Mercurial > repos > richard-burhans > ncbi_fcs_adaptor
diff do-test.bash @ 0:d55ad8533d58 draft default tip
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/ncbi_fcs_adaptor commit 74ccb005520db16be005e6471e8624357aca7d94
author | richard-burhans |
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date | Fri, 01 Mar 2024 18:26:57 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/do-test.bash Fri Mar 01 18:26:57 2024 +0000 @@ -0,0 +1,15 @@ +#!/usr/bin/env bash + +export "PLANEMO_GLOBAL_CONFIG_PATH=/scratch/rico/.planemo" +export "PLANEMO_GLOBAL_WORKSPACE=/scratch/rico/.planemo" + +rm -rf /tmp/tmp* /scratch/rico/.planemo + +planemo \ + --verbose \ + test \ + --job_config_file=/scratch/rico/galaxytools/tools/ncbi_fcs_adaptor/planemo_job_conf.xml \ + --no_cleanup \ + --galaxy_root=/scratch/rico/galaxy 2>&1 \ + | tee test.log +