Mercurial > repos > richard-burhans > segalign
annotate system_options.xml @ 22:860e1f6f3de4 draft
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 52a5597a89b6f4ecba8d2c45ef0369d8d2285248
author | richard-burhans |
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date | Mon, 12 Aug 2024 15:41:13 +0000 |
parents | 25fa179d9d0a |
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5c72425b7f1b
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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1 <macros> |
5c72425b7f1b
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff
changeset
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2 <xml name="system_options"> |
5c72425b7f1b
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
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3 <section name="system_options" title="System Options"> |
5c72425b7f1b
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff
changeset
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4 <param argument="--wga_chunk_size" type="integer" value="250000" label="Chunk sizes for GPU calls for Xdrop - ⚠ change only if you are a developer"/> |
5c72425b7f1b
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff
changeset
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5 <param argument="--lastz_interval_size" type="integer" value="10000000" label="LASTZ interval for Ydrop - ⚠ change only if you are a developer"/> |
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25fa179d9d0a
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit e4e05d23d9da18ea87bc352122ca9e6cfa73d1c7
richard-burhans
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0
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6 <param argument="--seq_block_size" type="integer" value="400000000" label="LASTZ interval for Ydrop - ⚠ change only if you are a developer"/> |
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5c72425b7f1b
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff
changeset
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7 <param argument="--num_gpu" type="integer" value="-1" label="Specify number of GPUs to use - -1 if all the GPUs should be used"/> |
5c72425b7f1b
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff
changeset
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8 <param argument="--debug" type="boolean" value="false" label="Print debug messages"/> |
5c72425b7f1b
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff
changeset
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9 </section> |
5c72425b7f1b
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff
changeset
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10 </xml> |
5c72425b7f1b
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff
changeset
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11 </macros> |