbi_fcs_adaptor:/scratch/rico/galaxytools/tools/ncbi_fcs_adaptor:ro -v /tmp/tmpqrlh6ih1/job_working_directory/000/4:/tmp/tmpqrlh6ih1/job_working_directory/000/4:ro -v /tmp/tmpqrlh6ih1/job_working_directory/000/4/outputs:/tmp/tmpqrlh6ih1/job_working_directory/000/4/outputs:rw -v "$_GALAXY_JOB_HOME_DIR:$_GALAXY_JOB_HOME_DIR:rw" -v /tmp/tmpqrlh6ih1/job_working_directory/000/4/working:/tmp/tmpqrlh6ih1/job_working_directory/000/4/working:rw -v /tmp/tmpqrlh6ih1/files:/tmp/tmpqrlh6ih1/files:ro -v /scratch/rico/galaxy/tool-data:/scratch/rico/galaxy/tool-data:ro --cpus ${GALAXY_SLOTS:-1} -w /tmp/tmpqrlh6ih1/job_working_directory/000/4/working --rm --user 1028:1028 ncbi/fcs-adaptor:0.5.0 /bin/sh /tmp/tmpqrlh6ih1/job_working_directory/000/4/tool_script.sh > '../outputs/tool_stdout' 2> '../outputs/tool_stderr'; return_code=$?; echo $return_code > /tmp/tmpqrlh6ih1/job_working_directory/000/4/galaxy_4.ec; 
if [ -f "/tmp/tmpqrlh6ih1/job_working_directory/000/4/working/fcs_adaptor_report.txt" ] ; then cp "/tmp/tmpqrlh6ih1/job_working_directory/000/4/working/fcs_adaptor_report.txt" "/tmp/tmpqrlh6ih1/job_working_directory/000/4/outputs/dataset_41844168-8b86-45ce-a8b8-c8552139307c.dat" ; fi; 
if [ -f "/tmp/tmpqrlh6ih1/job_working_directory/000/4/working/cleaned_sequences/"*".dat" ] ; then cp "/tmp/tmpqrlh6ih1/job_working_directory/000/4/working/cleaned_sequences/"*".dat" "/tmp/tmpqrlh6ih1/job_working_directory/000/4/outputs/dataset_41da1090-710e-4c25-9a3d-97472671c387.dat" ; fi; 
if [ -f "/tmp/tmpqrlh6ih1/job_working_directory/000/4/working/fcs_adaptor.log" ] ; then cp "/tmp/tmpqrlh6ih1/job_working_directory/000/4/working/fcs_adaptor.log" "/tmp/tmpqrlh6ih1/job_working_directory/000/4/outputs/dataset_5c65272e-4fbd-4386-af7d-d8cbdd90242a.dat" ; fi; 
if [ -f "/tmp/tmpqrlh6ih1/job_working_directory/000/4/working/validate_fasta.txt" ] ; then cp "/tmp/tmpqrlh6ih1/job_working_directory/000/4/working/validate_fasta.txt" "/tmp/tmpqrlh6ih1/job_working_directory/000/4/outputs/dataset_92e5dc26-302e-4dbd-bd15-8050babfdff4.dat" ; fi; cd '/tmp/tmpqrlh6ih1/job_working_directory/000/4'; 
[ "$GALAXY_VIRTUAL_ENV" = "None" ] && GALAXY_VIRTUAL_ENV="$_GALAXY_VIRTUAL_ENV"; _galaxy_setup_environment True; python metadata/set.py; sh -c "exit $return_code"
galaxy.jobs.runners.local DEBUG 2024-02-23 14:38:35,474 [pN:main.1,p:78709,tN:LocalRunner.work_thread-0] (4) executing job script: /tmp/tmpqrlh6ih1/job_working_directory/000/4/galaxy_4.sh
uvicorn.access INFO 2024-02-23 14:38:37,597 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40730 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:38,198 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40730 - "GET /history/current_history_json?since=2024-02-23T19:38:34.000978 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:38,234 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40730 - "GET /api/histories/e94ef2b25ec88be9/contents?v=dev&limit=1000&q=update_time-ge&qv=2024-02-23T19:38:35.061Z&details=b35bb5a57277f2b7 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:38,279 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40730 - "GET /api/users/e94ef2b25ec88be9 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:38,301 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40740 - "GET /api/histories/e94ef2b25ec88be9/contents?v=dev&order=hid&offset=0&limit=100&q=deleted&qv=false&q=visible&qv=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:41,295 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40750 - "GET /history/current_history_json?since=2024-02-23T19:38:35.000518 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:44,323 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40762 - "GET /history/current_history_json?since=2024-02-23T19:38:35.000518 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:47,347 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:47208 - "GET /history/current_history_json?since=2024-02-23T19:38:35.000518 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:47,597 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:47208 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:50,375 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:47224 - "GET /history/current_history_json?since=2024-02-23T19:38:35.000518 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:53,406 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:47236 - "GET /history/current_history_json?since=2024-02-23T19:38:35.000518 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:56,435 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:55260 - "GET /history/current_history_json?since=2024-02-23T19:38:35.000518 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:57,596 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:55260 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:38:59,466 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:55260 - "GET /history/current_history_json?since=2024-02-23T19:38:35.000518 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:02,494 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:55264 - "GET /history/current_history_json?since=2024-02-23T19:38:35.000518 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:05,526 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:55266 - "GET /history/current_history_json?since=2024-02-23T19:38:35.000518 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:07,597 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:37544 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:08,555 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:37544 - "GET /history/current_history_json?since=2024-02-23T19:38:35.000518 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:11,592 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:37560 - "GET /history/current_history_json?since=2024-02-23T19:38:35.000518 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:14,624 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:37564 - "GET /history/current_history_json?since=2024-02-23T19:38:35.000518 HTTP/1.1" 200
galaxy.jobs.runners.util.process_groups DEBUG 2024-02-23 14:39:15,076 [pN:main.1,p:78709,tN:LocalRunner.work_thread-2] check_pg(): No process found in process group 79120
galaxy.jobs.runners.local DEBUG 2024-02-23 14:39:15,077 [pN:main.1,p:78709,tN:LocalRunner.work_thread-2] execution finished: /tmp/tmpqrlh6ih1/job_working_directory/000/3/galaxy_3.sh
galaxy.jobs DEBUG 2024-02-23 14:39:15,102 [pN:main.1,p:78709,tN:LocalRunner.work_thread-2] finish(): Moved /tmp/tmpqrlh6ih1/job_working_directory/000/3/outputs/dataset_baab9cb3-daf7-4634-b244-35ef4dfc423e.dat to /tmp/tmpqrlh6ih1/files/b/a/a/dataset_baab9cb3-daf7-4634-b244-35ef4dfc423e.dat
galaxy.jobs DEBUG 2024-02-23 14:39:15,102 [pN:main.1,p:78709,tN:LocalRunner.work_thread-2] finish(): Moved /tmp/tmpqrlh6ih1/job_working_directory/000/3/outputs/dataset_6151fe42-edab-4c01-b97a-3428cd1f28b4.dat to /tmp/tmpqrlh6ih1/files/6/1/5/dataset_6151fe42-edab-4c01-b97a-3428cd1f28b4.dat
galaxy.model.metadata DEBUG 2024-02-23 14:39:15,113 [pN:main.1,p:78709,tN:LocalRunner.work_thread-2] loading metadata from file for: HistoryDatasetAssociation 3
galaxy.model.metadata DEBUG 2024-02-23 14:39:15,119 [pN:main.1,p:78709,tN:LocalRunner.work_thread-2] loading metadata from file for: HistoryDatasetAssociation 4
galaxy.jobs DEBUG 2024-02-23 14:39:15,151 [pN:main.1,p:78709,tN:LocalRunner.work_thread-2] job_wrapper.finish for job 3 executed (54.675 ms)
uvicorn.access INFO 2024-02-23 14:39:17,599 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46768 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:17,658 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46768 - "GET /history/current_history_json?since=2024-02-23T19:38:35.000518 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:17,696 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46768 - "GET /api/histories/e94ef2b25ec88be9/contents?v=dev&limit=1000&q=update_time-ge&qv=2024-02-23T19:38:38.206Z HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:17,760 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46768 - "GET /api/users/e94ef2b25ec88be9 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:17,793 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46772 - "GET /api/histories/e94ef2b25ec88be9/contents?v=dev&order=hid&offset=0&limit=100&q=deleted&qv=false&q=visible&qv=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:20,763 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46780 - "GET /history/current_history_json?since=2024-02-23T19:39:15.000128 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:22,402 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46780 - "GET /api/datasets/b35bb5a57277f2b7?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:23,795 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46780 - "GET /history/current_history_json?since=2024-02-23T19:39:15.000128 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:26,829 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58672 - "GET /history/current_history_json?since=2024-02-23T19:39:15.000128 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:27,597 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58672 - "GET /api/entry_points?running=true HTTP/1.1" 200
galaxy.jobs.runners.util.process_groups DEBUG 2024-02-23 14:39:28,194 [pN:main.1,p:78709,tN:LocalRunner.work_thread-0] check_pg(): No process found in process group 79227
galaxy.jobs.runners.local DEBUG 2024-02-23 14:39:28,195 [pN:main.1,p:78709,tN:LocalRunner.work_thread-0] execution finished: /tmp/tmpqrlh6ih1/job_working_directory/000/4/galaxy_4.sh
galaxy.jobs DEBUG 2024-02-23 14:39:28,221 [pN:main.1,p:78709,tN:LocalRunner.work_thread-0] finish(): Moved /tmp/tmpqrlh6ih1/job_working_directory/000/4/outputs/dataset_41844168-8b86-45ce-a8b8-c8552139307c.dat to /tmp/tmpqrlh6ih1/files/4/1/8/dataset_41844168-8b86-45ce-a8b8-c8552139307c.dat
galaxy.jobs DEBUG 2024-02-23 14:39:28,221 [pN:main.1,p:78709,tN:LocalRunner.work_thread-0] finish(): Moved /tmp/tmpqrlh6ih1/job_working_directory/000/4/outputs/dataset_41da1090-710e-4c25-9a3d-97472671c387.dat to /tmp/tmpqrlh6ih1/files/4/1/d/dataset_41da1090-710e-4c25-9a3d-97472671c387.dat
galaxy.jobs DEBUG 2024-02-23 14:39:28,221 [pN:main.1,p:78709,tN:LocalRunner.work_thread-0] finish(): Moved /tmp/tmpqrlh6ih1/job_working_directory/000/4/outputs/dataset_5c65272e-4fbd-4386-af7d-d8cbdd90242a.dat to /tmp/tmpqrlh6ih1/files/5/c/6/dataset_5c65272e-4fbd-4386-af7d-d8cbdd90242a.dat
galaxy.jobs DEBUG 2024-02-23 14:39:28,221 [pN:main.1,p:78709,tN:LocalRunner.work_thread-0] finish(): Moved /tmp/tmpqrlh6ih1/job_working_directory/000/4/outputs/dataset_92e5dc26-302e-4dbd-bd15-8050babfdff4.dat to /tmp/tmpqrlh6ih1/files/9/2/e/dataset_92e5dc26-302e-4dbd-bd15-8050babfdff4.dat
galaxy.model.metadata DEBUG 2024-02-23 14:39:28,232 [pN:main.1,p:78709,tN:LocalRunner.work_thread-0] loading metadata from file for: HistoryDatasetAssociation 5
galaxy.model.metadata DEBUG 2024-02-23 14:39:28,236 [pN:main.1,p:78709,tN:LocalRunner.work_thread-0] loading metadata from file for: HistoryDatasetAssociation 6
galaxy.model.metadata DEBUG 2024-02-23 14:39:28,239 [pN:main.1,p:78709,tN:LocalRunner.work_thread-0] loading metadata from file for: HistoryDatasetAssociation 7
galaxy.model.metadata DEBUG 2024-02-23 14:39:28,263 [pN:main.1,p:78709,tN:LocalRunner.work_thread-0] loading metadata from file for: HistoryDatasetAssociation 8
galaxy.jobs DEBUG 2024-02-23 14:39:28,325 [pN:main.1,p:78709,tN:LocalRunner.work_thread-0] job_wrapper.finish for job 4 executed (110.502 ms)
uvicorn.access INFO 2024-02-23 14:39:29,867 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58686 - "GET /history/current_history_json?since=2024-02-23T19:39:15.000128 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:29,913 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58686 - "GET /api/histories/e94ef2b25ec88be9/contents?v=dev&limit=1000&q=update_time-ge&qv=2024-02-23T19:39:17.665Z&details=b35bb5a57277f2b7 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:29,971 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58686 - "GET /api/users/e94ef2b25ec88be9 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:29,997 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58700 - "GET /api/histories/e94ef2b25ec88be9/contents?v=dev&order=hid&offset=0&limit=100&q=deleted&qv=false&q=visible&qv=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:31,162 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58700 - "GET /datasets/b35bb5a57277f2b7/display/?preview=True HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:31,188 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58700 - "GET /static/dist/generic.bundled.js?v=1707855697000 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:32,982 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58700 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:36,015 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:44964 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:37,599 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:44964 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:39,044 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:44964 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:41,064 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:44964 - "GET /datasets/d6674a497e11acb0/display/?preview=True HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:42,071 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:44964 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:45,103 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:44972 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:47,604 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45866 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:48,131 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45866 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:51,163 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45876 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:53,838 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45888 - "GET /api/datasets/b35bb5a57277f2b7?view=detailed HTTP/1.1" 200
/scratch/rico/galaxy/lib/galaxy/model/__init__.py:494: SAWarning: Dialect sqlite+pysqlite does *not* support Decimal objects natively, and SQLAlchemy must convert from floating point - rounding errors and other issues may occur. Please consider storing Decimal numbers as strings or integers on this platform for lossless storage.
  return self.text_metrics + self.numeric_metrics
uvicorn.access INFO 2024-02-23 14:39:53,877 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45888 - "GET /api/jobs/b35bb5a57277f2b7?full=True HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:54,036 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45902 - "GET /api/datasets/b35bb5a57277f2b7/storage HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:54,048 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45912 - "GET /api/datasets/b35bb5a57277f2b7/inheritance_chain HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:54,095 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45940 - "GET /api/jobs/b35bb5a57277f2b7/destination_params HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:54,110 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45924 - "GET /api/datasets/b35bb5a57277f2b7/metrics?hda_ldda=hda HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:54,133 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45888 - "GET /api/datasets/b35bb5a57277f2b7/parameters_display?hda_ldda=hda HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:54,188 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45912 - "GET /api/users/current/usage/__null__ HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:54,204 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45952 - "GET /api/datasets/b35bb5a57277f2b7?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:54,229 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45940 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:54,268 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45902 - "GET /api/jobs/b35bb5a57277f2b7?full=True HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:54,315 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45888 - "GET /api/datasets/a8266ce1f5b52ae6?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:54,324 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45912 - "GET /api/configuration/decode/b35bb5a57277f2b7 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:54,351 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45940 - "GET /api/configuration/decode/e94ef2b25ec88be9 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:54,358 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45924 - "GET /api/datasets/d6674a497e11acb0?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:54,378 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45952 - "GET /api/datasets/b35bb5a57277f2b7?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:54,381 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45912 - "GET /api/configuration/decode/b35bb5a57277f2b7 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:57,260 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57798 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:39:57,600 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57798 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:00,295 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57804 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:03,324 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57812 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:06,356 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57264 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:07,601 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57264 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:09,387 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57264 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:10,214 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57264 - "GET /api/datasets/d6674a497e11acb0?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:11,651 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57264 - "GET /api/datasets/d6674a497e11acb0?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:11,722 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57264 - "GET /api/jobs/b35bb5a57277f2b7?full=True HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:11,808 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57286 - "GET /api/datasets/d6674a497e11acb0?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:11,849 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57276 - "GET /api/datasets/d6674a497e11acb0/inheritance_chain HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:11,873 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57268 - "GET /api/datasets/d6674a497e11acb0/storage HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:11,906 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57302 - "GET /api/jobs/b35bb5a57277f2b7?full=True HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:11,921 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57284 - "GET /api/datasets/d6674a497e11acb0/metrics?hda_ldda=hda HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:11,930 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57286 - "GET /api/configuration/decode/d6674a497e11acb0 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:11,934 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57264 - "GET /api/datasets/d6674a497e11acb0/parameters_display?hda_ldda=hda HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:11,949 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57276 - "GET /api/configuration/decode/e94ef2b25ec88be9 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:11,985 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57268 - "GET /api/users/current/usage/__null__ HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:11,986 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57302 - "GET /api/configuration/decode/b35bb5a57277f2b7 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:12,024 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57284 - "GET /api/datasets/d6674a497e11acb0?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:12,056 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57286 - "GET /api/datasets/b35bb5a57277f2b7?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:12,068 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57264 - "GET /api/datasets/a8266ce1f5b52ae6?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:12,415 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57264 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:15,446 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57310 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:17,604 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:32830 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:18,476 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:32830 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:21,506 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:32842 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:24,543 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:32854 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:27,578 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53704 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:27,607 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53704 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:30,608 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53716 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:31,252 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53716 - "GET /api/tools/ncbi_fcs_adaptor/build?version=latest&tool_version=latest HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:31,362 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53716 - "POST /api/tools/ncbi_fcs_adaptor/build HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:33,640 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53728 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:36,669 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59536 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:37,609 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59536 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:37,724 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59536 - "POST /api/tools/ncbi_fcs_adaptor/build HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:39,699 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59536 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:42,730 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59542 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:45,762 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59192 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:47,611 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59192 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:48,791 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59192 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:51,823 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59208 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:54,824 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59214 - "GET /datasets/4aa1fa05efd4b363/display/?preview=True HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:54,850 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59214 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:57,213 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49028 - "GET /datasets/9d64888131bc67e9/display/?preview=True HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:57,732 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49028 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:40:57,924 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49028 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:00,329 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49040 - "GET /datasets/e331579530f91b88/display/?preview=True HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:00,952 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49040 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:03,981 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49054 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:05,964 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49054 - "GET /api/datasets/9a32e5e3a6abd4e7?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:07,016 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49054 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:07,728 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49054 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:08,614 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49054 - "GET /datasets/9a32e5e3a6abd4e7/display/?preview=True HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:10,059 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49054 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:11,938 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49054 - "GET /api/datasets/9a32e5e3a6abd4e7?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:11,976 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49054 - "GET /api/jobs/d6674a497e11acb0?full=True HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:12,059 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49054 - "GET /api/datasets/9a32e5e3a6abd4e7/parameters_display?hda_ldda=hda HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:12,119 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59504 - "GET /api/datasets/9a32e5e3a6abd4e7/metrics?hda_ldda=hda HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:12,132 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59496 - "GET /api/datasets/9a32e5e3a6abd4e7/inheritance_chain HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:12,146 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59492 - "GET /api/datasets/9a32e5e3a6abd4e7/storage HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:12,166 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59514 - "GET /api/jobs/d6674a497e11acb0/destination_params HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:12,244 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59516 - "GET /api/datasets/9a32e5e3a6abd4e7?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:12,269 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49054 - "GET /api/jobs/d6674a497e11acb0?full=True HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:12,363 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59504 - "GET /api/datasets/a8266ce1f5b52ae6?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:12,389 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59516 - "GET /api/users/current/usage/__null__ HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:12,401 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59496 - "GET /api/datasets/4aa1fa05efd4b363?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:12,418 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59514 - "GET /api/datasets/e331579530f91b88?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:12,419 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59492 - "GET /api/datasets/9d64888131bc67e9?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:12,465 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49054 - "GET /api/datasets/9a32e5e3a6abd4e7?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:12,474 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59504 - "GET /api/configuration/decode/9a32e5e3a6abd4e7 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:12,483 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59516 - "GET /api/configuration/decode/e94ef2b25ec88be9 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:12,486 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59496 - "GET /api/configuration/decode/d6674a497e11acb0 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:13,090 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59496 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:16,123 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53300 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:17,732 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53300 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:19,153 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53300 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:19,907 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53300 - "GET /datasets/9a32e5e3a6abd4e7/display/?preview=True HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:22,005 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53304 - "GET /api/datasets/9a32e5e3a6abd4e7?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:22,037 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53304 - "GET /api/jobs/d6674a497e11acb0?full=True HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:22,141 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53304 - "GET /api/datasets/9a32e5e3a6abd4e7/parameters_display?hda_ldda=hda HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:22,162 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53318 - "GET /api/datasets/9a32e5e3a6abd4e7/inheritance_chain HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:22,168 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53306 - "GET /api/datasets/9a32e5e3a6abd4e7/storage HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:22,200 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53332 - "GET /api/jobs/d6674a497e11acb0?full=True HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:22,233 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53324 - "GET /api/datasets/9a32e5e3a6abd4e7?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:22,250 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53332 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:22,324 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53306 - "GET /api/datasets/e331579530f91b88?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:22,358 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53324 - "GET /api/users/current/usage/__null__ HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:22,377 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53332 - "GET /api/configuration/decode/d6674a497e11acb0 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:22,397 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53348 - "GET /api/datasets/4aa1fa05efd4b363?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:22,410 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53318 - "GET /api/datasets/9d64888131bc67e9?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:22,424 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53304 - "GET /api/datasets/a8266ce1f5b52ae6?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:22,456 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53332 - "GET /api/configuration/decode/e94ef2b25ec88be9 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:22,462 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53324 - "GET /api/configuration/decode/9a32e5e3a6abd4e7 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:22,468 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53306 - "GET /api/datasets/9a32e5e3a6abd4e7?view=detailed HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:25,288 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53356 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:27,733 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58944 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:28,315 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58944 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:32,216 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58948 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200

==> /tmp/tmpqrlh6ih1/gravity/log/celery-beat.log <==
[2024-02-23 14:41:34,178: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-02-23 14:41:34,179: INFO/MainProcess] Scheduler: Sending due task clean-object-store-caches (galaxy.clean_object_store_caches)
[2024-02-23 14:41:34,195: DEBUG/MainProcess] galaxy.clean_object_store_caches sent. id->f5e83b64-c60a-4621-bc5d-a6516ea91ec9
[2024-02-23 14:41:34,196: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /tmp/tmpqrlh6ih1/gravity/log/celery.log <==
[2024-02-23 14:41:35,030: INFO/main] Task galaxy.clean_object_store_caches[f5e83b64-c60a-4621-bc5d-a6516ea91ec9] received
[2024-02-23 14:41:35,031: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7f9f1756ed90> (args:('galaxy.clean_object_store_caches', 'f5e83b64-c60a-4621-bc5d-a6516ea91ec9', {'lang': 'py', 'task': 'galaxy.clean_object_store_caches', 'id': 'f5e83b64-c60a-4621-bc5d-a6516ea91ec9', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': 'f5e83b64-c60a-4621-bc5d-a6516ea91ec9', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen78504@laila', 'ignore_result': False, 'properties': {'correlation_id': 'f5e83b64-c60a-4621-bc5d-a6516ea91ec9', 'reply_to': 'a834fe8d-fc9c-31a2-9791-be846a6fc4af', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '52a407fc-3529-4119-bd33-a501e38607aa'}, 'reply_to': 'a834fe8d-fc9c-31a2-9791-be846a6fc4af', 'correlation_id': 'f5e83b64-c60a-4621-bc5d-a6516ea91ec9', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-02-23 14:41:35,033: INFO/main] Successfully executed Celery task clean_object_store_caches to prune object store cache directories clean_object_store_caches to prune object store cache directories (0.532 ms)
[2024-02-23 14:41:35,034: INFO/main] Task galaxy.clean_object_store_caches[f5e83b64-c60a-4621-bc5d-a6516ea91ec9] succeeded in 0.0018830089829862118s: None

==> /tmp/tmpqrlh6ih1/gravity/log/gunicorn.log <==
uvicorn.access INFO 2024-02-23 14:41:38,212 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:54156 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:48,216 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53112 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:41:59,218 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:47208 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:42:07,092 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:38240 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:42:09,213 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:38256 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:42:10,121 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:38256 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:42:11,819 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:38256 - "GET /api/tools/ncbi_fcs_adaptor/build?version=latest&tool_version=latest HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:42:11,910 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:38256 - "POST /api/tools/ncbi_fcs_adaptor/build HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:42:13,151 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:38256 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:42:16,179 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40396 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:42:19,211 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40404 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:42:19,221 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40416 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:42:21,206 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40416 - "POST /api/tools/ncbi_fcs_adaptor/build HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:42:22,239 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40416 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:42:25,268 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40428 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:42:28,299 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:54006 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:42:29,216 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:54006 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:42:31,328 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:54008 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:42:34,358 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:54024 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:42:37,390 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:60548 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:42:39,218 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:60548 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:42:40,419 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:60548 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:42:43,450 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:60564 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:42:46,483 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59152 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:42:50,223 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59156 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:42:50,226 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59160 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:43:00,219 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:35248 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:43:10,212 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51892 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:43:21,208 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:47266 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:43:31,217 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:56258 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:43:41,211 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45128 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:43:51,208 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53190 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:44:03,211 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:44558 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:44:21,108 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:35914 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:44:21,111 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:35922 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:44:24,142 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:35934 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:44:27,170 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46974 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:44:30,199 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46978 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:44:31,076 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46978 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:44:33,228 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46980 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:44:36,257 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59440 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:44:39,287 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59442 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:44:41,080 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59442 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:44:42,325 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59442 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:44:45,358 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59446 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:44:48,387 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33128 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:44:51,081 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33136 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:44:51,415 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33136 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:44:54,446 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:33146 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:44:57,476 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59288 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:00,507 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59292 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:01,083 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59292 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:03,547 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59304 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:06,581 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:50814 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:09,611 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:50820 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:11,084 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:50820 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:12,643 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:50820 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:15,672 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:55644 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:18,702 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:55654 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:21,086 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:55666 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:21,730 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:55666 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:25,210 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:55680 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:26,488 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:55680 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:29,524 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:43894 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:31,088 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:43894 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:32,554 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:43894 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:35,586 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:43896 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:38,615 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:60812 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:41,108 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:60828 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:41,646 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:60828 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:44,678 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:60840 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:47,716 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:34606 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:50,747 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:34620 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:51,092 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:34620 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:53,780 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:34624 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:56,810 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:43404 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:45:59,843 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:43406 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:01,093 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:43406 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:02,885 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:43406 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:05,916 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:55884 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:08,951 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:55896 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:11,095 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:55910 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:11,983 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:55910 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:15,013 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:55920 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:18,043 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:42768 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:21,074 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:42780 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:21,095 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:42794 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:24,116 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:42804 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:27,147 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45726 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:30,176 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45730 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:31,096 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45730 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:33,207 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45732 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200

==> /tmp/tmpqrlh6ih1/gravity/log/celery-beat.log <==
[2024-02-23 14:46:34,296: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-02-23 14:46:34,297: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /tmp/tmpqrlh6ih1/gravity/log/gunicorn.log <==
uvicorn.access INFO 2024-02-23 14:46:36,235 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:48966 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:39,266 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:48982 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:41,098 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:48982 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:42,295 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:48982 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:45,325 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:48996 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:48,356 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:37342 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:51,108 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:37354 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:51,384 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:37354 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:54,415 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:37356 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:46:57,446 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59558 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:00,478 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59572 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:01,102 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59572 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:03,507 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59582 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:06,538 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:48358 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:09,566 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:48370 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:11,103 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:48370 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:12,592 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:48370 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:15,621 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:48386 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:18,657 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:50644 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:21,107 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:50650 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:21,686 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:50650 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:24,717 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:50664 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:27,747 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:42422 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:30,777 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:42436 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:31,107 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:42436 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:33,807 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:42440 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:36,836 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46004 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:39,863 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46018 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:41,108 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46018 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:42,892 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46018 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:45,921 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57628 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:48,951 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57632 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:51,111 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57644 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:51,978 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57644 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:55,007 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57660 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:47:58,036 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49826 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:48:01,065 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49842 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:48:01,109 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49842 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:48:04,207 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:49856 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:48:11,204 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:43370 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:48:22,200 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:56118 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:48:32,203 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46388 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:48:43,205 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:44136 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:48:53,213 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:51218 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:49:05,199 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:59494 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:50:03,199 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58916 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:50:06,195 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:56064 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:51:03,204 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46606 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:51:07,197 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:58106 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200

==> /tmp/tmpqrlh6ih1/gravity/log/celery-beat.log <==
[2024-02-23 14:51:34,270: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-02-23 14:51:34,271: INFO/MainProcess] Scheduler: Sending due task clean-object-store-caches (galaxy.clean_object_store_caches)
[2024-02-23 14:51:34,287: DEBUG/MainProcess] galaxy.clean_object_store_caches sent. id->2e7725dc-31d4-4d56-8afd-8dae5ec0815c
[2024-02-23 14:51:34,288: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /tmp/tmpqrlh6ih1/gravity/log/celery.log <==
[2024-02-23 14:51:35,170: INFO/main] Task galaxy.clean_object_store_caches[2e7725dc-31d4-4d56-8afd-8dae5ec0815c] received
[2024-02-23 14:51:35,171: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7f9f1756ed90> (args:('galaxy.clean_object_store_caches', '2e7725dc-31d4-4d56-8afd-8dae5ec0815c', {'lang': 'py', 'task': 'galaxy.clean_object_store_caches', 'id': '2e7725dc-31d4-4d56-8afd-8dae5ec0815c', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '2e7725dc-31d4-4d56-8afd-8dae5ec0815c', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen78504@laila', 'ignore_result': False, 'properties': {'correlation_id': '2e7725dc-31d4-4d56-8afd-8dae5ec0815c', 'reply_to': 'a834fe8d-fc9c-31a2-9791-be846a6fc4af', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '3b2497f6-7230-41ee-afbb-d68e1f75fbfd'}, 'reply_to': 'a834fe8d-fc9c-31a2-9791-be846a6fc4af', 'correlation_id': '2e7725dc-31d4-4d56-8afd-8dae5ec0815c', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-02-23 14:51:35,174: INFO/main] Successfully executed Celery task clean_object_store_caches to prune object store cache directories clean_object_store_caches to prune object store cache directories (0.612 ms)
[2024-02-23 14:51:35,174: INFO/main] Task galaxy.clean_object_store_caches[2e7725dc-31d4-4d56-8afd-8dae5ec0815c] succeeded in 0.0025258829118683934s: None

==> /tmp/tmpqrlh6ih1/gravity/log/gunicorn.log <==
uvicorn.access INFO 2024-02-23 14:52:03,197 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:34074 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:52:08,198 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:46298 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:53:03,199 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:52976 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:53:04,797 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:52976 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:53:08,199 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:56382 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:53:14,193 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:56384 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:53:24,195 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:57160 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:53:35,193 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:37546 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:53:45,192 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:47560 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:53:55,194 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:53882 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:54:09,190 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:52604 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:54:19,613 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:42472 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:54:19,616 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:42476 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:54:22,643 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:42492 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:54:25,672 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:44058 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:54:28,700 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:44072 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:54:29,595 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:44072 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:54:31,729 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:44088 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:54:34,768 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:44090 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:54:37,802 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:60124 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:54:39,595 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:60124 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:54:40,835 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:60124 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:54:43,874 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:60140 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:54:46,903 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45230 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:54:49,596 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45246 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:54:49,934 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45246 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:54:52,972 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:45260 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:54:56,003 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:50512 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:54:59,031 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:50520 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:54:59,599 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:50520 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:02,064 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:50532 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:05,104 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:50546 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:08,135 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:54120 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:09,600 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:54120 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:11,164 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:54120 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:14,192 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:54122 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:17,223 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:44288 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:19,605 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:44296 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:20,251 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:44296 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:23,280 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:44312 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:26,311 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:39666 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:29,341 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:39682 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:29,603 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:39682 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:32,371 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:39686 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:35,401 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:39696 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:38,427 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:55476 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:39,604 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:55476 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:41,455 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:55476 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:44,482 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:55490 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:47,511 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:38200 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:49,607 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:38202 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:50,551 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:38202 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:53,580 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:38218 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200
uvicorn.access INFO 2024-02-23 14:55:56,609 [pN:main.1,p:78709,tN:MainThread] 127.0.0.1:40354 - "GET /history/current_history_json?since=2024-02-23T19:39:28.000303 HTTP/1.1" 200

==> /tmp/tmpqrlh6ih1/gravity/log/celery-beat.log <==
[2024-02-23 14:56:34,388: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-02-23 14:56:34,389: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-02-23 15:01:34,361: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-02-23 15:01:34,363: INFO/MainProcess] Scheduler: Sending due task clean-object-store-caches (galaxy.clean_object_store_caches)
[2024-02-23 15:01:34,379: DEBUG/MainProcess] galaxy.clean_object_store_caches sent. id->535f1714-1353-40ac-acee-799c6b05d637
[2024-02-23 15:01:34,380: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /tmp/tmpqrlh6ih1/gravity/log/celery.log <==
[2024-02-23 15:01:35,002: INFO/main] Task galaxy.clean_object_store_caches[535f1714-1353-40ac-acee-799c6b05d637] received
[2024-02-23 15:01:35,002: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7f9f1756ed90> (args:('galaxy.clean_object_store_caches', '535f1714-1353-40ac-acee-799c6b05d637', {'lang': 'py', 'task': 'galaxy.clean_object_store_caches', 'id': '535f1714-1353-40ac-acee-799c6b05d637', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '535f1714-1353-40ac-acee-799c6b05d637', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen78504@laila', 'ignore_result': False, 'properties': {'correlation_id': '535f1714-1353-40ac-acee-799c6b05d637', 'reply_to': 'a834fe8d-fc9c-31a2-9791-be846a6fc4af', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '02332643-0c8b-4178-9919-02885eee82d3'}, 'reply_to': 'a834fe8d-fc9c-31a2-9791-be846a6fc4af', 'correlation_id': '535f1714-1353-40ac-acee-799c6b05d637', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-02-23 15:01:35,005: INFO/main] Successfully executed Celery task clean_object_store_caches to prune object store cache directories clean_object_store_caches to prune object store cache directories (0.552 ms)
[2024-02-23 15:01:35,040: INFO/main] Task galaxy.clean_object_store_caches[535f1714-1353-40ac-acee-799c6b05d637] succeeded in 0.03627739998046309s: None

==> /tmp/tmpqrlh6ih1/gravity/log/celery-beat.log <==
[2024-02-23 15:06:34,480: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-02-23 15:06:34,482: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-02-23 15:11:34,383: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-02-23 15:11:34,384: INFO/MainProcess] Scheduler: Sending due task clean-object-store-caches (galaxy.clean_object_store_caches)
[2024-02-23 15:11:34,400: DEBUG/MainProcess] galaxy.clean_object_store_caches sent. id->6eb22bfa-2bec-4d16-ba81-b677c429938a
[2024-02-23 15:11:34,400: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /tmp/tmpqrlh6ih1/gravity/log/celery.log <==
[2024-02-23 15:11:35,103: INFO/main] Task galaxy.clean_object_store_caches[6eb22bfa-2bec-4d16-ba81-b677c429938a] received
[2024-02-23 15:11:35,104: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7f9f1756ed90> (args:('galaxy.clean_object_store_caches', '6eb22bfa-2bec-4d16-ba81-b677c429938a', {'lang': 'py', 'task': 'galaxy.clean_object_store_caches', 'id': '6eb22bfa-2bec-4d16-ba81-b677c429938a', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '6eb22bfa-2bec-4d16-ba81-b677c429938a', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen78504@laila', 'ignore_result': False, 'properties': {'correlation_id': '6eb22bfa-2bec-4d16-ba81-b677c429938a', 'reply_to': 'a834fe8d-fc9c-31a2-9791-be846a6fc4af', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': 'f8974f4e-d12f-44c5-8432-dd8db2f74b43'}, 'reply_to': 'a834fe8d-fc9c-31a2-9791-be846a6fc4af', 'correlation_id': '6eb22bfa-2bec-4d16-ba81-b677c429938a', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-02-23 15:11:35,107: INFO/main] Successfully executed Celery task clean_object_store_caches to prune object store cache directories clean_object_store_caches to prune object store cache directories (0.548 ms)
[2024-02-23 15:11:35,107: INFO/main] Task galaxy.clean_object_store_caches[6eb22bfa-2bec-4d16-ba81-b677c429938a] succeeded in 0.0018642700742930174s: None