Mercurial > repos > richard-burhans > segalign
annotate system_options.xml @ 16:4966e095e3c3 draft
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 6cf972d7f1c9ecb097994494a27d00906c6c3e4d
author | richard-burhans |
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date | Tue, 30 Jul 2024 17:19:56 +0000 |
parents | 5c72425b7f1b |
children | 25fa179d9d0a |
rev | line source |
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5c72425b7f1b
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
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1 <macros> |
5c72425b7f1b
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff
changeset
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2 <xml name="system_options"> |
5c72425b7f1b
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
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changeset
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3 <section name="system_options" title="System Options"> |
5c72425b7f1b
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff
changeset
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4 <param argument="--wga_chunk_size" type="integer" value="250000" label="Chunk sizes for GPU calls for Xdrop - ⚠ change only if you are a developer"/> |
5c72425b7f1b
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff
changeset
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5 <param argument="--lastz_interval_size" type="integer" value="10000000" label="LASTZ interval for Ydrop - ⚠ change only if you are a developer"/> |
5c72425b7f1b
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff
changeset
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6 <param argument="--seq_block_size" type="integer" value="500000000" label="LASTZ interval for Ydrop - ⚠ change only if you are a developer"/> |
5c72425b7f1b
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff
changeset
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7 <param argument="--num_gpu" type="integer" value="-1" label="Specify number of GPUs to use - -1 if all the GPUs should be used"/> |
5c72425b7f1b
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff
changeset
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8 <param argument="--debug" type="boolean" value="false" label="Print debug messages"/> |
5c72425b7f1b
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff
changeset
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9 </section> |
5c72425b7f1b
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff
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10 </xml> |
5c72425b7f1b
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff
changeset
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11 </macros> |