Mercurial > repos > richard-burhans > segalign

annotate gapped_extension_options.xml @ 16:4966e095e3c3 draft

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planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 6cf972d7f1c9ecb097994494a27d00906c6c3e4d
author richard-burhans
date Tue, 30 Jul 2024 17:19:56 +0000 (8 months ago)
parents f9e91add973c
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5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
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1 <macros>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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2 <xml name="gapped_extension_options">
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
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3 <section name="gapped_extension_options" expanded="false" title="Gapped Extension Options">
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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4 <param argument="--ydrop" type="integer" value="9430" label="Y-drop value for gapped extension"/>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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5 <param argument="--gappedthresh" type="integer" value="" optional="true" label="Score threshold for gapped alignments"/>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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6 <param argument="--notrivial" type="boolean" checked="false" label="Don't output a trivial self-alignment block if the target and query sequences are identical"/>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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7 </section>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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8 </xml>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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9 </macros>