annotate serve.log @ 1:d3f11ae6790c draft

planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b

Created directory for Galaxy configuration [/scratch/rico/tmp/tmp12w4107b]
Writing dependency_resolvers_config_file to path /scratch/rico/tmp/tmp12w4107b/resolvers_conf.xml with contents [<dependency_resolvers>
  <tool_shed_packages />
  <conda auto_init="True" auto_install="True" ensure_channels="conda-forge,bioconda,defaults" prefix="/afs/bx.psu.edu/home/rico/miniconda3" condarc_override="/afs/bx.psu.edu/home/rico/.planemo/condarc" />
  <conda versionless="true" auto_init="True" auto_install="True" ensure_channels="conda-forge,bioconda,defaults" prefix="/afs/bx.psu.edu/home/rico/miniconda3" condarc_override="/afs/bx.psu.edu/home/rico/.planemo/condarc" />
</dependency_resolvers>
]
Writing tool_conf to path /scratch/rico/tmp/tmp12w4107b/tool_conf.xml with contents [<toolbox>
  <tool file="data_source/upload.xml" />
  <tool file="/scratch/rico/galaxytools/tools/segalign/segalign.xml" />
</toolbox>
]
Starting Galaxy with command [cd /scratch/rico/galaxy && if [ -d .venv ]; then GALAXY_VIRTUAL_ENV=.venv; else GALAXY_VIRTUAL_ENV=/afs/bx.psu.edu/home/rico/.planemo/gx_venv_3; fi && export GALAXY_VIRTUAL_ENV && echo "Set \$GALAXY_VIRTUAL_ENV to $GALAXY_VIRTUAL_ENV" && if [ -e "$GALAXY_VIRTUAL_ENV" ]; then echo "Virtual environment directory exists."; else echo "Virtual environment directory does not exist."; fi && if [ ! -e "$GALAXY_VIRTUAL_ENV" ]; then /scratch/rico/.venv/bin/virtualenv $GALAXY_VIRTUAL_ENV -p /scratch/rico/.venv/bin/python3; echo "Created virtualenv"; fi && echo "Set \$GALAXY_VIRTUAL_ENV to $GALAXY_VIRTUAL_ENV" && if [ -e "$GALAXY_VIRTUAL_ENV" ]; then echo "Virtual environment directory exists."; else echo "Virtual environment directory does not exist."; fi && if [ -e "$GALAXY_VIRTUAL_ENV" ]; then . "$GALAXY_VIRTUAL_ENV"/bin/activate; echo "Activated a virtualenv for Galaxy"; echo "$VIRTUAL_ENV"; else echo "Failed to activate virtualenv."; fi && bash -c 'pwd' && bash -c 'which python' && bash -c 'which pip' && bash -c 'echo $GALAXY_VIRTUAL_ENV' && bash -c 'echo $VIRTUAL_ENV' && bash -c 'ls -a' && /scratch/rico/galaxy/run.sh $COMMON_STARTUP_ARGS --server-name main]
With environment variables:
============================
GALAXY_CONFIG_OVERRIDE_MASTER_API_KEY="test_key"
GALAXY_CONFIG_OVERRIDE_ADMIN_USERS="[e-mail],[e-mail]"
GALAXY_CONFIG_OVERRIDE_EXPOSE_DATASET_PATH="True"
GALAXY_CONFIG_OVERRIDE_COLLECT_OUTPUTS_FROM="job_working_directory"
GALAXY_CONFIG_OVERRIDE_ALLOW_PATH_PASTE="True"
GALAXY_CONFIG_OVERRIDE_CHECK_MIGRATE_TOOLS="False"
GALAXY_CONFIG_OVERRIDE_USE_CACHED_DEPENDENCY_MANAGER="True"
GALAXY_CONFIG_OVERRIDE_BRAND="Configured by Planemo"
GALAXY_CONFIG_OVERRIDE_STRICT_CWL_VALIDATION="True"
GALAXY_CONFIG_OVERRIDE_CLEANUP_JOB="never"
GALAXY_CONFIG_OVERRIDE_SINGLE_USER="[e-mail]"
GALAXY_CONFIG_OVERRIDE_SERVER_NAME="main"
GALAXY_CONFIG_OVERRIDE_FTP_UPLOAD_DIR_TEMPLATE="${ftp_upload_dir}"
GALAXY_CONFIG_OVERRIDE_FTP_UPLOAD_PURGE="False"
GALAXY_CONFIG_OVERRIDE_FTP_UPLOAD_DIR="/scratch/rico/galaxytools/tools/segalign/test-data"
GALAXY_CONFIG_OVERRIDE_FTP_UPLOAD_SITE="Test Data"
GALAXY_CONFIG_OVERRIDE_CHECK_UPLOAD_CONTENT="False"
GALAXY_CONFIG_OVERRIDE_TOOL_DEPENDENCY_DIR="/scratch/rico/tmp/tmp12w4107b/deps"
GALAXY_CONFIG_OVERRIDE_FILE_PATH="/scratch/rico/tmp/tmp12w4107b/files"
GALAXY_CONFIG_OVERRIDE_NEW_FILE_PATH="/scratch/rico/tmp/tmp12w4107b/tmp"
GALAXY_CONFIG_OVERRIDE_TOOL_CONFIG_FILE="/scratch/rico/tmp/tmp12w4107b/tool_conf.xml,/scratch/rico/tmp/tmp12w4107b/shed_tools_conf.xml"
GALAXY_CONFIG_OVERRIDE_TOOL_SHEDS_CONFIG_FILE="/scratch/rico/tmp/tmp12w4107b/tool_sheds_conf.xml"
GALAXY_CONFIG_OVERRIDE_MANAGE_DEPENDENCY_RELATIONSHIPS="False"
GALAXY_CONFIG_OVERRIDE_JOB_WORKING_DIRECTORY="/scratch/rico/tmp/tmp12w4107b/job_working_directory"
GALAXY_CONFIG_OVERRIDE_TEMPLATE_CACHE_PATH="/scratch/rico/tmp/tmp12w4107b/compiled_templates"
GALAXY_CONFIG_OVERRIDE_CITATION_CACHE_TYPE="file"
GALAXY_CONFIG_OVERRIDE_CITATION_CACHE_DATA_DIR="/scratch/rico/tmp/tmp12w4107b/citations/data"
GALAXY_CONFIG_OVERRIDE_CITATION_CACHE_LOCK_DIR="/scratch/rico/tmp/tmp12w4107b/citations/lock"
GALAXY_CONFIG_OVERRIDE_DATABASE_AUTO_MIGRATE="True"
GALAXY_CONFIG_OVERRIDE_ENABLE_BETA_TOOL_FORMATS="True"
GALAXY_CONFIG_OVERRIDE_ID_SECRET="6bf329f92f26d5526e6bcd233e8760d0"
GALAXY_CONFIG_OVERRIDE_LOG_LEVEL="DEBUG"
GALAXY_CONFIG_OVERRIDE_DEBUG="true"
GALAXY_CONFIG_OVERRIDE_WATCH_TOOLS="auto"
GALAXY_CONFIG_OVERRIDE_DEFAULT_JOB_SHELL="/bin/bash"
GALAXY_CONFIG_OVERRIDE_INTEGRATED_TOOL_PANEL_CONFIG="/scratch/rico/tmp/tmp12w4107b/integrated_tool_panel_conf.xml"
GALAXY_CONFIG_OVERRIDE_MIGRATED_TOOLS_CONFIG="/scratch/rico/tmp/tmp12w4107b/empty_tool_conf.xml"
GALAXY_CONFIG_OVERRIDE_TEST_DATA_DIR="/scratch/rico/galaxytools/tools/segalign/test-data"
GALAXY_CONFIG_OVERRIDE_SHED_DATA_MANAGER_CONFIG_FILE="/scratch/rico/tmp/tmp12w4107b/shed_data_manager_conf.xml"
GALAXY_CONFIG_OVERRIDE_OUTPUTS_TO_WORKING_DIRECTORY="True"
GALAXY_CONFIG_OVERRIDE_OBJECT_STORE_STORE_BY="uuid"
GALAXY_CONFIG_OVERRIDE_DATABASE_CONNECTION="sqlite:////scratch/rico/tmp/tmp12w4107b/galaxy.sqlite?isolation_level=IMMEDIATE"
GALAXY_CONFIG_OVERRIDE_JOB_CONFIG_FILE="/scratch/rico/tmp/tmp12w4107b/job_conf.xml"
GALAXY_CONFIG_OVERRIDE_JOB_METRICS_CONFIG_FILE="/scratch/rico/tmp/tmp12w4107b/job_metrics_conf.xml"
GALAXY_CONFIG_OVERRIDE_DEPENDENCY_RESOLVERS_CONFIG_FILE="/scratch/rico/tmp/tmp12w4107b/resolvers_conf.xml"
GALAXY_SKIP_CLIENT_BUILD="1"
GALAXY_DEVELOPMENT_ENVIRONMENT="1"
GALAXY_LOG="main.log"
GALAXY_PID="main.pid"
GALAXY_CONFIG_FILE="/scratch/rico/tmp/tmp12w4107b/galaxy.yml"
GRAVITY_STATE_DIR="/scratch/rico/tmp/tmp12w4107b/gravity"
SUPERVISORD_SOCKET="/scratch/rico/tmp/tmpz69kch1_.sock"
============================
galaxy.util.commands WARNING 2024-04-17 16:39:24,421: Passing program arguments as a string may be a security hazard if combined with untrusted input
Set $GALAXY_VIRTUAL_ENV to /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3
Virtual environment directory exists.
Set $GALAXY_VIRTUAL_ENV to /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3
Virtual environment directory exists.
Activated a virtualenv for Galaxy
/afs/bx.psu.edu/home/rico/.planemo/gx_venv_3
/scratch/rico/galaxy
/afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/bin/python
/afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/bin/pip
/afs/bx.psu.edu/home/rico/.planemo/gx_venv_3
/afs/bx.psu.edu/home/rico/.planemo/gx_venv_3
.
..
check_model.sh
.ci
.circleci
CITATION
client
CODE_OF_CONDUCT.md
config
contrib
CONTRIBUTING.md
CONTRIBUTORS.md
.coveragerc
create_toolshed_db.sh
cron
database
doc
.dockerignore
extract_dataset_parts.sh
.flake8
.git
.gitattributes
.git-blame-ignore-revs
.github
.gitignore
.gitpod.yml
hooks
.isort.cfg
.k8s_ci.Dockerfile
lib
LICENSE.txt
main.log
Makefile
manage_db.sh
manage_toolshed_db.sh
mypy.ini
package.json
packages
.pre-commit-config.yaml.sample
pyproject.toml
pytest.ini
README.rst
.redocly.lint-ignore.yaml
.redocly.yaml
requirements.txt
rolling_restart.sh
run_reports.sh
run.sh
run_tests.sh
run_tool_shed.sh
scripts
SECURITY.md
static
templates
test
test-data
tool-data
tools
tox.ini
tsconfig.json
.vscode
Activating virtualenv at /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3
Requirement already satisfied: pip>=20.3 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (24.0)
Requirement already satisfied: wheel in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (0.43.0)
Looking in indexes: https://wheels.galaxyproject.org/simple, https://pypi.python.org/simple, https://wheels.galaxyproject.org/simple
Ignoring asynctest: markers 'python_version >= "3.7" and python_version < "3.8"' don't match your environment
Ignoring cached-property: markers 'python_version >= "3.7" and python_version < "3.8"' don't match your environment
Ignoring colorama: markers 'python_version >= "3.7" and python_version < "3.12" and platform_system == "Windows"' don't match your environment
Ignoring numpy: markers 'python_version >= "3.7" and python_version < "3.8"' don't match your environment
Ignoring pyreadline3: markers 'sys_platform == "win32" and python_version >= "3.8" and python_version < "3.12"' don't match your environment
Ignoring pyreadline: markers 'sys_platform == "win32" and python_version < "3.8" and python_version >= "3.7"' don't match your environment
Requirement already satisfied: a2wsgi==1.6.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 3)) (1.6.0)
Requirement already satisfied: adal==1.2.7 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 4)) (1.2.7)
Requirement already satisfied: aiofiles==22.1.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 5)) (22.1.0)
Requirement already satisfied: aiohttp==3.8.3 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 6)) (3.8.3)
Requirement already satisfied: aiosignal==1.3.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 7)) (1.3.1)
Requirement already satisfied: alembic-utils==0.7.8 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 8)) (0.7.8)
Requirement already satisfied: alembic==1.9.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 9)) (1.9.2)
Requirement already satisfied: amqp==5.1.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 10)) (5.1.1)
Requirement already satisfied: anyio==3.6.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 11)) (3.6.2)
Requirement already satisfied: apispec==6.0.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 12)) (6.0.2)
Requirement already satisfied: appdirs==1.4.4 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 13)) (1.4.4)
Requirement already satisfied: arcp==0.2.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 14)) (0.2.1)
Requirement already satisfied: argcomplete==2.0.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 15)) (2.0.0)
Requirement already satisfied: async-timeout==4.0.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 16)) (4.0.2)
Requirement already satisfied: attmap==0.13.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 18)) (0.13.2)
Requirement already satisfied: attrs==22.2.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 19)) (22.2.0)
Requirement already satisfied: babel==2.11.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 20)) (2.11.0)
Requirement already satisfied: bagit-profile==1.3.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 21)) (1.3.1)
Requirement already satisfied: bagit==1.8.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 22)) (1.8.1)
Requirement already satisfied: bcrypt==4.0.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 23)) (4.0.1)
Requirement already satisfied: bdbag==1.6.3 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 24)) (1.6.3)
Requirement already satisfied: beaker==1.11.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 25)) (1.11.0)
Requirement already satisfied: billiard==3.6.4.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 26)) (3.6.4.0)
Requirement already satisfied: bioblend==1.0.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 27)) (1.0.0)
Requirement already satisfied: bleach==5.0.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 28)) (5.0.1)
Requirement already satisfied: boltons==21.0.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 29)) (21.0.0)
Requirement already satisfied: boto==2.49.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 30)) (2.49.0)
Requirement already satisfied: bx-python==0.9.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 31)) (0.9.0)
Requirement already satisfied: cachecontrol==0.12.11 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 32)) (0.12.11)
Requirement already satisfied: celery==5.2.7 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 35)) (5.2.7)
Requirement already satisfied: certifi==2022.12.7 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 36)) (2022.12.7)
Requirement already satisfied: cffi==1.15.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 37)) (1.15.1)
Requirement already satisfied: charset-normalizer==2.1.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 38)) (2.1.1)
Requirement already satisfied: cheetah3==3.2.6.post1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 39)) (3.2.6.post1)
Requirement already satisfied: circus==0.18.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 40)) (0.18.0)
Requirement already satisfied: click-didyoumean==0.3.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 41)) (0.3.0)
Requirement already satisfied: click-plugins==1.1.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 42)) (1.1.1)
Requirement already satisfied: click-repl==0.2.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 43)) (0.2.0)
Requirement already satisfied: click==8.1.3 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 44)) (8.1.3)
Requirement already satisfied: cloudauthz==0.6.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 45)) (0.6.0)
Requirement already satisfied: cloudbridge==3.1.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 46)) (3.1.0)
Requirement already satisfied: coloredlogs==15.0.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 48)) (15.0.1)
Requirement already satisfied: conda-package-streaming==0.7.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 49)) (0.7.0)
Requirement already satisfied: cryptography==39.0.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 50)) (39.0.0)
Requirement already satisfied: cwl-upgrader==1.2.4 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 51)) (1.2.4)
Requirement already satisfied: cwl-utils==0.21 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 52)) (0.21)
Requirement already satisfied: cwltool==3.1.20221109155812 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 53)) (3.1.20221109155812)
Requirement already satisfied: cython==0.29.34 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 54)) (0.29.34)
Requirement already satisfied: decorator==5.1.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 55)) (5.1.1)
Requirement already satisfied: defusedxml==0.7.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 56)) (0.7.1)
Requirement already satisfied: deprecation==2.1.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 57)) (2.1.0)
Requirement already satisfied: dictobj==0.4 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 58)) (0.4)
Requirement already satisfied: dnspython==2.3.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 59)) (2.3.0)
Requirement already satisfied: docopt==0.6.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 60)) (0.6.2)
Requirement already satisfied: docutils==0.16 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 61)) (0.16)
Requirement already satisfied: ecdsa==0.18.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 62)) (0.18.0)
Requirement already satisfied: edam-ontology==1.25.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 63)) (1.25.2)
Requirement already satisfied: email-validator==1.3.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 64)) (1.3.0)
Requirement already satisfied: fastapi-utils==0.2.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 65)) (0.2.1)
Requirement already satisfied: fastapi==0.91.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 66)) (0.91.0)
Requirement already satisfied: flupy==1.2.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 67)) (1.2.0)
Requirement already satisfied: frozenlist==1.3.3 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 68)) (1.3.3)
Requirement already satisfied: fs==2.4.16 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 69)) (2.4.16)
Requirement already satisfied: funcsigs==1.0.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 70)) (1.0.2)
Requirement already satisfied: future==0.18.3 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 71)) (0.18.3)
Requirement already satisfied: galaxy-sequence-utils==1.1.5 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 72)) (1.1.5)
Requirement already satisfied: galaxy2cwl==0.1.4 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 73)) (0.1.4)
Requirement already satisfied: gravity==1.0.3 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 74)) (1.0.3)
Requirement already satisfied: greenlet==2.0.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 75)) (2.0.1)
Requirement already satisfied: gunicorn==20.1.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 76)) (20.1.0)
Requirement already satisfied: gxformat2==0.18.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 77)) (0.18.0)
Requirement already satisfied: h11==0.14.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 78)) (0.14.0)
Requirement already satisfied: h5py==3.8.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 79)) (3.8.0)
Requirement already satisfied: humanfriendly==10.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 80)) (10.0)
Requirement already satisfied: idna==3.4 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 81)) (3.4)
Requirement already satisfied: importlib-metadata==4.13.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 82)) (4.13.0)
Requirement already satisfied: importlib-resources==5.10.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 83)) (5.10.2)
Requirement already satisfied: isa-rwval==0.10.10 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 84)) (0.10.10)
Requirement already satisfied: isodate==0.6.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 85)) (0.6.1)
Requirement already satisfied: jinja2==3.1.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 86)) (3.1.2)
Requirement already satisfied: jsonref==1.1.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 87)) (1.1.0)
Requirement already satisfied: jsonschema==4.17.3 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 88)) (4.17.3)
Requirement already satisfied: kombu==5.2.4 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 89)) (5.2.4)
Requirement already satisfied: lagom==2.2.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 90)) (2.2.0)
Requirement already satisfied: lockfile==0.12.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 91)) (0.12.2)
Requirement already satisfied: lxml==4.9.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 92)) (4.9.2)
Requirement already satisfied: mako==1.2.4 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 93)) (1.2.4)
Requirement already satisfied: markdown-it-py==2.1.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 94)) (2.1.0)
Requirement already satisfied: markdown==3.4.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 95)) (3.4.1)
Requirement already satisfied: markupsafe==2.1.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 96)) (2.1.2)
Requirement already satisfied: mdurl==0.1.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 97)) (0.1.2)
Requirement already satisfied: mercurial==6.3.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 98)) (6.3.2)
Requirement already satisfied: mistune==2.0.4 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 99)) (2.0.4)
Requirement already satisfied: mrcfile==1.4.3 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 100)) (1.4.3)
Requirement already satisfied: msgpack==1.0.4 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 101)) (1.0.4)
Requirement already satisfied: multidict==6.0.4 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 102)) (6.0.4)
Requirement already satisfied: mypy-extensions==0.4.3 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 103)) (0.4.3)
Requirement already satisfied: networkx==2.5 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 104)) (2.5)
Requirement already satisfied: nodeenv==1.7.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 105)) (1.7.0)
Requirement already satisfied: numpy==1.24.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 107)) (1.24.1)
Requirement already satisfied: oauthlib==3.2.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 108)) (3.2.2)
Requirement already satisfied: oyaml==1.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 109)) (1.0)
Requirement already satisfied: packaging==21.3 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 110)) (21.3)
Requirement already satisfied: paramiko==3.0.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 111)) (3.0.0)
Requirement already satisfied: parse==1.19.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 112)) (1.19.0)
Requirement already satisfied: parsley==1.3 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 113)) (1.3)
Requirement already satisfied: paste==3.5.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 114)) (3.5.2)
Requirement already satisfied: pastedeploy==3.0.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 115)) (3.0.1)
Requirement already satisfied: pbr==5.11.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 116)) (5.11.1)
Requirement already satisfied: pebble==5.0.3 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 117)) (5.0.3)
Requirement already satisfied: pkgutil-resolve-name==1.3.10 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 118)) (1.3.10)
Requirement already satisfied: prompt-toolkit==3.0.36 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 119)) (3.0.36)
Requirement already satisfied: prov==1.5.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 120)) (1.5.1)
Requirement already satisfied: psutil==5.9.4 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 121)) (5.9.4)
Requirement already satisfied: pulsar-galaxy-lib==0.15.5 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 122)) (0.15.5)
Requirement already satisfied: pyasn1==0.4.8 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 123)) (0.4.8)
Requirement already satisfied: pycparser==2.21 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 124)) (2.21)
Requirement already satisfied: pycryptodome==3.16.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 125)) (3.16.0)
Requirement already satisfied: pydantic-tes==0.1.5 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 126)) (0.1.5)
Requirement already satisfied: pydantic==1.10.4 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 127)) (1.10.4)
Requirement already satisfied: pydot==1.4.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 129)) (1.4.2)
Requirement already satisfied: pyeventsystem==0.1.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 130)) (0.1.0)
Requirement already satisfied: pyfaidx==0.7.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 131)) (0.7.1)
Requirement already satisfied: pygments==2.14.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 132)) (2.14.0)
Requirement already satisfied: pyjwt==2.6.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 133)) (2.6.0)
Requirement already satisfied: pykwalify==1.8.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 134)) (1.8.0)
Requirement already satisfied: pylibmagic==0.2.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 135)) (0.2.2)
Requirement already satisfied: pynacl==1.5.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 136)) (1.5.0)
Requirement already satisfied: pyparsing==3.0.9 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 137)) (3.0.9)
Requirement already satisfied: pyrsistent==0.19.3 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 140)) (0.19.3)
Requirement already satisfied: pysam==0.21.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 141)) (0.21.0)
Requirement already satisfied: python-dateutil==2.8.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 142)) (2.8.2)
Requirement already satisfied: python-jose==3.3.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 143)) (3.3.0)
Requirement already satisfied: python-magic==0.4.27 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 144)) (0.4.27)
Requirement already satisfied: python-multipart==0.0.7 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 145)) (0.0.7)
Requirement already satisfied: python3-openid==3.2.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 146)) (3.2.0)
Requirement already satisfied: pytz==2022.7.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 147)) (2022.7.1)
Requirement already satisfied: pyyaml==6.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 148)) (6.0)
Requirement already satisfied: pyzmq==25.0.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 149)) (25.0.0)
Requirement already satisfied: rdflib==6.2.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 150)) (6.2.0)
Requirement already satisfied: refgenconf==0.12.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 151)) (0.12.2)
Requirement already satisfied: repoze-lru==0.7 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 152)) (0.7)
Requirement already satisfied: requests-oauthlib==1.3.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 153)) (1.3.1)
Requirement already satisfied: requests-toolbelt==0.10.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 154)) (0.10.1)
Requirement already satisfied: requests-unixsocket==0.3.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 155)) (0.3.0)
Requirement already satisfied: requests==2.28.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 156)) (2.28.2)
Requirement already satisfied: rich==13.2.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 157)) (13.2.0)
Requirement already satisfied: rocrate==0.7.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 158)) (0.7.0)
Requirement already satisfied: routes==2.5.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 159)) (2.5.1)
Requirement already satisfied: rsa==4.9 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 160)) (4.9)
Requirement already satisfied: ruamel-yaml-clib==0.2.7 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 161)) (0.2.7)
Requirement already satisfied: ruamel-yaml==0.17.21 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 162)) (0.17.21)
Requirement already satisfied: schema-salad==8.3.20230109181936 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 163)) (8.3.20230109181936)
Requirement already satisfied: setuptools-scm==5.0.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 164)) (5.0.2)
Requirement already satisfied: setuptools==66.1.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 165)) (66.1.1)
Requirement already satisfied: shellescape==3.8.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 166)) (3.8.1)
Requirement already satisfied: six==1.16.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 167)) (1.16.0)
Requirement already satisfied: sniffio==1.3.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 168)) (1.3.0)
Requirement already satisfied: social-auth-core==4.0.3 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from social-auth-core[openidconnect]==4.0.3->-r requirements.txt (line 169)) (4.0.3)
Requirement already satisfied: sortedcontainers==2.4.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 170)) (2.4.0)
Requirement already satisfied: sqlalchemy-migrate==0.13.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 171)) (0.13.0)
Requirement already satisfied: sqlalchemy==1.4.46 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 172)) (1.4.46)
Requirement already satisfied: sqlitedict==2.1.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 173)) (2.1.0)
Requirement already satisfied: sqlparse==0.4.3 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 174)) (0.4.3)
Requirement already satisfied: starlette-context==0.3.5 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 175)) (0.3.5)
Requirement already satisfied: starlette==0.24.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 176)) (0.24.0)
Requirement already satisfied: supervisor==4.2.5 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 177)) (4.2.5)
Requirement already satisfied: svgwrite==1.4.3 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 178)) (1.4.3)
Requirement already satisfied: tempita==0.5.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 179)) (0.5.2)
Requirement already satisfied: tenacity==8.1.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 180)) (8.1.0)
Requirement already satisfied: tifffile==2021.11.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 181)) (2021.11.2)
Requirement already satisfied: tinydb==4.7.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 182)) (4.7.1)
Requirement already satisfied: tornado==6.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 183)) (6.2)
Requirement already satisfied: tqdm==4.64.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 184)) (4.64.1)
Requirement already satisfied: tuspy==1.0.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 185)) (1.0.0)
Requirement already satisfied: tuswsgi==0.5.5 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 186)) (0.5.5)
Requirement already satisfied: typing-extensions==4.4.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 187)) (4.4.0)
Requirement already satisfied: tzlocal==2.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 188)) (2.1)
Requirement already satisfied: ubiquerg==0.6.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 189)) (0.6.2)
Requirement already satisfied: urllib3==1.26.14 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 190)) (1.26.14)
Requirement already satisfied: uvicorn==0.20.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 191)) (0.20.0)
Requirement already satisfied: uvloop==0.17.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 192)) (0.17.0)
Requirement already satisfied: vine==5.0.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 193)) (5.0.0)
Requirement already satisfied: wcwidth==0.2.6 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 194)) (0.2.6)
Requirement already satisfied: webencodings==0.5.1 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 195)) (0.5.1)
Requirement already satisfied: webob==1.8.7 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 196)) (1.8.7)
Requirement already satisfied: whoosh==2.7.4 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 197)) (2.7.4)
Requirement already satisfied: yacman==0.8.4 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 198)) (0.8.4)
Requirement already satisfied: yarl==1.8.2 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 199)) (1.8.2)
Requirement already satisfied: zipp==3.11.0 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 200)) (3.11.0)
Requirement already satisfied: zipstream-new==1.1.8 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r requirements.txt (line 201)) (1.1.8)
Requirement already satisfied: zstandard>=0.15 in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from conda-package-streaming==0.7.0->-r requirements.txt (line 49)) (0.22.0)
Looking in indexes: https://wheels.galaxyproject.org/simple, https://pypi.python.org/simple
Requirement already satisfied: watchdog in /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r /dev/stdin (line 1)) (4.0.0)
The Galaxy client build is being skipped due to the SKIP_CLIENT_BUILD environment variable.
Activating virtualenv at /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3
Adding service gunicorn
Adding service celery
Adding service celery-beat
Executing: galaxy 
2024-04-17 16:40:05,126 WARN No file matches via include "/scratch/rico/tmp/tmp12w4107b/gravity/supervisor/supervisord.conf.d/*.conf"
2024-04-17 16:40:05,127 INFO Included extra file "/scratch/rico/tmp/tmp12w4107b/gravity/supervisor/supervisord.conf.d/_default_.d/galaxy_celery-beat_celery-beat.conf" during parsing
2024-04-17 16:40:05,127 INFO Included extra file "/scratch/rico/tmp/tmp12w4107b/gravity/supervisor/supervisord.conf.d/_default_.d/galaxy_celery_celery.conf" during parsing
2024-04-17 16:40:05,127 INFO Included extra file "/scratch/rico/tmp/tmp12w4107b/gravity/supervisor/supervisord.conf.d/_default_.d/galaxy_gunicorn_gunicorn.conf" during parsing
2024-04-17 16:40:05,323 INFO RPC interface 'supervisor' initialized
2024-04-17 16:40:05,324 CRIT Server 'unix_http_server' running without any HTTP authentication checking
2024-04-17 16:40:05,324 INFO supervisord started with pid 100445
2024-04-17 16:40:05,764 INFO spawned: 'celery' with pid 100447
2024-04-17 16:40:05,766 INFO spawned: 'celery-beat' with pid 100448
2024-04-17 16:40:05,769 INFO spawned: 'gunicorn' with pid 100449
==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==
Working directory: /scratch/rico/galaxy
Executing: PYTHONPATH=lib GALAXY_CONFIG_FILE=/scratch/rico/tmp/tmp12w4107b/galaxy.yml celery --app galaxy.celery worker --concurrency 2 --loglevel DEBUG --pool threads --queues celery,galaxy.internal,galaxy.external 

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
Working directory: /scratch/rico/galaxy
Executing: PYTHONPATH=lib GALAXY_CONFIG_FILE=/scratch/rico/tmp/tmp12w4107b/galaxy.yml gunicorn 'galaxy.webapps.galaxy.fast_factory:factory()' --timeout 300 --pythonpath lib -k galaxy.webapps.galaxy.workers.Worker -b 127.0.0.1:9090 --workers=1 --config python:galaxy.web_stack.gunicorn_config --preload 

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
Working directory: /scratch/rico/galaxy
Executing: PYTHONPATH=lib GALAXY_CONFIG_FILE=/scratch/rico/tmp/tmp12w4107b/galaxy.yml celery --app galaxy.celery beat --loglevel DEBUG --schedule /scratch/rico/tmp/tmp12w4107b/gravity/celery-beat-schedule

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==
Option master_api_key has been deprecated in favor of bootstrap_admin_api_key

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
Option master_api_key has been deprecated in favor of bootstrap_admin_api_key
2024-04-17 16:40:15,880 INFO success: celery entered RUNNING state, process has stayed up for > than 10 seconds (startsecs)
2024-04-17 16:40:15,880 INFO success: celery-beat entered RUNNING state, process has stayed up for > than 10 seconds (startsecs)
2024-04-17 16:40:20,886 INFO success: gunicorn entered RUNNING state, process has stayed up for > than 15 seconds (startsecs)
[2024-04-17 16:40:22,090: DEBUG/MainProcess] Setting default socket timeout to 30
[2024-04-17 16:40:22,091: INFO/MainProcess] beat: Starting...

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==
[2024-04-17 16:40:22,097: DEBUG/MainProcess] | Worker: Preparing bootsteps.
[2024-04-17 16:40:22,177: DEBUG/MainProcess] | Worker: Building graph...
[2024-04-17 16:40:22,178: DEBUG/MainProcess] | Worker: New boot order: {Timer, Hub, Pool, Autoscaler, Beat, StateDB, Consumer}

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-17 16:40:22,205: DEBUG/MainProcess] Current schedule:
<ScheduleEntry: prune-history-audit-table galaxy.prune_history_audit_table() <freq: 1.00 hour>
<ScheduleEntry: cleanup-short-term-storage galaxy.cleanup_short_term_storage() <freq: 1.00 hour>
<ScheduleEntry: celery.backend_cleanup celery.backend_cleanup() <crontab: 0 4 * * * (m/h/d/dM/MY)>
[2024-04-17 16:40:22,205: DEBUG/MainProcess] beat: Ticking with max interval->5.00 minutes
[2024-04-17 16:40:22,207: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==
[2024-04-17 16:40:22,448: DEBUG/MainProcess] | Consumer: Preparing bootsteps.
[2024-04-17 16:40:22,449: DEBUG/MainProcess] | Consumer: Building graph...
[2024-04-17 16:40:22,628: DEBUG/MainProcess] | Consumer: New boot order: {Connection, Events, Mingle, Gossip, Tasks, Control, Agent, Heart, event loop}
 
 -------------- celery@laila v5.2.7 (dawn-chorus)
--- ***** ----- 
-- ******* ---- Linux-4.19.0-26-amd64-x86_64-with-glibc2.28 2024-04-17 16:40:22
- *** --- * --- 
- ** ---------- [config]
- ** ---------- .> app:         galaxy:0x7faa418fc190
- ** ---------- .> transport:   sqlalchemy+sqlite:////scratch/rico/tmp/tmp12w4107b/galaxy.sqlite
- ** ---------- .> results:     disabled://
- *** --- * --- .> concurrency: 2 (thread)
-- ******* ---- .> task events: OFF (enable -E to monitor tasks in this worker)
--- ***** ----- 
 -------------- [queues]
                .> celery           exchange=celery(direct) key=celery
                .> galaxy.external  exchange=galaxy.external(direct) key=galaxy.external
                .> galaxy.internal  exchange=galaxy.internal(direct) key=galaxy.internal

[tasks]
  . celery.accumulate
  . celery.backend_cleanup
  . celery.chain
  . celery.chord
  . celery.chord_unlock
  . celery.chunks
  . celery.group
  . celery.map
  . celery.starmap
  . galaxy.change_datatype
  . galaxy.cleanup_short_term_storage
  . galaxy.compute_dataset_hash
  . galaxy.export_history
  . galaxy.fetch_data
  . galaxy.finish_job
  . galaxy.import_data_bundle
  . galaxy.import_model_store
  . galaxy.materialize
  . galaxy.prepare_dataset_collection_download
  . galaxy.prepare_history_content_download
  . galaxy.prepare_history_download
  . galaxy.prepare_invocation_download
  . galaxy.prepare_pdf_download
  . galaxy.prune_history_audit_table
  . galaxy.purge_hda
  . galaxy.recalculate_user_disk_usage
  . galaxy.set_job_metadata
  . galaxy.set_metadata
  . galaxy.setup_fetch_data
  . galaxy.touch
  . galaxy.write_history_content_to
  . galaxy.write_history_to
  . galaxy.write_invocation_to

[2024-04-17 16:40:22,684: DEBUG/MainProcess] | Worker: Starting Pool
[2024-04-17 16:40:22,685: DEBUG/MainProcess] ^-- substep ok
[2024-04-17 16:40:22,685: DEBUG/MainProcess] | Worker: Starting Consumer
[2024-04-17 16:40:22,685: DEBUG/MainProcess] | Consumer: Starting Connection
[2024-04-17 16:40:22,691: INFO/MainProcess] Connected to sqlalchemy+sqlite:////scratch/rico/tmp/tmp12w4107b/galaxy.sqlite
[2024-04-17 16:40:22,692: DEBUG/MainProcess] ^-- substep ok
[2024-04-17 16:40:22,692: DEBUG/MainProcess] | Consumer: Starting Events
[2024-04-17 16:40:22,692: DEBUG/MainProcess] ^-- substep ok
[2024-04-17 16:40:22,692: DEBUG/MainProcess] | Consumer: Starting Tasks
[2024-04-17 16:40:22,773: DEBUG/MainProcess] ^-- substep ok
[2024-04-17 16:40:22,773: DEBUG/MainProcess] | Consumer: Starting Heart
[2024-04-17 16:40:22,773: DEBUG/MainProcess] ^-- substep ok
[2024-04-17 16:40:22,773: DEBUG/MainProcess] | Consumer: Starting event loop
[2024-04-17 16:40:22,773: INFO/MainProcess] celery@laila ready.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
DEBUG:galaxy.app:python path is: /scratch/rico/galaxy, /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/bin, /scratch/rico/galaxy/lib, /usr/local/lib/python38.zip, /usr/local/lib/python3.8, /usr/local/lib/python3.8/lib-dynload, /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages
DEBUG:galaxy.config:Configuration directory is /scratch/rico/tmp/tmp12w4107b
DEBUG:galaxy.config:Data directory is /scratch/rico/galaxy/database
DEBUG:galaxy.config:Managed config directory is /scratch/rico/tmp/tmp12w4107b
WARNING:galaxy.config:Option master_api_key has been deprecated in favor of bootstrap_admin_api_key
DEBUG:galaxy.config:No extra version JSON file detected at /scratch/rico/galaxy/version.json
INFO:alembic.runtime.migration:Context impl SQLiteImpl.
INFO:alembic.runtime.migration:Will assume non-transactional DDL.
INFO:alembic.runtime.migration:Running stamp_revision  -> caa7742f7bca
DEBUG:alembic.runtime.migration:new branch insert caa7742f7bca
INFO:alembic.runtime.migration:Context impl SQLiteImpl.
INFO:alembic.runtime.migration:Will assume non-transactional DDL.
INFO:alembic.runtime.migration:Running stamp_revision  -> d4a650f47a3c
DEBUG:alembic.runtime.migration:new branch insert d4a650f47a3c
INFO:galaxy.app:Install database targeting Galaxy's database configuration.
DEBUG:galaxy.web_stack:GunicornApplicationStack initialized
galaxy.jobs DEBUG 2024-04-17 16:40:31,417 [pN:main,p:100449,tN:MainThread] Loading job configuration from /scratch/rico/tmp/tmp12w4107b/job_conf.xml
galaxy.jobs DEBUG 2024-04-17 16:40:31,418 [pN:main,p:100449,tN:MainThread] Read job configuration from file: /scratch/rico/tmp/tmp12w4107b/job_conf.xml
galaxy.web_stack.handlers INFO 2024-04-17 16:40:31,426 [pN:main,p:100449,tN:MainThread] JobConfiguration: No job handler assignment method is set, defaulting to 'HANDLER_ASSIGNMENT_METHODS.DB_SKIP_LOCKED', set the `assign_with` attribute on <handlers> to override the default
galaxy.jobs INFO 2024-04-17 16:40:31,426 [pN:main,p:100449,tN:MainThread] Job handler assignment methods set to: db-skip-locked
galaxy.web_stack.handlers DEBUG 2024-04-17 16:40:31,426 [pN:main,p:100449,tN:MainThread] default set to child with id or tag 'planemo_dest'
galaxy.jobs DEBUG 2024-04-17 16:40:31,426 [pN:main,p:100449,tN:MainThread] Done loading job configuration
galaxy.security.vault WARNING 2024-04-17 16:40:32,451 [pN:main,p:100449,tN:MainThread] No vault configured. We recommend defining the vault_config_file setting in galaxy.yml
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,495 [pN:main,p:100449,tN:MainThread] Loading datatypes from /scratch/rico/galaxy/lib/galaxy/config/sample/datatypes_conf.xml.sample
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,496 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.h.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,496 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.c.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,496 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.cpp.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,496 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.py.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,497 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.go.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,497 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.rs.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,497 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.cs.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,497 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension hep.root.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,497 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:JP2 from the datatype registry for extension jp2.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,497 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Ab1 from the datatype registry for extension ab1.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,498 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.assembly:Amos from the datatype registry for extension afg.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,499 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.goldenpath:GoldenPath from the datatype registry for extension agp.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,500 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.anvio:AnvioComposite from the datatype registry for extension anvio_cog_profile.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,500 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.anvio:AnvioComposite from the datatype registry for extension anvio_composite.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,500 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Data from the datatype registry for extension anvio_classifier.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,500 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.anvio:AnvioContigsDB from the datatype registry for extension anvio_contigs_db.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,500 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.anvio:AnvioDB from the datatype registry for extension anvio_db.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,500 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.anvio:AnvioGenomesDB from the datatype registry for extension anvio_genomes_db.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,500 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.anvio:AnvioPanDB from the datatype registry for extension anvio_pan_db.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,501 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.anvio:AnvioComposite from the datatype registry for extension anvio_pfam_profile.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,501 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.anvio:AnvioProfileDB from the datatype registry for extension anvio_profile_db.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,501 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.anvio:AnvioSamplesDB from the datatype registry for extension anvio_samples_db.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,501 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension anvio_state.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,501 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.anvio:AnvioStructureDB from the datatype registry for extension anvio_structure_db.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,501 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:TSV from the datatype registry for extension anvio_variability.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,501 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Arff from the datatype registry for extension arff.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,501 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Paf from the datatype registry for extension paf.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,502 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Gfa1 from the datatype registry for extension gfa1.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,502 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Gfa2 from the datatype registry for extension gfa2.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,502 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:GenericAsn1 from the datatype registry for extension asn1.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,502 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:GenericAsn1Binary from the datatype registry for extension asn1-binary.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,502 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:Axt from the datatype registry for extension axt.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,502 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:FeatureLocationIndex from the datatype registry for extension fli.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,502 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Bam from the datatype registry for extension bam.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,502 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension bai.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,502 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:BamInputSorted from the datatype registry for extension qname_input_sorted.bam.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,503 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:BamQuerynameSorted from the datatype registry for extension qname_sorted.bam.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,503 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:BamNative from the datatype registry for extension unsorted.bam.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,503 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:ProBam from the datatype registry for extension probam.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,503 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:CRAM from the datatype registry for extension cram.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,503 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:Bed from the datatype registry for extension bed.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,503 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:BedGraph from the datatype registry for extension bedgraph.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,503 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:BedStrict from the datatype registry for extension bedstrict.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,503 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:Bed6 from the datatype registry for extension bed6.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,503 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:Bed12 from the datatype registry for extension bed12.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,504 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:ProBed from the datatype registry for extension probed.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,504 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.chrominfo:ChromInfo from the datatype registry for extension len.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,504 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:DAA from the datatype registry for extension daa.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,504 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RMA6 from the datatype registry for extension rma6.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,504 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:DMND from the datatype registry for extension dmnd.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,504 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Parquet from the datatype registry for extension parquet.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,504 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Idat from the datatype registry for extension idat.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,505 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:BigBed from the datatype registry for extension bigbed.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,505 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:BigWig from the datatype registry for extension bigwig.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,505 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension cxb.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,505 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:ChromatinInteractions from the datatype registry for extension chrint.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,505 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:CSV from the datatype registry for extension csv.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,505 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:TSV from the datatype registry for extension tsv.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,505 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:TSV from the datatype registry for extension intermine_tabular.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,505 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:CustomTrack from the datatype registry for extension customtrack.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,506 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.ngsindex:BowtieColorIndex from the datatype registry for extension bowtie_color_index.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,506 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.ngsindex:BowtieBaseIndex from the datatype registry for extension bowtie_base_index.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,506 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:csFasta from the datatype registry for extension csfasta.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,506 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Data from the datatype registry for extension data.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,507 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension gz.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,507 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension binary.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,507 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension d3_hierarchy.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,507 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:ImgtJson from the datatype registry for extension imgt.json.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,507 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:GeoJson from the datatype registry for extension geojson.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,507 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension data_manager_json.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,507 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:DotBracket from the datatype registry for extension dbn.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,507 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension fai.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,508 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:Fasta from the datatype registry for extension fasta.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,508 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:Fastg from the datatype registry for extension fastg.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,508 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:Fastq from the datatype registry for extension fastq.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,508 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:FastqSanger from the datatype registry for extension fastqsanger.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,508 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:FastqSolexa from the datatype registry for extension fastqsolexa.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,508 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:FastqCSSanger from the datatype registry for extension fastqcssanger.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,509 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:FastqIllumina from the datatype registry for extension fastqillumina.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,509 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:SequenceSplitLocations from the datatype registry for extension fqtoc.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,509 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Eland from the datatype registry for extension eland.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,509 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:ElandMulti from the datatype registry for extension elandmulti.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,509 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tracks:GeneTrack from the datatype registry for extension genetrack.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,509 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:Gff from the datatype registry for extension gff.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,509 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:Gff3 from the datatype registry for extension gff3.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,510 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Gif from the datatype registry for extension gif.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,510 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Gmaj from the datatype registry for extension gmaj.zip.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,510 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension graph_dot.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,510 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:Gtf from the datatype registry for extension gtf.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,510 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension toolshed.gz.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,510 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:H5 from the datatype registry for extension h5.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,510 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:H5 from the datatype registry for extension scool.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,510 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Grib from the datatype registry for extension grib.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,511 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Loom from the datatype registry for extension loom.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,511 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Anndata from the datatype registry for extension h5ad.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,511 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:H5 from the datatype registry for extension mz5.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,511 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension hyphy_results.json.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,511 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension hivtrace.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,511 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Cool from the datatype registry for extension cool.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,511 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:MCool from the datatype registry for extension mcool.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,511 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:H5MLM from the datatype registry for extension h5mlm.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,511 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:LudwigModel from the datatype registry for extension ludwig_model.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,511 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Html from the datatype registry for extension html.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,511 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Html from the datatype registry for extension ludwig_report.html.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,512 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:Interval from the datatype registry for extension interval.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,512 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension jellyfish.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,910 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.isa:IsaTab from the datatype registry for extension isa-tab.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,910 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.isa:IsaJson from the datatype registry for extension isa-json.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,910 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension picard_interval_list.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,910 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension gatk_interval.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,910 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension gatk_report.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,911 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension gatk_dbsnp.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,911 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension gatk_tranche.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,911 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension gatk_recal.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,912 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension hhr.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,912 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Jpg from the datatype registry for extension jpg.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,913 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension tiff.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,913 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension tf2.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,913 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension tf8.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,913 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension btf.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,913 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension tif.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,913 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension svs.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,914 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension scn.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,914 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension bif.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,914 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:OMETiff from the datatype registry for extension ome.tiff.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,914 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Hamamatsu from the datatype registry for extension vms.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,914 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Hamamatsu from the datatype registry for extension vmu.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,914 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Hamamatsu from the datatype registry for extension ndpi.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,914 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Mirax from the datatype registry for extension mrxs.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,914 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Sakura from the datatype registry for extension svslide.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,915 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Bmp from the datatype registry for extension bmp.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,915 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Im from the datatype registry for extension im.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,915 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Pcd from the datatype registry for extension pcd.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,915 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Pcx from the datatype registry for extension pcx.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,915 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Ppm from the datatype registry for extension ppm.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,915 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Psd from the datatype registry for extension psd.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,915 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Xbm from the datatype registry for extension xbm.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,915 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Xpm from the datatype registry for extension xpm.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,915 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Rgb from the datatype registry for extension rgb.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,916 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Pbm from the datatype registry for extension pbm.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,916 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Pgm from the datatype registry for extension pgm.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,916 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Nrrd from the datatype registry for extension nrrd.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,916 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Nrrd from the datatype registry for extension nhdr.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,916 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:RNADotPlotMatrix from the datatype registry for extension rna_eps.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,917 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.qiime2:QIIME2Artifact from the datatype registry for extension qza.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,917 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.qiime2:QIIME2Visualization from the datatype registry for extension qzv.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,917 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.qiime2:QIIME2Metadata from the datatype registry for extension qiime2.tabular.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,917 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:CompressedZipArchive from the datatype registry for extension zip.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,918 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:CompressedZipArchive from the datatype registry for extension ncbi_genome_dataset.zip.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,918 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension tar.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,918 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Directory from the datatype registry for extension directory.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,918 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Yaml from the datatype registry for extension yaml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,918 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension mrm.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,920 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:Dta from the datatype registry for extension dta.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,920 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:Dta2d from the datatype registry for extension dta2d.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,920 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:Edta from the datatype registry for extension edta.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,921 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:PepXml from the datatype registry for extension pepxml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,921 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:PepXml from the datatype registry for extension raw_pepxml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,921 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:PepXml from the datatype registry for extension peptideprophet_pepxml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,921 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:PepXml from the datatype registry for extension interprophet_pepxml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,921 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:ProtXML from the datatype registry for extension protxml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,921 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:ParamXml from the datatype registry for extension paramxml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,921 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:Kroenik from the datatype registry for extension kroenik.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,921 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:PepList from the datatype registry for extension peplist.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,921 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:PSMS from the datatype registry for extension psms.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,921 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:PepXmlReport from the datatype registry for extension pepxml.tsv.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,921 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:ProtXmlReport from the datatype registry for extension protxml.tsv.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,922 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:MascotDat from the datatype registry for extension mascotdat.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,922 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:MzIdentML from the datatype registry for extension mzid.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,922 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:IdXML from the datatype registry for extension idxml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,922 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:TandemXML from the datatype registry for extension tandem.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,922 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension sirius.ms.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,922 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:ThermoRAW from the datatype registry for extension thermo.raw.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,922 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:BafTar from the datatype registry for extension brukerbaf.d.tar.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,922 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:YepTar from the datatype registry for extension agilentbrukeryep.d.tar.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,922 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:TdfTar from the datatype registry for extension brukertdf.d.tar.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,922 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:MassHunterTar from the datatype registry for extension agilentmasshunter.d.tar.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,922 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:MassLynxTar from the datatype registry for extension watersmasslynx.raw.tar.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,922 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:WiffTar from the datatype registry for extension wiff.tar.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,922 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Wiff2Tar from the datatype registry for extension wiff2.tar.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,923 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:MascotXML from the datatype registry for extension mascotxml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,923 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:MzTab from the datatype registry for extension mztab.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,923 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:MzTab2 from the datatype registry for extension mztab2.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,923 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:MzML from the datatype registry for extension mzml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,923 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:NmrML from the datatype registry for extension nmrml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,923 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Meryldb from the datatype registry for extension meryldb.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,923 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Bref3 from the datatype registry for extension bref3.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,923 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:Mgf from the datatype registry for extension mgf.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,923 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:Wiff from the datatype registry for extension wiff.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,923 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:Wiff2 from the datatype registry for extension wiff2.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,923 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:MzXML from the datatype registry for extension mzxml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,923 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:MzData from the datatype registry for extension mzdata.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,923 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:Ms2 from the datatype registry for extension ms2.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,924 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:MzQuantML from the datatype registry for extension mzq.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,924 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:SQlite from the datatype registry for extension sqlite.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,924 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:MzSQlite from the datatype registry for extension mz.sqlite.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,924 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:OSW from the datatype registry for extension osw.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,924 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:PQP from the datatype registry for extension pqp.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,924 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:TraML from the datatype registry for extension traml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,924 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:TrafoXML from the datatype registry for extension trafoxml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,924 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:FeatureXML from the datatype registry for extension featurexml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,924 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:ConsensusXML from the datatype registry for extension consensusxml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,924 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:UniProtXML from the datatype registry for extension uniprotxml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,924 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:XquestXML from the datatype registry for extension xquest.xml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,924 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:XquestSpecXML from the datatype registry for extension spec.xml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,924 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:QCML from the datatype registry for extension qcml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,925 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension mzqc.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,925 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:Msp from the datatype registry for extension msp.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,925 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:SPLibNoIndex from the datatype registry for extension splib_noindex.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,925 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:SPLib from the datatype registry for extension splib.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,925 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:BlibSQlite from the datatype registry for extension blib.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,925 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:DlibSQlite from the datatype registry for extension dlib.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,925 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:ElibSQlite from the datatype registry for extension elib.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,925 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:XHunterAslFormat from the datatype registry for extension hlf.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,925 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:IdpDB from the datatype registry for extension idpdb.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,925 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:Sf3 from the datatype registry for extension sf3.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,925 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension cps.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,925 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:ConnectivityTable from the datatype registry for extension ct.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,926 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:PostgresqlArchive from the datatype registry for extension postgresql.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,926 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:SearchGuiArchive from the datatype registry for extension searchgui_archive.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,926 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Fast5Archive from the datatype registry for extension fast5.tar.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,926 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Fast5ArchiveGz from the datatype registry for extension fast5.tar.gz.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,926 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Fast5ArchiveBz2 from the datatype registry for extension fast5.tar.bz2.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,926 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension peptideshaker_archive.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,926 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension percin.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,926 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.xml:GenericXml from the datatype registry for extension percout.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,926 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension hardklor.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,927 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension kronik.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,927 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:ImzML from the datatype registry for extension imzml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,927 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Analyze75 from the datatype registry for extension analyze75.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,927 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Nifti1 from the datatype registry for extension nii1.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,927 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Nifti2 from the datatype registry for extension nii2.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,927 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Gifti from the datatype registry for extension gii.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,927 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Tck from the datatype registry for extension tck.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,927 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Trk from the datatype registry for extension trk.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,927 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Mrc2014 from the datatype registry for extension mrc.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,928 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Star from the datatype registry for extension star.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,928 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.proteomics:PEFF from the datatype registry for extension peff.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,928 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension toml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,928 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.flow:FCS from the datatype registry for extension fcs.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,928 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowtext.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,928 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowclr.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,928 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowmfi.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,929 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowstat1.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,929 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowstat2.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,929 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowstat3.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,929 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowscore.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,929 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension flowframe.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,929 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension fsom.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,929 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension flowset.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,929 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension metacyto_clr.txt.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,930 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.metacyto:mSummary from the datatype registry for extension metacyto_summary.txt.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,930 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.metacyto:mStats from the datatype registry for extension metacyto_stats.txt.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,930 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension deeptools_compute_matrix_archive.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,930 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension deeptools_coverage_matrix.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,930 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:NetCDF from the datatype registry for extension netcdf.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,930 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Eps from the datatype registry for extension eps.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,931 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Rast from the datatype registry for extension rast.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,931 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Laj from the datatype registry for extension laj.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,931 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:Lav from the datatype registry for extension lav.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,931 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:Maf from the datatype registry for extension maf.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,931 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:MafCustomTrack from the datatype registry for extension mafcustomtrack.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,931 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:MatrixMarket from the datatype registry for extension mtx.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,931 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:CMAP from the datatype registry for extension cmap.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,931 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:ENCODEPeak from the datatype registry for extension encodepeak.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,931 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Pdf from the datatype registry for extension pdf.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,931 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Pileup from the datatype registry for extension pileup.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,931 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Psl from the datatype registry for extension psl.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,931 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Obo from the datatype registry for extension obo.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,932 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.xml:Owl from the datatype registry for extension owl.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,932 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.images:Png from the datatype registry for extension png.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,932 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScore from the datatype registry for extension qual.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,932 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScoreSolexa from the datatype registry for extension qualsolexa.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,932 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScoreIllumina from the datatype registry for extension qualillumina.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,932 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScoreSOLiD from the datatype registry for extension qualsolid.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,932 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScore454 from the datatype registry for extension qual454.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,932 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.assembly:Roadmaps from the datatype registry for extension roadmaps.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,932 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Sam from the datatype registry for extension sam.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,932 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Scf from the datatype registry for extension scf.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,932 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.assembly:Sequences from the datatype registry for extension sequences.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,932 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:SnpEffDb from the datatype registry for extension snpeffdb.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,933 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:SnpSiftDbNSFP from the datatype registry for extension snpsiftdbnsfp.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,933 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension dbnsfp.tabular.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,933 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Sff from the datatype registry for extension sff.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,933 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Sra from the datatype registry for extension sra.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,933 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:SraManifest from the datatype registry for extension sra_manifest.tabular.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,933 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.xml:GenericXml from the datatype registry for extension svg.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,933 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Taxonomy from the datatype registry for extension taxonomy.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,933 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension tabular.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,933 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:TwoBit from the datatype registry for extension twobit.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,934 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:SQmass from the datatype registry for extension sqmass.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,934 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:GeminiSQLite from the datatype registry for extension gemini.sqlite.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,934 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:ChiraSQLite from the datatype registry for extension chira.sqlite.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,934 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:CuffDiffSQlite from the datatype registry for extension cuffdiff.sqlite.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,934 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:GAFASQLite from the datatype registry for extension gafa.sqlite.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,934 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:NcbiTaxonomySQlite from the datatype registry for extension ncbitaxonomy.sqlite.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,934 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension txt.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,934 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:LineCount from the datatype registry for extension linecount.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,934 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:MemePsp from the datatype registry for extension memepsp.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,934 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.xml:MEMEXml from the datatype registry for extension memexml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,934 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.xml:CisML from the datatype registry for extension cisml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,934 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.xml:GenericXml from the datatype registry for extension xml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,934 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.xml:GenericXml from the datatype registry for extension xsd.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,935 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.xml:Dzi from the datatype registry for extension dzi.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,935 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Vcf from the datatype registry for extension vcf.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,935 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Bcf from the datatype registry for extension bcf.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,935 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Bcf from the datatype registry for extension bcf_bgzip.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,935 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:BcfUncompressed from the datatype registry for extension bcf_uncompressed.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,935 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.assembly:Velvet from the datatype registry for extension velvet.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,935 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:Wiggle from the datatype registry for extension wig.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,935 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension interval_index.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,935 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension odgi.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,936 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension vg.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,936 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension xg.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,936 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension protobuf2.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,936 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension protobuf3.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,936 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension onnx.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,936 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension tabix.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,936 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:IntervalTabix from the datatype registry for extension interval_tabix.gz.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,936 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:JuicerMediumTabix from the datatype registry for extension juicer_medium_tabix.gz.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,936 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:BedTabix from the datatype registry for extension bed_tabix.gz.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,936 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:GffTabix from the datatype registry for extension gff_tabix.gz.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,937 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension bgzip.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,937 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:VcfGz from the datatype registry for extension vcf_bgzip.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,937 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension bus.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,937 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension kallisto.idx.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,937 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.xml:Phyloxml from the datatype registry for extension phyloxml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,937 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Newick from the datatype registry for extension newick.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,937 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Newick from the datatype registry for extension nhx.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,937 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Nexus from the datatype registry for extension nex.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,937 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:IQTree from the datatype registry for extension iqtree.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,939 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:SquareDistanceMatrix from the datatype registry for extension mldist.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,941 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Affybatch from the datatype registry for extension affybatch.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,942 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Eigenstratgeno from the datatype registry for extension eigenstratgeno.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,942 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Eigenstratpca from the datatype registry for extension eigenstratpca.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,942 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Eset from the datatype registry for extension eset.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,942 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Fped from the datatype registry for extension fped.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,942 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Fphe from the datatype registry for extension fphe.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,942 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:GenomeGraphs from the datatype registry for extension gg.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,942 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:ldIndep from the datatype registry for extension ldindep.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,942 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:MAlist from the datatype registry for extension malist.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,942 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Lped from the datatype registry for extension lped.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,942 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Pbed from the datatype registry for extension pbed.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,943 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Pheno from the datatype registry for extension pheno.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,943 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Pphe from the datatype registry for extension pphe.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,943 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:RexpBase from the datatype registry for extension rexpbase.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,943 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Rgenetics from the datatype registry for extension rgenetics.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,943 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:Snptest from the datatype registry for extension snptest.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,943 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:SNPMatrix from the datatype registry for extension snpmatrix.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,943 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:ExcelXls from the datatype registry for extension xls.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,943 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Ipynb from the datatype registry for extension ipynb.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,943 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension json.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,943 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:ExpressionJson from the datatype registry for extension expression.json.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,944 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.graph:Xgmml from the datatype registry for extension xgmml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,944 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.graph:Sif from the datatype registry for extension sif.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,945 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.triples:Triples from the datatype registry for extension triples.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,945 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.triples:HDT from the datatype registry for extension hdt.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,946 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.triples:NTriples from the datatype registry for extension nt.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,946 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.triples:N3 from the datatype registry for extension n3.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,946 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.triples:Turtle from the datatype registry for extension ttl.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,946 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.triples:Rdf from the datatype registry for extension rdf.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,946 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.triples:Jsonld from the datatype registry for extension jsonld.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,946 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:ExcelXls from the datatype registry for extension excel.xls.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,946 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Xlsx from the datatype registry for extension xlsx.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,946 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension btwisted.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,946 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cai.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,946 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cat_db.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,946 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension charge.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,946 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension checktrans.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,947 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension chips.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,947 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension codcmp.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,947 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension coderet.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,947 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension compseq.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,947 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cpgplot.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,947 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cpgreport.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,947 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cusp.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,947 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cut.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,947 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension dan.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,947 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension digest.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,948 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension dreg.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,948 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension einverted.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,948 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension epestfind.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,948 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension equicktandem.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,948 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension est2genome.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,948 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension etandem.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,948 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension freak.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,948 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension fuzznuc.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,948 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension fuzzpro.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,948 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension fuzztran.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,948 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension garnier.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,949 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension geecee.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,949 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension helixturnhelix.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,949 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension hmoment.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,949 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension isochore.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,949 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension match.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,949 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension nametable.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,949 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension needle.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,949 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension newcpgreport.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,949 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension newcpgseek.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,949 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension noreturn.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,950 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension palindrome.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,950 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pepcoil.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,950 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pepinfo.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,950 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pepstats.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,950 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension polydot.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,950 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension preg.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,950 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension prettyseq.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,950 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension primersearch.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,950 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension showfeat.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,950 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension showorf.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,950 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension sixpack.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,951 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension strider.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,951 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension supermatcher.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,951 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension syco.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,951 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension textsearch.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,951 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension vectorstrip.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,951 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension wobble.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,951 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension wordcount.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,951 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension dbmotif.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,951 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension diffseq.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,951 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension excel.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,951 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension feattable.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,952 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension motif.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,952 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension regions.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,952 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension seqtable.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,952 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension simple.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,952 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension table.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,952 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension tagseq.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,952 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension acedb.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,952 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension clustal.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,952 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension codata.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,952 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension embl.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,953 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension fitch.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,953 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension gcg.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,953 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:Genbank from the datatype registry for extension genbank.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,953 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension hennig86.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,953 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension ig.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,953 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension jackknifer.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,953 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension jackknifernon.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,953 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension mega.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,953 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension meganon.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,954 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension ncbi.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,954 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension nexus.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,954 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension nexusnon.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,954 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.phylip:Phylip from the datatype registry for extension phylip.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,954 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension phylipnon.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,954 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pir.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,954 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension staden.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,954 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension swiss.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,955 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.msa:Msf from the datatype registry for extension msf.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,956 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx0.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,956 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx1.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,956 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx10.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,956 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx2.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,956 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx3.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,956 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pair.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,956 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension score.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,956 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension srs.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,956 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension srspair.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,957 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.annotation:SnapHmm from the datatype registry for extension snaphmm.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,957 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.annotation:Augustus from the datatype registry for extension augustus.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,957 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:ICM from the datatype registry for extension icm.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,957 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.msa:InfernalCM from the datatype registry for extension cm.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,957 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.msa:Hmmer2 from the datatype registry for extension hmm2.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,957 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.msa:Hmmer3 from the datatype registry for extension hmm3.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,957 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.msa:Stockholm_1_0 from the datatype registry for extension stockholm.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,957 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.msa:MauveXmfa from the datatype registry for extension xmfa.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,958 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.microarrays:Cel from the datatype registry for extension cel.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,958 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.microarrays:Gpr from the datatype registry for extension gpr.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,958 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.microarrays:Gal from the datatype registry for extension gal.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,958 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension rds.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,958 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension phyloseq.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,958 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,959 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.sce.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,959 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.raw.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,959 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.msnbase.raw.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,959 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.findchrompeaks.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,959 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.group.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,959 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.retcor.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,959 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.fillpeaks.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,959 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.camera.positive.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,959 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.camera.negative.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,960 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.camera.quick.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,960 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.hdf5:HDF5SummarizedExperiment from the datatype registry for extension rdata.se.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,960 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension rdock_as.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,960 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:OxliCountGraph from the datatype registry for extension oxlicg.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,960 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:OxliNodeGraph from the datatype registry for extension oxling.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,960 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:OxliTagSet from the datatype registry for extension oxlits.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,960 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:OxliStopTags from the datatype registry for extension oxlist.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,960 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:OxliSubset from the datatype registry for extension oxliss.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,961 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:OxliGraphLabels from the datatype registry for extension oxligl.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,963 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:STL from the datatype registry for extension stl.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,963 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:PlyAscii from the datatype registry for extension plyascii.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,963 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:PlyBinary from the datatype registry for extension plybinary.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,963 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:VtkAscii from the datatype registry for extension vtkascii.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,963 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:VtkBinary from the datatype registry for extension vtkbinary.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,963 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Biom1 from the datatype registry for extension biom1.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,963 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Biom2 from the datatype registry for extension biom2.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,963 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:MashSketch from the datatype registry for extension msh.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:32,963 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.interval:ScIdx from the datatype registry for extension scidx.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,152 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:SMILES from the datatype registry for extension smi.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,152 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:SDF from the datatype registry for extension sdf.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,152 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:InChI from the datatype registry for extension inchi.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,152 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:MOL from the datatype registry for extension mol.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,152 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:MOL2 from the datatype registry for extension mol2.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,152 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:CML from the datatype registry for extension cml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,152 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:FPS from the datatype registry for extension fps.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,153 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:OBFS from the datatype registry for extension obfs.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,153 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:DRF from the datatype registry for extension drf.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,153 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:PHAR from the datatype registry for extension phar.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,153 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:PDB from the datatype registry for extension pdb.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,153 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:PDBQT from the datatype registry for extension pdbqt.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,153 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:PQR from the datatype registry for extension pqr.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,153 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:Cell from the datatype registry for extension cell.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,153 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:CIF from the datatype registry for extension cif.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,153 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:XYZ from the datatype registry for extension xyz.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,153 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:ExtendedXYZ from the datatype registry for extension extxyz.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,153 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Trr from the datatype registry for extension trr.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,153 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Dcd from the datatype registry for extension dcd.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,154 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension top.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,154 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension prmtop.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,154 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension itp.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,154 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension mdp.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,154 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension ndx.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,154 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension xvg.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,154 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Xtc from the datatype registry for extension xtc.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,154 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Cpt from the datatype registry for extension cpt.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,154 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Edr from the datatype registry for extension edr.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,155 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension tpr.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,155 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:GRO from the datatype registry for extension gro.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,155 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension inpcrd.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,155 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Vel from the datatype registry for extension vel.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,155 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:grd from the datatype registry for extension grd.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,155 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.molecules:grdtgz from the datatype registry for extension grd.tgz.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,155 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Otu from the datatype registry for extension mothur.otu.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,155 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Otu from the datatype registry for extension mothur.list.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,155 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Sabund from the datatype registry for extension mothur.sabund.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,155 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Sabund from the datatype registry for extension mothur.rabund.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,155 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:GroupAbund from the datatype registry for extension mothur.shared.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,156 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:GroupAbund from the datatype registry for extension mothur.relabund.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,156 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Names from the datatype registry for extension mothur.names.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,156 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Group from the datatype registry for extension mothur.design.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,156 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Summary from the datatype registry for extension mothur.summary.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,156 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Group from the datatype registry for extension mothur.groups.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,156 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Oligos from the datatype registry for extension mothur.oligos.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,156 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.sequence:Fasta from the datatype registry for extension mothur.align.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,156 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:AccNos from the datatype registry for extension mothur.accnos.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,156 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:AccNos from the datatype registry for extension mothur.otulabels.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,156 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension mothur.otu.corr.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,156 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:SecondaryStructureMap from the datatype registry for extension mothur.map.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,157 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:AlignCheck from the datatype registry for extension mothur.align.check.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,157 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:AlignReport from the datatype registry for extension mothur.align.report.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,157 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:LaneMask from the datatype registry for extension mothur.filter.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,157 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:DistanceMatrix from the datatype registry for extension mothur.dist.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,157 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension mothur.tre.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,157 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:PairwiseDistanceMatrix from the datatype registry for extension mothur.pair.dist.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,157 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:SquareDistanceMatrix from the datatype registry for extension mothur.square.dist.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,157 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:LowerTriangleDistanceMatrix from the datatype registry for extension mothur.lower.dist.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,157 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:RefTaxonomy from the datatype registry for extension mothur.ref.taxonomy.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,157 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:RefTaxonomy from the datatype registry for extension mothur.seq.taxonomy.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,158 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:RefTaxonomy from the datatype registry for extension mothur.rdp.taxonomy.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,158 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:ConsensusTaxonomy from the datatype registry for extension mothur.cons.taxonomy.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,158 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:TaxonomySummary from the datatype registry for extension mothur.tax.summary.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,158 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Frequency from the datatype registry for extension mothur.freq.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,158 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Quantile from the datatype registry for extension mothur.quan.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,158 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Quantile from the datatype registry for extension mothur.filtered.quan.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,158 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Quantile from the datatype registry for extension mothur.masked.quan.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,158 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Quantile from the datatype registry for extension mothur.filtered.masked.quan.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,158 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:Axes from the datatype registry for extension mothur.axes.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,158 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:SffFlow from the datatype registry for extension mothur.sff.flow.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,158 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.mothur:CountTable from the datatype registry for extension mothur.count_table.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,159 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.neo4j:Neo4jDB from the datatype registry for extension neostore.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,159 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.neo4j:Neo4jDBzip from the datatype registry for extension neostore.zip.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,159 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tracks:UCSCTrackHub from the datatype registry for extension trackhub.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,160 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.blast:BlastXml from the datatype registry for extension blastxml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,160 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.blast:BlastNucDb from the datatype registry for extension blastdbn.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,160 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.blast:BlastProtDb from the datatype registry for extension blastdbp.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,161 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.blast:BlastDomainDb from the datatype registry for extension blastdbd.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,161 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.blast:LastDb from the datatype registry for extension lastdb.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,161 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.blast:BlastNucDb5 from the datatype registry for extension blastdbn5.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,161 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.blast:BlastProtDb5 from the datatype registry for extension blastdbp5.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,161 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.blast:BlastDomainDb5 from the datatype registry for extension blastdbd5.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,161 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:GenericAsn1 from the datatype registry for extension maskinfo-asn1.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,161 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:GenericAsn1Binary from the datatype registry for extension maskinfo-asn1-binary.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,161 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:GenericAsn1 from the datatype registry for extension pssm-asn1.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,162 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.plant_tribes:PlantTribesKsComponents from the datatype registry for extension ptkscmp.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,162 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.plant_tribes:Smat from the datatype registry for extension smat.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,162 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:GenotypeMatrix from the datatype registry for extension alohomora_gts.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,162 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension alohomora_map.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,162 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension alohomora_maf.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,162 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension alohomora_ped.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,162 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension linkage_pedin.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,163 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:DataIn from the datatype registry for extension linkage_datain.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,163 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:MarkerMap from the datatype registry for extension linkage_map.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,163 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension allegro_ihaplo.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,163 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension allegro_descent.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,163 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:AllegroLOD from the datatype registry for extension allegro_fparam.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,163 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.genetics:IdeasPre from the datatype registry for extension ideaspre.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,163 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.xml:Sbml from the datatype registry for extension sbml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,164 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.spaln:SpalnNuclDb from the datatype registry for extension spalndbnp.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,164 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.spaln:SpalnProtDb from the datatype registry for extension spalndba.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,164 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension dada2_dada.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,164 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension dada2_errorrates.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,164 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension dada2_mergepairs.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,164 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension dada2_sequencetable.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,164 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension dada2_uniques.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,164 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension ampvis2.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,165 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension ckpt.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,165 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension tgz.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,167 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.media:Wav from the datatype registry for extension wav.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,167 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.media:Mp3 from the datatype registry for extension mp3.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,167 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.media:Mkv from the datatype registry for extension mkv.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,167 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.media:Mp4 from the datatype registry for extension mp4.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,168 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.media:Flv from the datatype registry for extension flv.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,168 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.media:Mpg from the datatype registry for extension mpg.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,168 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.speech:TextGrid from the datatype registry for extension textgrid.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,168 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.speech:BPF from the datatype registry for extension par.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,168 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension ffindex.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,168 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Data from the datatype registry for extension ffdata.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,168 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Pretext from the datatype registry for extension pretext.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,169 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Html from the datatype registry for extension immuneml_receptors.html.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,169 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:HexrdMaterials from the datatype registry for extension hexrd.materials.h5.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,169 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Npz from the datatype registry for extension npz.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,169 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:HexrdImagesNpz from the datatype registry for extension hexrd.images.npz.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,169 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:HexrdEtaOmeNpz from the datatype registry for extension hexrd.eta_ome.npz.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,169 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Npz from the datatype registry for extension hexrd.scored_orientations.npz.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,169 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension hexrd.accepted_orientations.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,169 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Yaml from the datatype registry for extension hexrd.yml.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,169 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperTess from the datatype registry for extension neper.tess.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,169 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperTesr from the datatype registry for extension neper.tesr.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,170 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperPoints from the datatype registry for extension neper.points.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,170 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperPointsTabular from the datatype registry for extension neper.points.tsv.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,170 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperMultiScaleCell from the datatype registry for extension neper.mscell.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,170 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:GmshMsh from the datatype registry for extension gmsh.msh.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,170 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:GmshGeo from the datatype registry for extension gmsh.geo.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,170 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:ZsetGeof from the datatype registry for extension zset.geof.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,170 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Text from the datatype registry for extension pov.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,170 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:PithyaResult from the datatype registry for extension pithya.result.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,170 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:PithyaProperty from the datatype registry for extension pithya.property.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,170 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:PithyaModel from the datatype registry for extension pithya.model.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,170 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:BCSLts from the datatype registry for extension bcsl.ts.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,171 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:BCSLmodel from the datatype registry for extension bcsl.model.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,171 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:StormSample from the datatype registry for extension storm.sample.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,171 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:StormCheck from the datatype registry for extension storm.check.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,171 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:CTLresult from the datatype registry for extension ctl.result.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,171 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Castep from the datatype registry for extension castep.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,171 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:Param from the datatype registry for extension param.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,171 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.text:FormattedDensity from the datatype registry for extension den_fmt.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,171 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension bil.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,171 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension hdr.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,172 [pN:main,p:100449,tN:MainThread] Retrieved datatype module galaxy.datatypes.gis:Shapefile from the datatype registry for extension shp.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,172 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.plant_tribes:PlantTribesKsComponents'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,172 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.plant_tribes:Smat'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,172 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Sabund'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,172 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Otu'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,172 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:GroupAbund'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,172 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:SecondaryStructureMap'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,172 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:LowerTriangleDistanceMatrix'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,172 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:SquareDistanceMatrix'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,172 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:PairwiseDistanceMatrix'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,172 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Oligos'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,172 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Quantile'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,172 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Frequency'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,172 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:LaneMask'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,172 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:RefTaxonomy'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,172 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Axes'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,172 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:PlyAscii'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,172 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:PlyBinary'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:VtkAscii'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:VtkBinary'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:NeperTess'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:NeperTesr'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:GmshMsh'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.goldenpath:GoldenPath'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.interval:ScIdx'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.tabular:Vcf'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:JP2'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:TwoBit'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:GeminiSQLite'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:SQmass'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:MzSQlite'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:OSW'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:PQP'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:IdpDB'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:ElibSQlite'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:DlibSQlite'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:BlibSQlite'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:ChiraSQLite'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:CuffDiffSQlite'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:GAFASQLite'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:NcbiTaxonomySQlite'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,173 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:SQlite'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,174 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:H5MLM'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,174 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Cool'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,174 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:MCool'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,174 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Loom'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,174 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Anndata'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,174 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Biom2'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,174 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:HexrdMaterials'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,174 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:H5'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,174 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Grib'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,174 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:HexrdImagesNpz'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,174 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:HexrdEtaOmeNpz'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,174 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Npz'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,174 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Bam'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,174 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:BamQuerynameSorted'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,174 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:BamNative'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,174 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:CRAM'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,174 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Sff'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,174 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Sra'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,174 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:NetCDF'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,174 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:DAA'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,174 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:RMA6'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,175 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:DMND'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,175 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Parquet'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,175 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:BafTar'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,175 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:TdfTar'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,175 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:MassHunterTar'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,175 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:MassLynxTar'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,175 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:YepTar'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,175 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:WiffTar'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,175 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Fast5ArchiveGz'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,175 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Fast5ArchiveBz2'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,175 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Fast5Archive'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,175 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Meryldb'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,175 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Bref3'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,175 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:PostgresqlArchive'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,175 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:ICM'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,175 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Idat'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,175 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Trr'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,175 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Dcd'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,175 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Xtc'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,175 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Cpt'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,175 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Edr'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,175 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Vel'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,176 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Xlsx'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,176 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.qiime2:QIIME2Metadata'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,176 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.qiime2:QIIME2Artifact'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,176 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.qiime2:QIIME2Visualization'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,176 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:CompressedZipArchive'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,176 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:Pretext'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,176 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.annotation:Augustus'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,176 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.xml:Owl'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,176 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.triples:Rdf'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,176 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.blast:BlastXml'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,176 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Gifti'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,176 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.xml:Phyloxml'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,176 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.xml:Dzi'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,176 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.xml:Sbml'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,176 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Dta2d'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,176 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Edta'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,176 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:ConsensusXML'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,176 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:IdXML'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,176 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:FeatureXML'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,176 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MascotXML'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,177 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Mgf'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,177 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Ms2'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,177 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Msp'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,177 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzData'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,177 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzIdentML'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,177 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzML'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,177 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzQuantML'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,177 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzTab'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,177 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzTab2'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,177 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:ParamXml'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,177 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzXML'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,177 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:NmrML'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,177 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Kroenik'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,177 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:PepList'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,177 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:PSMS'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,177 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:PepXml'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,177 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:ProtXML'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,177 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:SPLib'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,177 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:TandemXML'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,178 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:ThermoRAW'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,178 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:TraML'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,178 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:TrafoXML'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,178 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:UniProtXML'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,178 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:XquestXML'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,178 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:XquestSpecXML'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,178 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:QCML'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,178 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Wiff'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,178 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:PEFF'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,178 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:CML'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,178 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.xml:GenericXml'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,178 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.triples:HDT'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,178 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.triples:Turtle'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,178 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.triples:NTriples'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,178 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.triples:Jsonld'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,178 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Maf'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,178 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Lav'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,178 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:MemePsp'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,179 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Fastg'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,179 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:csFasta'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,179 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.qualityscore:QualityScoreSOLiD'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,179 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.qualityscore:QualityScore454'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,179 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:SDF'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,179 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:PDB'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,179 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:Cell'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,179 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:CIF'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,179 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:ExtendedXYZ'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,179 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:XYZ'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,179 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:MOL2'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,179 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:InChI'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,179 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:FPS'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,179 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:PQR'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,179 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.molecules:GRO'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,179 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.phylip:Phylip'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,179 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Fasta'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,179 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:FastqCSSanger'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,180 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:FastqSanger'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,180 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Fastq'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,180 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.interval:Wiggle'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,180 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:Html'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,180 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Pdf'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,180 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Axt'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,180 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Genbank'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,180 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.interval:Bed'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,180 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.interval:CustomTrack'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,180 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.interval:Gtf'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,180 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.interval:Gff'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,180 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.interval:Gff3'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,180 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.tabular:Pileup'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,180 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.tabular:Psl'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,180 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:Paf'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,181 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.interval:Interval'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,181 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.tabular:Sam'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,181 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.data:Newick'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,181 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.data:Nexus'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,181 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:IQTree'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,181 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:Obo'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,181 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:Arff'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,181 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:Ipynb'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,181 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:Biom1'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,181 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:ImgtJson'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,181 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:GeoJson'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,181 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:PithyaResult'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,181 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:BCSLts'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,181 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:Json'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,181 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.genetics:GenotypeMatrix'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,182 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.genetics:DataIn'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,182 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.genetics:MarkerMap'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,182 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.genetics:AllegroLOD'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,182 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:RNADotPlotMatrix'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,182 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.sequence:DotBracket'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,182 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.tabular:CMAP'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,182 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.tabular:ConnectivityTable'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,182 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.tabular:CSV'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,182 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.metacyto:mSummary'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,182 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.metacyto:mStats'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,182 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.tabular:TSV'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,182 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.tabular:MatrixMarket'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,182 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.msa:Hmmer2'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,182 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.msa:Hmmer3'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,182 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.msa:Stockholm_1_0'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,183 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.msa:MauveXmfa'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,183 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.msa:InfernalCM'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,183 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.annotation:SnapHmm'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,183 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.microarrays:Cel'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,183 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.microarrays:Gpr'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,183 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.microarrays:Gal'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,183 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:RData'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,183 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:RDS'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,183 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Mrc2014'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,183 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Jpg'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,183 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Png'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,183 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:OMETiff'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,183 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Tiff'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,183 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Bmp'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,183 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Gif'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,184 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Im'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,184 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Pcd'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,184 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Pcx'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,184 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Ppm'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,184 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Psd'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,184 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Xbm'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,184 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Rgb'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,184 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Pbm'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,184 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Pgm'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,184 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Xpm'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,184 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Eps'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,184 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Rast'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,184 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Tck'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,184 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Trk'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,185 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Nifti1'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,185 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Nifti2'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,185 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.images:Star'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,185 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.media:Wav'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,185 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.media:Mkv'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,185 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.media:Mp3'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,185 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.media:Mp4'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,185 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.media:Flv'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,185 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.media:Mpg'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,185 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.speech:TextGrid'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,185 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.speech:BPF'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,185 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:Castep'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,185 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:CTLresult'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,185 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:FormattedDensity'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,186 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:Param'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,186 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:Yaml'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,186 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliCountGraph'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,186 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliNodeGraph'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,186 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliTagSet'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,186 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliStopTags'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,186 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliSubset'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,186 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliGraphLabels'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,186 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.neo4j:Neo4jDBzip'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,186 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:PithyaProperty'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,186 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:PithyaModel'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,186 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:BCSLmodel'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,186 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:StormSample'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,186 [pN:main,p:100449,tN:MainThread] Loaded sniffer for datatype 'galaxy.datatypes.text:StormCheck'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,191 [pN:main,p:100449,tN:MainThread] Build site file [tool-data/shared/ucsc/ucsc_build_sites.txt] not found using sample [tool-data/shared/ucsc/ucsc_build_sites.txt.sample].
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,191 [pN:main,p:100449,tN:MainThread] Loaded build site 'ucsc': tool-data/shared/ucsc/ucsc_build_sites.txt.sample with display sites: ['main', 'test', 'archaea', 'ucla']
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,191 [pN:main,p:100449,tN:MainThread] Loaded build site 'gbrowse': tool-data/shared/gbrowse/gbrowse_build_sites.txt with display sites: ['modencode', 'sgd_yeast', 'tair', 'wormbase', 'wormbase_ws120', 'wormbase_ws140', 'wormbase_ws170', 'wormbase_ws180', 'wormbase_ws190', 'wormbase_ws200', 'wormbase_ws204', 'wormbase_ws210', 'wormbase_ws220', 'wormbase_ws225']
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,191 [pN:main,p:100449,tN:MainThread] Loaded build site 'ensembl': tool-data/shared/ensembl/ensembl_sites.txt
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,191 [pN:main,p:100449,tN:MainThread] Loaded build site 'ensembl_data_url': tool-data/shared/ensembl/ensembl_sites_data_URL.txt
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,191 [pN:main,p:100449,tN:MainThread] Build site file [tool-data/shared/igv/igv_build_sites.txt] not found using sample [tool-data/shared/igv/igv_build_sites.txt.sample].
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,191 [pN:main,p:100449,tN:MainThread] Loaded build site 'igv': tool-data/shared/igv/igv_build_sites.txt.sample
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,191 [pN:main,p:100449,tN:MainThread] Build site file [tool-data/shared/rviewer/rviewer_build_sites.txt] not found using sample [tool-data/shared/rviewer/rviewer_build_sites.txt.sample].
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,192 [pN:main,p:100449,tN:MainThread] Loaded build site 'rviewer': tool-data/shared/rviewer/rviewer_build_sites.txt.sample
galaxy.util.tool_shed.tool_shed_registry DEBUG 2024-04-17 16:40:33,192 [pN:main,p:100449,tN:MainThread] Loading references to tool sheds from /scratch/rico/tmp/tmp12w4107b/tool_sheds_conf.xml
galaxy.util.tool_shed.tool_shed_registry DEBUG 2024-04-17 16:40:33,192 [pN:main,p:100449,tN:MainThread] Loaded reference to tool shed: Target Shed
galaxy.queue_worker INFO 2024-04-17 16:40:33,193 [pN:main,p:100449,tN:MainThread] Initializing main Galaxy Queue Worker on sqlalchemy+sqlite:////scratch/rico/tmp/tmp12w4107b/galaxy.sqlite?isolation_level=IMMEDIATE
galaxy.visualization.genomes ERROR 2024-04-17 16:40:33,209 [pN:main,p:100449,tN:MainThread] Error reading twobit.loc
Traceback (most recent call last):
  File "/scratch/rico/galaxy/lib/galaxy/visualization/genomes.py", line 218, in reload_genomes
    with open(twobit_path) as f:
FileNotFoundError: [Errno 2] No such file or directory: '/scratch/rico/galaxy/tool-data/twobit.loc'
galaxy.util WARNING 2024-04-17 16:40:33,252 [pN:main,p:100449,tN:MainThread] directory not found: /scratch/rico/galaxy/lib/galaxy/util/../../../config/plugins/activities
galaxy.tools WARNING 2024-04-17 16:40:33,252 [pN:main,p:100449,tN:MainThread] The default shed tool config file (/scratch/rico/tmp/tmp12w4107b/shed_tool_conf.xml) has been added to the tool_config_file option, if this is not the desired behavior, please set shed_tool_config_file to your primary shed-enabled tool config file
galaxy.tool_util.toolbox.base INFO 2024-04-17 16:40:33,252 [pN:main,p:100449,tN:MainThread] Parsing the tool configuration /scratch/rico/tmp/tmp12w4107b/tool_conf.xml
galaxy.tool_util.toolbox.base DEBUG 2024-04-17 16:40:33,252 [pN:main,p:100449,tN:MainThread] Tool path for tool configuration /scratch/rico/tmp/tmp12w4107b/tool_conf.xml is None
galaxy.tool_util.toolbox.base DEBUG 2024-04-17 16:40:33,261 [pN:main,p:100449,tN:MainThread] Loaded tool id: upload1, version: 1.1.7 into tool panel..
galaxy.tool_util.toolbox.base DEBUG 2024-04-17 16:40:33,270 [pN:main,p:100449,tN:MainThread] Loaded tool id: segalign, version: 0.1.2.1+galaxy0 into tool panel..
galaxy.tools WARNING 2024-04-17 16:40:33,270 [pN:main,p:100449,tN:MainThread] The default shed tool config file (/scratch/rico/tmp/tmp12w4107b/shed_tool_conf.xml) has been added to the tool_config_file option, if this is not the desired behavior, please set shed_tool_config_file to your primary shed-enabled tool config file
galaxy.tool_util.toolbox.base INFO 2024-04-17 16:40:33,270 [pN:main,p:100449,tN:MainThread] Parsing the tool configuration /scratch/rico/tmp/tmp12w4107b/shed_tools_conf.xml
galaxy.tool_util.toolbox.base DEBUG 2024-04-17 16:40:33,270 [pN:main,p:100449,tN:MainThread] Tool path for shed tool configuration /scratch/rico/tmp/tmp12w4107b/shed_tools_conf.xml is /scratch/rico/tmp/tmp12w4107b/shed_tools
galaxy.tools WARNING 2024-04-17 16:40:33,270 [pN:main,p:100449,tN:MainThread] The default shed tool config file (/scratch/rico/tmp/tmp12w4107b/shed_tool_conf.xml) has been added to the tool_config_file option, if this is not the desired behavior, please set shed_tool_config_file to your primary shed-enabled tool config file
galaxy.tool_util.toolbox.base INFO 2024-04-17 16:40:33,270 [pN:main,p:100449,tN:MainThread] Parsing the tool configuration /scratch/rico/tmp/tmp12w4107b/empty_tool_conf.xml
galaxy.tool_util.toolbox.base DEBUG 2024-04-17 16:40:33,270 [pN:main,p:100449,tN:MainThread] Tool path for tool configuration /scratch/rico/tmp/tmp12w4107b/empty_tool_conf.xml is None
galaxy.tool_util.toolbox.base DEBUG 2024-04-17 16:40:33,270 [pN:main,p:100449,tN:MainThread] Reading tools from config files finished (18.841 ms)
galaxy.tool_util.toolbox.base DEBUG 2024-04-17 16:40:33,272 [pN:main,p:100449,tN:MainThread] Loaded tool id: upload1, version: 1.1.7 into tool panel..
galaxy.tool_util.toolbox.views.edam DEBUG 2024-04-17 16:40:33,273 [pN:main,p:100449,tN:MainThread] Loading EDAM tool panel finished (1.648 ms)
galaxy.tool_util.toolbox.base DEBUG 2024-04-17 16:40:33,274 [pN:main,p:100449,tN:MainThread] Loaded tool id: upload1, version: 1.1.7 into tool panel..
galaxy.tool_util.toolbox.views.edam DEBUG 2024-04-17 16:40:33,274 [pN:main,p:100449,tN:MainThread] Loading EDAM tool panel finished (1.272 ms)
galaxy.tool_util.toolbox.integrated_panel DEBUG 2024-04-17 16:40:33,274 [pN:main,p:100449,tN:MainThread] Writing integrated tool panel config file to '/scratch/rico/tmp/tmp12w4107b/integrated_tool_panel_conf.xml'
galaxy.util ERROR 2024-04-17 16:40:33,970 [pN:main,p:100449,tN:MainThread] Error parsing file /scratch/rico/tmp/tmp12w4107b
Traceback (most recent call last):
  File "/scratch/rico/galaxy/lib/galaxy/util/__init__.py", line 309, in parse_xml
    tree = etree.parse(str(fname), parser=parser)
  File "src/lxml/etree.pyx", line 3541, in lxml.etree.parse
  File "src/lxml/parser.pxi", line 1879, in lxml.etree._parseDocument
  File "src/lxml/parser.pxi", line 1905, in lxml.etree._parseDocumentFromURL
  File "src/lxml/parser.pxi", line 1808, in lxml.etree._parseDocFromFile
  File "src/lxml/parser.pxi", line 1180, in lxml.etree._BaseParser._parseDocFromFile
  File "src/lxml/parser.pxi", line 618, in lxml.etree._ParserContext._handleParseResultDoc
  File "src/lxml/parser.pxi", line 728, in lxml.etree._handleParseResult
  File "src/lxml/parser.pxi", line 657, in lxml.etree._raiseParseError
  File "/scratch/rico/tmp/tmp12w4107b", line 1
lxml.etree.XMLSyntaxError: Document is empty, line 1, column 1
galaxy.tools.data_manager.manager ERROR 2024-04-17 16:40:33,971 [pN:main,p:100449,tN:MainThread] There was an error parsing your Data Manager config file "/scratch/rico/tmp/tmp12w4107b": Document is empty, line 1, column 1 (tmp12w4107b, line 1)
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,973 [pN:main,p:100449,tN:MainThread] Loaded display application 'ucsc_bam' for datatype 'bam', inherit=False.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,974 [pN:main,p:100449,tN:MainThread] Loaded display application 'ensembl_bam' for datatype 'bam', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-04-17 16:40:33,975 [pN:main,p:100449,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "igv_broad_genomes".
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,976 [pN:main,p:100449,tN:MainThread] Loaded display application 'igv_bam' for datatype 'bam', inherit=False.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,976 [pN:main,p:100449,tN:MainThread] Loaded display application 'igb_bam' for datatype 'bam', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-04-17 16:40:33,976 [pN:main,p:100449,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "bam_iobio".
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,977 [pN:main,p:100449,tN:MainThread] Loaded display application 'iobio_bam' for datatype 'bam', inherit=False.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,977 [pN:main,p:100449,tN:MainThread] Loaded display application 'igb_bed' for datatype 'bed', inherit=False.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,978 [pN:main,p:100449,tN:MainThread] Loaded display application 'igb_bedgraph' for datatype 'bedgraph', inherit=False.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,978 [pN:main,p:100449,tN:MainThread] Loaded display application 'ucsc_bigbed' for datatype 'bigbed', inherit=False.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,978 [pN:main,p:100449,tN:MainThread] Loaded display application 'igb_bb' for datatype 'bigbed', inherit=False.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,979 [pN:main,p:100449,tN:MainThread] Loaded display application 'ucsc_bigwig' for datatype 'bigwig', inherit=False.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,979 [pN:main,p:100449,tN:MainThread] Loaded display application 'igb_bigwig' for datatype 'bigwig', inherit=False.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,980 [pN:main,p:100449,tN:MainThread] Loaded display application 'igv_bigwig' for datatype 'bigwig', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-04-17 16:40:33,980 [pN:main,p:100449,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "intermine_simple_display".
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,980 [pN:main,p:100449,tN:MainThread] Loaded display application 'intermine_simple' for datatype 'intermine_tabular', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-04-17 16:40:33,981 [pN:main,p:100449,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "igv_broad_genomes".
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,981 [pN:main,p:100449,tN:MainThread] Loaded display application 'igv_fasta' for datatype 'fasta', inherit=True.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,982 [pN:main,p:100449,tN:MainThread] Loaded display application 'ensembl_gff' for datatype 'gff', inherit=True.
galaxy.datatypes.display_applications.application ERROR 2024-04-17 16:40:33,982 [pN:main,p:100449,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "igv_broad_genomes".
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,982 [pN:main,p:100449,tN:MainThread] Loaded display application 'igv_gff' for datatype 'gff', inherit=True.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,983 [pN:main,p:100449,tN:MainThread] Loaded display application 'igb_gtf' for datatype 'gtf', inherit=False.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,984 [pN:main,p:100449,tN:MainThread] Loaded display application 'ensembl_interval' for datatype 'interval', inherit=True.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,985 [pN:main,p:100449,tN:MainThread] Loaded display application 'gbrowse_interval_as_bed' for datatype 'interval', inherit=True.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,985 [pN:main,p:100449,tN:MainThread] Loaded display application 'rviewer_interval' for datatype 'interval', inherit=True.
galaxy.datatypes.display_applications.application ERROR 2024-04-17 16:40:33,986 [pN:main,p:100449,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "igv_broad_genomes".
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,986 [pN:main,p:100449,tN:MainThread] Loaded display application 'igv_interval_as_bed' for datatype 'interval', inherit=True.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,986 [pN:main,p:100449,tN:MainThread] Loaded display application 'avivator' for datatype 'ome.tiff', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-04-17 16:40:33,986 [pN:main,p:100449,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "q2view_display".
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,987 [pN:main,p:100449,tN:MainThread] Loaded display application 'q2view' for datatype 'qza', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-04-17 16:40:33,987 [pN:main,p:100449,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "q2view_display".
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,987 [pN:main,p:100449,tN:MainThread] Loaded display application 'q2view' for datatype 'qzv', inherit=False.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,987 [pN:main,p:100449,tN:MainThread] Loaded display application 'ucsc_maf_customtrack' for datatype 'mafcustomtrack', inherit=False.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,988 [pN:main,p:100449,tN:MainThread] Loaded display application 'ucsc_vcf' for datatype 'vcf', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-04-17 16:40:33,989 [pN:main,p:100449,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "igv_broad_genomes".
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,989 [pN:main,p:100449,tN:MainThread] Loaded display application 'igv_vcf' for datatype 'vcf', inherit=False.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,989 [pN:main,p:100449,tN:MainThread] Loaded display application 'rviewer_vcf' for datatype 'vcf', inherit=True.
galaxy.datatypes.display_applications.application ERROR 2024-04-17 16:40:33,989 [pN:main,p:100449,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "vcf_iobio".
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,989 [pN:main,p:100449,tN:MainThread] Loaded display application 'iobio_vcf' for datatype 'vcf', inherit=False.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,989 [pN:main,p:100449,tN:MainThread] Loaded display application 'igb_wig' for datatype 'wig', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-04-17 16:40:33,990 [pN:main,p:100449,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "igv_broad_genomes".
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,990 [pN:main,p:100449,tN:MainThread] Loaded display application 'igv_vcf' for datatype 'vcf_bgzip', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-04-17 16:40:33,991 [pN:main,p:100449,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "igv_broad_genomes".
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,991 [pN:main,p:100449,tN:MainThread] Loaded display application 'igv_genbank' for datatype 'genbank', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-04-17 16:40:33,991 [pN:main,p:100449,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "biom_simple_display".
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,991 [pN:main,p:100449,tN:MainThread] Loaded display application 'biom_simple' for datatype 'biom1', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-04-17 16:40:33,991 [pN:main,p:100449,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "icn3d_simple_display".
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,991 [pN:main,p:100449,tN:MainThread] Loaded display application 'icn3d_simple' for datatype 'sdf', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-04-17 16:40:33,991 [pN:main,p:100449,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "icn3d_simple_display".
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,991 [pN:main,p:100449,tN:MainThread] Loaded display application 'icn3d_simple' for datatype 'mol2', inherit=False.
galaxy.datatypes.display_applications.application ERROR 2024-04-17 16:40:33,991 [pN:main,p:100449,tN:MainThread] Error loading a set of Dynamic Display Application links: Unable to find data table named "icn3d_simple_display".
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,991 [pN:main,p:100449,tN:MainThread] Loaded display application 'icn3d_simple' for datatype 'pdb', inherit=False.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,992 [pN:main,p:100449,tN:MainThread] Loaded display application 'ucsc_trackhub' for datatype 'trackhub', inherit=False.
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,992 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'bed'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,992 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'bed'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,992 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'bed'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,992 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'bed'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,992 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'bedgraph'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,992 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'bedgraph'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,992 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'bedgraph'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,992 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'bedgraph'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,992 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'bedstrict'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,992 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'bedstrict'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,992 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'bedstrict'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,992 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'bedstrict'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,992 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'bed6'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,992 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'bed6'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,992 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'bed6'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,992 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'bed6'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,992 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'bed12'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,992 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'bed12'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,992 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'bed12'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,993 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'bed12'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,993 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'probed'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,993 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'probed'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,993 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'probed'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,993 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'probed'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,993 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'chrint'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,993 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'chrint'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,993 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'chrint'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,993 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'chrint'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,993 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'igv_fasta' to datatype 'fasta.gz'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,993 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'ensembl_gff' to datatype 'gff3'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,993 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'igv_gff' to datatype 'gff3'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,993 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'ensembl_gff' to datatype 'gff3.gz'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,993 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'igv_gff' to datatype 'gff3.gz'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,993 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'ensembl_gff' to datatype 'gff3.bz2'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,993 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'igv_gff' to datatype 'gff3.bz2'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,993 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'ensembl_gff' to datatype 'gtf'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,993 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'igv_gff' to datatype 'gtf'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,994 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'encodepeak'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,994 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'encodepeak'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,994 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'encodepeak'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,994 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'encodepeak'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,995 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'igv_fasta' to datatype 'sequences'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,995 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'interval_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,995 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'interval_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,995 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'interval_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,995 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'interval_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,995 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'juicer_medium_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,995 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'juicer_medium_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,995 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'juicer_medium_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,995 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'juicer_medium_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,995 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'bed_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,995 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'bed_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,995 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'bed_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,995 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'bed_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,995 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'ensembl_interval' to datatype 'gff_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,995 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'gbrowse_interval_as_bed' to datatype 'gff_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,995 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'rviewer_interval' to datatype 'gff_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,995 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'igv_interval_as_bed' to datatype 'gff_tabix.gz'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,996 [pN:main,p:100449,tN:MainThread] Adding inherited display application 'igv_fasta' to datatype 'mothur.align'
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,998 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:33,999 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,000 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,001 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,002 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,003 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,003 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_Bam_Bai_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,004 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bam_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,005 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bam_to_qname_sorted_bam
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,005 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bam_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,006 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bam_to_coodinate_sorted_bam
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,007 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bam_to_qname_sorted_bam
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,008 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_cram_to_bam_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,008 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bed_to_gff_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,010 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_interval_to_bgzip_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,011 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_interval_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,011 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bed_gff_or_vcf_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,012 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bed_to_fli_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,013 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bedgraph_to_bigwig
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,013 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_len_to_linecount
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,014 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_parquet_to_csv
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,016 [pN:main,p:100449,tN:MainThread] Loaded converter: bigwigtowig
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,017 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_interval_to_bgzip_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,018 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_interval_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,018 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bed_gff_or_vcf_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,019 [pN:main,p:100449,tN:MainThread] Loaded converter: csv_to_tabular
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,020 [pN:main,p:100449,tN:MainThread] Loaded converter: tabular_to_csv
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,021 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_fasta_to_tabular
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,021 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_fasta_to_bowtie_base_index
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,022 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_fasta_to_bowtie_color_index
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,023 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_fasta_to_2bit
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,023 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_fasta_to_len
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,024 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_fasta_to_fai
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,025 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,026 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,026 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_fastq_to_fqtoc0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,027 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,028 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,029 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bz2_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,030 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_fastq_to_fqtoc0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,031 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,031 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,032 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bz2_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,033 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_fastq_to_fqtoc0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,034 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,034 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,035 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bz2_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,036 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_fastq_to_fqtoc0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,037 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,038 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,038 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bz2_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,039 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_fastq_to_fqtoc0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,040 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,041 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,042 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bz2_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,042 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_gff_to_bed_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,043 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_gff_to_interval_index_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,044 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bed_gff_or_vcf_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,044 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_gff_to_fli_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,046 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_interval_to_bgzip_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,046 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_interval_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,048 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,049 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,050 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bz2_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,051 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_gff_to_interval_index_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,051 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bed_gff_or_vcf_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,052 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_interval_to_bed_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,053 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_interval_to_bedstrict_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,053 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_interval_to_bed6_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,054 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_interval_to_bed12_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,055 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_interval_to_bgzip_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,056 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_interval_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,057 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_interval_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,058 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_picard_interval_list_to_bed6
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,058 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_tar_to_directory
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,059 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,060 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,061 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,062 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,063 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,064 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,064 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_maf_to_fasta_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,065 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_maf_to_interval_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,066 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_interval_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,067 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_interval_to_bgzip_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,068 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bed_gff_or_vcf_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,069 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_interval_to_bgzip_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,070 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_interval_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,071 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_sam_to_unsorted_bam
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,072 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bam_to_coodinate_sorted_bam
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,073 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bam_to_qname_sorted_bam
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,073 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_sam_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,074 [pN:main,p:100449,tN:MainThread] Loaded converter: tabular_to_dbnsfp
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,075 [pN:main,p:100449,tN:MainThread] Loaded converter: tabular_to_csv
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,076 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,076 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,078 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_interval_to_bgzip_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,079 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_vcf_to_vcf_bgzip_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,079 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_interval_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,080 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bed_gff_or_vcf_to_bigwig_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,081 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,082 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bcf_uncompressed_to_bcf
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,083 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_bcf_uncompressed_to_bcf
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,084 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_wig_to_bigwig
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,084 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_wiggle_to_interval_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,085 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_vcf_bgzip_to_tabix_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,086 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,086 [pN:main,p:100449,tN:MainThread] Loaded converter: lped2fpedconvert
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,087 [pN:main,p:100449,tN:MainThread] Loaded converter: lped2pbedconvert
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,088 [pN:main,p:100449,tN:MainThread] Loaded converter: pbed2lpedconvert
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,089 [pN:main,p:100449,tN:MainThread] Loaded converter: pbed2ldindepconvert
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,090 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_uncompressed_to_gz
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,090 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_gz_to_uncompressed
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,091 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_biom
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,092 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_biom
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,093 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,094 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,096 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,096 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_SMILES_to_MOL
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,097 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,098 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_smiles_to_smiles
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,099 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,100 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,101 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,102 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,104 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,105 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,105 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_inchi_to_mol
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,106 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,107 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,108 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,110 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,111 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,112 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,113 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,114 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,115 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,116 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,116 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_mol2_to_mol
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,118 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,118 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_cml_to_smiles
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,119 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,121 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,122 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_molecules
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,122 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_Pdb_to_Gro_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,124 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_mdconvert
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,125 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_mdconvert
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,125 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_mdconvert
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,126 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_mdconvert
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,127 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_mdconvert
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,128 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_mdconvert
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,129 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_Gro_to_Pdb_0
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,129 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_ref_to_seq_taxomony
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,130 [pN:main,p:100449,tN:MainThread] Loaded converter: CONVERTER_neostorezip_to_neostore
galaxy.datatypes.registry DEBUG 2024-04-17 16:40:34,131 [pN:main,p:100449,tN:MainThread] Loaded external metadata tool: __SET_METADATA__
galaxy.tools.special_tools DEBUG 2024-04-17 16:40:34,133 [pN:main,p:100449,tN:MainThread] Loaded history export tool: __EXPORT_HISTORY__
galaxy.tools.special_tools DEBUG 2024-04-17 16:40:34,133 [pN:main,p:100449,tN:MainThread] Loaded history export to uri tool: __EXPORT_HISTORY_TO_URI__
galaxy.tools.special_tools DEBUG 2024-04-17 16:40:34,134 [pN:main,p:100449,tN:MainThread] Loaded history import tool: __IMPORT_HISTORY__
galaxy.tools.special_tools DEBUG 2024-04-17 16:40:34,135 [pN:main,p:100449,tN:MainThread] Loaded data fetch tool: __DATA_FETCH__
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,136 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: PCA_3Dplot
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,137 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: aequatus
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,138 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: annotate_image
galaxy.visualization.plugins.config_parser INFO 2024-04-17 16:40:34,139 [pN:main,p:100449,tN:MainThread] template syntax is deprecated: use entry_point instead
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,139 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: chiraviz
galaxy.visualization.plugins.config_parser INFO 2024-04-17 16:40:34,140 [pN:main,p:100449,tN:MainThread] Visualizations plugin disabled: Circster. Skipping...
galaxy.visualization.plugins.config_parser INFO 2024-04-17 16:40:34,140 [pN:main,p:100449,tN:MainThread] template syntax is deprecated: use entry_point instead
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,140 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: csg
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,141 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: cytoscape
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,142 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: drawrna
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,143 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: editor
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,144 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: example
galaxy.visualization.plugins.config_parser INFO 2024-04-17 16:40:34,145 [pN:main,p:100449,tN:MainThread] template syntax is deprecated: use entry_point instead
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,145 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: graphviz
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,147 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: heatmap_cluster
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,149 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: heatmap_default
galaxy.visualization.plugins.config_parser INFO 2024-04-17 16:40:34,150 [pN:main,p:100449,tN:MainThread] template syntax is deprecated: use entry_point instead
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,150 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: hivtrace
galaxy.visualization.plugins.config_parser INFO 2024-04-17 16:40:34,150 [pN:main,p:100449,tN:MainThread] template syntax is deprecated: use entry_point instead
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,150 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: hyphyvision
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,153 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: jqplot_bar
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,154 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: jqplot_box
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,156 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: jqplot_histogram
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,158 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: jqplot_line
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,160 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: jqplot_scatter
galaxy.visualization.plugins.config_parser INFO 2024-04-17 16:40:34,160 [pN:main,p:100449,tN:MainThread] template syntax is deprecated: use entry_point instead
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,161 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: audio_player
galaxy.visualization.plugins.config_parser INFO 2024-04-17 16:40:34,161 [pN:main,p:100449,tN:MainThread] template syntax is deprecated: use entry_point instead
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,161 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: video_player
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,161 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: msa
galaxy.visualization.plugins.config_parser INFO 2024-04-17 16:40:34,162 [pN:main,p:100449,tN:MainThread] template syntax is deprecated: use entry_point instead
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,163 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: mvpapp
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,164 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: ngl
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,165 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: nora
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,167 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_bar
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,169 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_bar_stacked
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,171 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_histogram
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,173 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_histogram_discrete
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,175 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_horizontal
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,176 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_horizontal_stacked
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,178 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_line
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,180 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_line_focus
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,182 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_pie
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,183 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_scatter
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,185 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_stackedarea
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,187 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_stackedarea_full
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,189 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: nvd3_stackedarea_stream
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,190 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: openlayers
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,191 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: openseadragon
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,192 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: phylocanvas
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,193 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: phyloviz
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,194 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: pv
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,195 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: scatterplot
galaxy.visualization.plugins.config_parser INFO 2024-04-17 16:40:34,195 [pN:main,p:100449,tN:MainThread] Visualizations plugin disabled: Sweepster. Skipping...
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,196 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: trackster
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,196 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: ts_visjs
galaxy.visualization.plugins.config_parser INFO 2024-04-17 16:40:34,196 [pN:main,p:100449,tN:MainThread] template syntax is deprecated: use entry_point instead
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,196 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: unipept
galaxy.visualization.plugins.registry INFO 2024-04-17 16:40:34,197 [pN:main,p:100449,tN:MainThread] VisualizationsRegistry, loaded plugin: venn
galaxy.tours._impl INFO 2024-04-17 16:40:34,220 [pN:main,p:100449,tN:MainThread] Loaded tour 'core.galaxy_ui'
galaxy.tours._impl INFO 2024-04-17 16:40:34,237 [pN:main,p:100449,tN:MainThread] Loaded tour 'core.deferred'
galaxy.tours._impl INFO 2024-04-17 16:40:34,250 [pN:main,p:100449,tN:MainThread] Loaded tour 'core.history'
galaxy.tours._impl INFO 2024-04-17 16:40:34,261 [pN:main,p:100449,tN:MainThread] Loaded tour 'core.windows'
galaxy.workflow.scheduling_manager INFO 2024-04-17 16:40:34,267 [pN:main,p:100449,tN:MainThread] No workflow schedulers plugin config file defined, using default scheduler.
galaxy.web_stack.handlers INFO 2024-04-17 16:40:34,267 [pN:main,p:100449,tN:MainThread] WorkflowSchedulingManager: No job handler assignment method is set, defaulting to 'HANDLER_ASSIGNMENT_METHODS.DB_SKIP_LOCKED', set the `assign_with` attribute on <handlers> to override the default
galaxy.workflow.scheduling_manager DEBUG 2024-04-17 16:40:34,267 [pN:main,p:100449,tN:MainThread] Starting workflow schedulers
galaxy.app INFO 2024-04-17 16:40:34,269 [pN:main,p:100449,tN:MainThread] Galaxy app startup finished (5057.528 ms)
galaxy.web.framework.base DEBUG 2024-04-17 16:40:34,347 [pN:main,p:100449,tN:MainThread] Enabling 'user' controller, class: User
galaxy.web.framework.base DEBUG 2024-04-17 16:40:34,348 [pN:main,p:100449,tN:MainThread] Enabling 'data_manager' controller, class: DataManager
galaxy.web.framework.base DEBUG 2024-04-17 16:40:34,349 [pN:main,p:100449,tN:MainThread] Enabling 'async' controller, class: ASync
galaxy.web.framework.base DEBUG 2024-04-17 16:40:34,350 [pN:main,p:100449,tN:MainThread] Enabling 'tag' controller, class: TagsController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:34,358 [pN:main,p:100449,tN:MainThread] Enabling 'page' controller, class: PageController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:34,359 [pN:main,p:100449,tN:MainThread] Enabling 'root' controller, class: RootController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:34,359 [pN:main,p:100449,tN:MainThread] Enabling 'tool_runner' controller, class: ToolRunner
galaxy.web.framework.base DEBUG 2024-04-17 16:40:34,360 [pN:main,p:100449,tN:MainThread] Enabling 'error' controller, class: Error
galaxy.web.framework.base DEBUG 2024-04-17 16:40:34,360 [pN:main,p:100449,tN:MainThread] Enabling 'forms' controller, class: Forms
galaxy.web.framework.base DEBUG 2024-04-17 16:40:34,375 [pN:main,p:100449,tN:MainThread] Enabling 'admin_toolshed' controller, class: AdminGalaxy
galaxy.web.framework.base DEBUG 2024-04-17 16:40:34,376 [pN:main,p:100449,tN:MainThread] Enabling 'admin_toolshed' controller, class: AdminToolshed
galaxy.web.framework.base DEBUG 2024-04-17 16:40:34,377 [pN:main,p:100449,tN:MainThread] Enabling 'visualization' controller, class: VisualizationController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:34,377 [pN:main,p:100449,tN:MainThread] Enabling 'shed_tool_static' controller, class: ShedToolStatic
galaxy.web.framework.base DEBUG 2024-04-17 16:40:34,511 [pN:main,p:100449,tN:MainThread] Enabling 'authnz' controller, class: JSAppLauncher
galaxy.web.framework.base DEBUG 2024-04-17 16:40:34,511 [pN:main,p:100449,tN:MainThread] Enabling 'authnz' controller, class: OIDC
galaxy.web.framework.base DEBUG 2024-04-17 16:40:35,134 [pN:main,p:100449,tN:MainThread] Enabling 'workflow' controller, class: WorkflowController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:35,138 [pN:main,p:100449,tN:MainThread] Enabling 'history' controller, class: HistoryController
galaxy.config DEBUG 2024-04-17 16:40:35,174 [pN:main,p:100449,tN:MainThread] Configuration directory is /scratch/rico/tmp/tmp12w4107b
galaxy.config DEBUG 2024-04-17 16:40:35,175 [pN:main,p:100449,tN:MainThread] Data directory is /scratch/rico/galaxy/database
galaxy.config DEBUG 2024-04-17 16:40:35,175 [pN:main,p:100449,tN:MainThread] Managed config directory is /scratch/rico/tmp/tmp12w4107b
galaxy.config WARNING 2024-04-17 16:40:35,203 [pN:main,p:100449,tN:MainThread] Option master_api_key has been deprecated in favor of bootstrap_admin_api_key
galaxy.config DEBUG 2024-04-17 16:40:35,204 [pN:main,p:100449,tN:MainThread] No extra version JSON file detected at /scratch/rico/galaxy/version.json
galaxy.web.framework.base DEBUG 2024-04-17 16:40:35,231 [pN:main,p:100449,tN:MainThread] Enabling 'dataset' controller, class: DatasetInterface
galaxy.web.framework.base DEBUG 2024-04-17 16:40:35,232 [pN:main,p:100449,tN:MainThread] Enabling 'userskeys' controller, class: User
galaxy.web.framework.base DEBUG 2024-04-17 16:40:35,232 [pN:main,p:100449,tN:MainThread] Enabling 'admin' controller, class: AdminGalaxy
galaxy.web.framework.base DEBUG 2024-04-17 16:40:37,477 [pN:main,p:100449,tN:MainThread] Enabling 'library_datasets' API controller, class: LibraryDatasetsController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:37,500 [pN:main,p:100449,tN:MainThread] Enabling 'jobs' API controller, class: JobController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:37,602 [pN:main,p:100449,tN:MainThread] Enabling 'job_files' API controller, class: JobFilesAPIController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:37,725 [pN:main,p:100449,tN:MainThread] Enabling 'toolshed' API controller, class: ToolShedController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:37,740 [pN:main,p:100449,tN:MainThread] Enabling 'tools' API controller, class: ToolsController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:37,885 [pN:main,p:100449,tN:MainThread] Enabling 'groups' API controller, class: GroupAPIController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:37,886 [pN:main,p:100449,tN:MainThread] Enabling 'trs_consumer' API controller, class: TrsConsumeAPIController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:37,888 [pN:main,p:100449,tN:MainThread] Enabling 'history_dataset_extended_metadata' API controller, class: HistoryDatasetExtendMetadataController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:37,888 [pN:main,p:100449,tN:MainThread] Enabling 'library_dataset_extended_metadata' API controller, class: LibraryDatasetExtendMetadataController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:37,889 [pN:main,p:100449,tN:MainThread] Enabling 'container_resolution' API controller, class: ContainerResolutionAPIController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:37,890 [pN:main,p:100449,tN:MainThread] Enabling 'job_ports' API controller, class: JobPortsAPIController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:37,891 [pN:main,p:100449,tN:MainThread] Enabling 'tool_dependencies' API controller, class: ToolDependenciesAPIController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:38,060 [pN:main,p:100449,tN:MainThread] Enabling 'cloud' API controller, class: CloudController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:38,323 [pN:main,p:100449,tN:MainThread] Enabling 'history_content_provenance' API controller, class: HDAProvenanceController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:38,323 [pN:main,p:100449,tN:MainThread] Enabling 'ldda_provenance' API controller, class: LDDAProvenanceController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:38,324 [pN:main,p:100449,tN:MainThread] Enabling 'tool_entry_points' API controller, class: ToolEntryPointsAPIController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:38,338 [pN:main,p:100449,tN:MainThread] Enabling 'authenticate' API controller, class: AuthenticationController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:39,137 [pN:main,p:100449,tN:MainThread] Enabling 'trs_search' API controller, class: TrsSearchAPIController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:39,199 [pN:main,p:100449,tN:MainThread] Enabling 'tool_shed_repositories' API controller, class: ToolShedRepositoriesController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:39,200 [pN:main,p:100449,tN:MainThread] Enabling 'display_applications' API controller, class: DisplayApplicationsController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:39,601 [pN:main,p:100449,tN:MainThread] Enabling 'search' API controller, class: SearchController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:40,109 [pN:main,p:100449,tN:MainThread] Enabling 'forms' API controller, class: FormDefinitionAPIController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:40,439 [pN:main,p:100449,tN:MainThread] Enabling 'workflows' API controller, class: WorkflowsAPIController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:40,439 [pN:main,p:100449,tN:MainThread] Enabling 'uploads' API controller, class: UploadsAPIController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:41,828 [pN:main,p:100449,tN:MainThread] Enabling 'history_annotations' API controller, class: HistoryAnnotationsController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:41,828 [pN:main,p:100449,tN:MainThread] Enabling 'history_content_annotations' API controller, class: HistoryContentAnnotationsController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:41,828 [pN:main,p:100449,tN:MainThread] Enabling 'workflow_annotations' API controller, class: WorkflowAnnotationsController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:41,909 [pN:main,p:100449,tN:MainThread] Enabling 'visualizations' API controller, class: VisualizationsController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:41,909 [pN:main,p:100449,tN:MainThread] Enabling 'sanitize_allow' API controller, class: SanitizeAllowController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:41,909 [pN:main,p:100449,tN:MainThread] Enabling 'page_revisions' API controller, class: PageRevisionsController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:42,047 [pN:main,p:100449,tN:MainThread] Enabling 'library_contents' API controller, class: LibraryContentsController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:42,081 [pN:main,p:100449,tN:MainThread] Enabling 'users' API controller, class: UserAPIController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:42,082 [pN:main,p:100449,tN:MainThread] Enabling 'cloudauthz' API controller, class: CloudAuthzController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:42,082 [pN:main,p:100449,tN:MainThread] Enabling 'webhooks' API controller, class: WebhooksController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:42,083 [pN:main,p:100449,tN:MainThread] Enabling 'history_content_tags' API controller, class: HistoryContentTagsController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:42,083 [pN:main,p:100449,tN:MainThread] Enabling 'history_tags' API controller, class: HistoryTagsController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:42,083 [pN:main,p:100449,tN:MainThread] Enabling 'workflow_tags' API controller, class: WorkflowTagsController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:42,092 [pN:main,p:100449,tN:MainThread] Enabling 'plugins' API controller, class: PluginsController
galaxy.web.framework.base DEBUG 2024-04-17 16:40:42,455 [pN:main,p:100449,tN:MainThread] Enabling 'dynamic_tools' API controller, class: DynamicToolsController
galaxy.webapps.util DEBUG 2024-04-17 16:40:42,790 [pN:main,p:100449,tN:MainThread] Enabling 'paste.httpexceptions' middleware
galaxy.webapps.util DEBUG 2024-04-17 16:40:42,791 [pN:main,p:100449,tN:MainThread] Enabling 'RemoteUser' middleware
galaxy.webapps.util DEBUG 2024-04-17 16:40:42,817 [pN:main,p:100449,tN:MainThread] Enabling 'RecursiveMiddleware' middleware
galaxy.webapps.util DEBUG 2024-04-17 16:40:42,817 [pN:main,p:100449,tN:MainThread] Enabling 'ErrorMiddleware' middleware
galaxy.webapps.util DEBUG 2024-04-17 16:40:42,817 [pN:main,p:100449,tN:MainThread] Enabling 'TusMiddleware' middleware
galaxy.webapps.util DEBUG 2024-04-17 16:40:42,817 [pN:main,p:100449,tN:MainThread] Enabling 'XForwardedHostMiddleware' middleware
galaxy.webapps.util DEBUG 2024-04-17 16:40:42,817 [pN:main,p:100449,tN:MainThread] Enabling 'RequestIDMiddleware' middleware
galaxy.webapps.util DEBUG 2024-04-17 16:40:42,818 [pN:main,p:100449,tN:MainThread] Enabling 'build_url_map' middleware
galaxy.webapps.galaxy.buildapp DEBUG 2024-04-17 16:40:42,818 [pN:main,p:100449,tN:MainThread] Prior to webapp return, Galaxy thread <_MainThread(MainThread, started 140179676497728)> is alive.
/scratch/rico/galaxy/lib/galaxy/webapps/openapi/utils.py:463: UserWarning: Merging operation with id fetch_json_api_tools_fetch_post with operation with id fetch_form_api_tools_fetch_post.
  warnings.warn(message)
[2024-04-17 16:40:45 -0400] [100449] [INFO] Starting gunicorn 20.1.0
[2024-04-17 16:40:45 -0400] [100449] [INFO] Listening at: http://127.0.0.1:9090 (100449)
[2024-04-17 16:40:45 -0400] [100449] [INFO] Using worker: galaxy.webapps.galaxy.workers.Worker
[2024-04-17 16:40:45 -0400] [100659] [INFO] Booting worker with pid: 100659
galaxy.web_stack DEBUG 2024-04-17 16:40:45,637 [pN:main.1,p:100659,tN:Thread-2] server_name set to: main.1
galaxy.jobs.manager DEBUG 2024-04-17 16:40:45,638 [pN:main.1,p:100659,tN:Thread-2] Initializing job handler
galaxy.jobs INFO 2024-04-17 16:40:45,639 [pN:main.1,p:100659,tN:Thread-2] Handler 'main.1' will load all configured runner plugins
galaxy.jobs.runners.state_handler_factory DEBUG 2024-04-17 16:40:45,662 [pN:main.1,p:100659,tN:Thread-2] Loaded 'failure' state handler from module galaxy.jobs.runners.state_handlers.resubmit
galaxy.jobs DEBUG 2024-04-17 16:40:45,662 [pN:main.1,p:100659,tN:Thread-2] Loaded job runner 'galaxy.jobs.runners.local:LocalJobRunner' as 'planemo_runner'
galaxy.jobs.handler DEBUG 2024-04-17 16:40:45,663 [pN:main.1,p:100659,tN:Thread-2] Loaded job runners plugins: planemo_runner
galaxy.jobs.handler INFO 2024-04-17 16:40:45,663 [pN:main.1,p:100659,tN:Thread-2] job handler stop queue started
galaxy.jobs.runners DEBUG 2024-04-17 16:40:45,664 [pN:main.1,p:100659,tN:Thread-2] Starting 4 LocalRunner workers
galaxy.jobs.handler DEBUG 2024-04-17 16:40:45,665 [pN:main.1,p:100659,tN:Thread-2] Handler queue starting for jobs assigned to handler: main.1
galaxy.jobs.handler INFO 2024-04-17 16:40:47,126 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] Handler job grabber initialized with 'HANDLER_ASSIGNMENT_METHODS.DB_SKIP_LOCKED' assignment method for handler 'main.1', tag(s): 
galaxy.jobs.handler INFO 2024-04-17 16:40:47,126 [pN:main.1,p:100659,tN:Thread-2] job handler queue started
galaxy.jobs.handler INFO 2024-04-17 16:40:47,132 [pN:main.1,p:100659,tN:Thread-2] job handler stop queue started
galaxy.jobs.handler INFO 2024-04-17 16:40:47,135 [pN:main.1,p:100659,tN:WorkflowRequestMonitor.monitor_thread] Handler job grabber initialized with 'HANDLER_ASSIGNMENT_METHODS.DB_SKIP_LOCKED' assignment method for handler 'main.1', tag(s): _default_, None
galaxy.queue_worker INFO 2024-04-17 16:40:47,144 [pN:main.1,p:100659,tN:Thread-2] Binding and starting galaxy control worker for main.1
galaxy.queue_worker INFO 2024-04-17 16:40:47,154 [pN:main.1,p:100659,tN:Thread-2] Queuing async task rebuild_toolbox_search_index for main.1.
[2024-04-17 16:40:47 -0400] [100659] [INFO] Started server process [100659]
[2024-04-17 16:40:47 -0400] [100659] [INFO] Waiting for application startup.
[2024-04-17 16:40:47 -0400] [100659] [INFO] Application startup complete.
galaxy.model.database_heartbeat DEBUG 2024-04-17 16:40:47,249 [pN:main.1,p:100659,tN:database_heartbeart_main.1.thread] main.1 is config watcher
galaxy.web_stack INFO 2024-04-17 16:40:47,281 [pN:main.1,p:100659,tN:Thread-2] Galaxy server instance 'main.1' is running
serving on http://127.0.0.1:9090
galaxy.queue_worker INFO 2024-04-17 16:40:47,293 [pN:main.1,p:100659,tN:Thread-1] Instance 'main.1' received 'rebuild_toolbox_search_index' task, executing now.
galaxy.tools.search DEBUG 2024-04-17 16:40:47,293 [pN:main.1,p:100659,tN:Thread-1] Starting to build toolbox index of panel default.
galaxy.tools.search DEBUG 2024-04-17 16:40:47,302 [pN:main.1,p:100659,tN:Thread-1] Toolbox index of panel default finished (8.935 ms)
galaxy.tools.search DEBUG 2024-04-17 16:40:47,303 [pN:main.1,p:100659,tN:Thread-1] Starting to build toolbox index of panel ontology:edam_operations.
galaxy.tools.search DEBUG 2024-04-17 16:40:47,306 [pN:main.1,p:100659,tN:Thread-1] Toolbox index of panel ontology:edam_operations finished (3.617 ms)
galaxy.tools.search DEBUG 2024-04-17 16:40:47,306 [pN:main.1,p:100659,tN:Thread-1] Starting to build toolbox index of panel ontology:edam_topics.
galaxy.tools.search DEBUG 2024-04-17 16:40:47,310 [pN:main.1,p:100659,tN:Thread-1] Toolbox index of panel ontology:edam_topics finished (3.674 ms)
galaxy.webapps.base.webapp DEBUG 2024-04-17 16:41:35,014 [pN:main.1,p:100659,tN:WSGI_0] Received invalid session key '{secure_id}', setting a new session key
/scratch/rico/galaxy/lib/galaxy/webapps/base/webapp.py:740: SAWarning: Dialect sqlite+pysqlite does *not* support Decimal objects natively, and SQLAlchemy must convert from floating point - rounding errors and other issues may occur. Please consider storing Decimal numbers as strings or integers on this platform for lossless storage.
  self.sa_session.query(self.app.model.User)
/scratch/rico/galaxy/lib/galaxy/webapps/base/webapp.py:329: SAWarning: Dialect sqlite+pysqlite does *not* support Decimal objects natively, and SQLAlchemy must convert from floating point - rounding errors and other issues may occur. Please consider storing Decimal numbers as strings or integers on this platform for lossless storage.
  if config.use_remote_user and self.galaxy_session.user.deleted:
uvicorn.access INFO 2024-04-17 16:41:35,220 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:38066 - "GET / HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:35,236 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:38066 - "GET /static/dist/base.css?v=1713286767000 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:35,259 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:38068 - "GET /static/dist/analysis.bundled.js?v=1713286767000 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:35,717 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:38068 - "GET /api/webhooks HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:35,771 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:38066 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:35,781 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:38068 - "GET /api/users/current HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:35,809 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40036 - "GET /welcome HTTP/1.1" 302
uvicorn.access INFO 2024-04-17 16:41:35,834 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40050 - "GET /api/webhooks HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:35,846 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:38066 - "GET /api/tools?in_panel=true&view=default HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:35,862 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40026 - "GET /api/configuration HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:35,887 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:38068 - "GET /api/histories?view=summary HTTP/1.1" 200
/scratch/rico/galaxy/lib/galaxy/model/__init__.py:2895: SAWarning: Dialect sqlite+pysqlite does *not* support Decimal objects natively, and SQLAlchemy must convert from floating point - rounding errors and other issues may occur. Please consider storing Decimal numbers as strings or integers on this platform for lossless storage.
  rval = db_session.query(
uvicorn.access INFO 2024-04-17 16:41:35,939 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40064 - "GET /history/current_history_json HTTP/1.1" 200
/scratch/rico/galaxy/lib/galaxy/managers/history_contents.py:259: SAWarning: Dialect sqlite+pysqlite does *not* support Decimal objects natively, and SQLAlchemy must convert from floating point - rounding errors and other issues may occur. Please consider storing Decimal numbers as strings or integers on this platform for lossless storage.
  contents_results = self._union_of_contents_query(container, **kwargs).all()
uvicorn.access INFO 2024-04-17 16:41:36,075 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40064 - "GET /api/histories/d23b2492b9db9f5f/contents?v=dev&limit=1000&q=update_time-ge&qv=2024-04-17T20:41:35.459Z HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:36,082 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:38068 - "GET /history/current_history_json HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:36,178 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:38066 - "GET /api/datatypes?extension_only=False HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:36,179 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40064 - "GET /api/users/d23b2492b9db9f5f HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:36,284 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40050 - "GET /api/genomes HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:36,313 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:38068 - "GET /api/histories/d23b2492b9db9f5f?view=summary&keys=size,contents_active,user_id HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:36,318 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40026 - "GET /api/histories/d23b2492b9db9f5f/contents?v=dev&order=hid&offset=0&limit=100&q=deleted&qv=false&q=visible&qv=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:39,142 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40080 - "GET /history/current_history_json?since=2024-04-17T20:41:35.000889 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:42,174 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40092 - "GET /history/current_history_json?since=2024-04-17T20:41:35.000889 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:45,215 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40096 - "GET /history/current_history_json?since=2024-04-17T20:41:35.000889 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:45,771 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40096 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:48,250 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:51078 - "GET /history/current_history_json?since=2024-04-17T20:41:35.000889 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:51,288 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:51082 - "GET /history/current_history_json?since=2024-04-17T20:41:35.000889 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:54,323 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:51084 - "GET /history/current_history_json?since=2024-04-17T20:41:35.000889 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:55,773 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:51084 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:41:57,358 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:51084 - "GET /history/current_history_json?since=2024-04-17T20:41:35.000889 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:00,393 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:52308 - "GET /history/current_history_json?since=2024-04-17T20:41:35.000889 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:03,436 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:52322 - "GET /history/current_history_json?since=2024-04-17T20:41:35.000889 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:05,772 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:35856 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:06,471 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:35856 - "GET /history/current_history_json?since=2024-04-17T20:41:35.000889 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:09,506 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:35870 - "GET /history/current_history_json?since=2024-04-17T20:41:35.000889 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:12,549 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:35880 - "GET /history/current_history_json?since=2024-04-17T20:41:35.000889 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:15,583 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:35886 - "GET /history/current_history_json?since=2024-04-17T20:41:35.000889 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:15,771 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:35886 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:18,618 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:42486 - "GET /history/current_history_json?since=2024-04-17T20:41:35.000889 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:21,651 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:42494 - "GET /history/current_history_json?since=2024-04-17T20:41:35.000889 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:24,686 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:42498 - "GET /history/current_history_json?since=2024-04-17T20:41:35.000889 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:25,775 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:42498 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:27,722 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:42498 - "GET /history/current_history_json?since=2024-04-17T20:41:35.000889 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:30,758 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:35394 - "GET /history/current_history_json?since=2024-04-17T20:41:35.000889 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:33,791 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:35400 - "GET /history/current_history_json?since=2024-04-17T20:41:35.000889 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:35,775 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:35400 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:36,826 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:35400 - "GET /history/current_history_json?since=2024-04-17T20:41:35.000889 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:39,858 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53056 - "GET /history/current_history_json?since=2024-04-17T20:41:35.000889 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:42,895 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53072 - "GET /history/current_history_json?since=2024-04-17T20:41:35.000889 HTTP/1.1" 200
galaxy.files.uris DEBUG 2024-04-17 16:42:45,545 [pN:main.1,p:100659,tN:MainThread] parsed url, port: hgdownload.soe.ucsc.edu : None
galaxy.files.uris DEBUG 2024-04-17 16:42:45,546 [pN:main.1,p:100659,tN:MainThread] parsed url, port: hgdownload.soe.ucsc.edu : None
galaxy.tools INFO 2024-04-17 16:42:45,559 [pN:main.1,p:100659,tN:MainThread] Validated and populated state for tool request (0.162 ms)
galaxy.tools.actions.upload DEBUG 2024-04-17 16:42:45,578 [pN:main.1,p:100659,tN:MainThread] Persisted uploads (0.012 ms)
galaxy.tools.actions.upload DEBUG 2024-04-17 16:42:45,750 [pN:main.1,p:100659,tN:MainThread] Created upload job (15.530 ms)
galaxy.tools.execute DEBUG 2024-04-17 16:42:45,750 [pN:main.1,p:100659,tN:MainThread] Tool __DATA_FETCH__ created job None (172.521 ms)
galaxy.web_stack.handlers INFO 2024-04-17 16:42:45,786 [pN:main.1,p:100659,tN:MainThread] (Job[id=1,tool_id=__DATA_FETCH__]) Handler '_default_' assigned using 'HANDLER_ASSIGNMENT_METHODS.DB_SKIP_LOCKED' assignment method
galaxy.tools.execute DEBUG 2024-04-17 16:42:45,797 [pN:main.1,p:100659,tN:MainThread] Created 1 job(s) for tool __DATA_FETCH__ request (237.858 ms)
uvicorn.access INFO 2024-04-17 16:42:45,844 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53078 - "POST /api/tools/fetch HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:45,888 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:59400 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:45,906 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53078 - "GET /history/current_history_json?since=2024-04-17T20:41:35.000889 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:45,970 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53078 - "GET /api/histories/d23b2492b9db9f5f/contents?v=dev&limit=1000&q=update_time-ge&qv=2024-04-17T20:41:35.946Z HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:46,022 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53078 - "GET /api/users/d23b2492b9db9f5f HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:46,063 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:59400 - "GET /api/histories/d23b2492b9db9f5f/contents?v=dev&order=hid&offset=0&limit=100&q=deleted&qv=false&q=visible&qv=true HTTP/1.1" 200
galaxy.jobs.mapper DEBUG 2024-04-17 16:42:46,325 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] (1) Mapped job to destination id: planemo_dest
galaxy.jobs.handler DEBUG 2024-04-17 16:42:46,347 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] (1) Dispatching to planemo_runner runner
galaxy.jobs DEBUG 2024-04-17 16:42:46,382 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] (1) Persisting job destination (destination id: planemo_dest)
galaxy.jobs DEBUG 2024-04-17 16:42:46,407 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] (1) Working directory for job is: /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/1
galaxy.jobs.runners DEBUG 2024-04-17 16:42:46,415 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] Job [1] queued (67.323 ms)
galaxy.jobs.handler INFO 2024-04-17 16:42:46,424 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] (1) Job dispatched
galaxy.jobs DEBUG 2024-04-17 16:42:46,672 [pN:main.1,p:100659,tN:LocalRunner.work_thread-0] Job wrapper for Job [1] prepared (217.489 ms)
galaxy.jobs.command_factory INFO 2024-04-17 16:42:46,695 [pN:main.1,p:100659,tN:LocalRunner.work_thread-0] Built script [/scratch/rico/tmp/tmp12w4107b/job_working_directory/000/1/tool_script.sh] for tool command [python '/scratch/rico/galaxy/lib/galaxy/tools/data_fetch.py' --galaxy-root '/scratch/rico/galaxy' --datatypes-registry '/scratch/rico/tmp/tmp12w4107b/job_working_directory/000/1/registry.xml' --request-version '1' --request '/scratch/rico/tmp/tmp12w4107b/job_working_directory/000/1/configs/tmpsgrlxr_o']
galaxy.jobs.runners DEBUG 2024-04-17 16:42:46,842 [pN:main.1,p:100659,tN:LocalRunner.work_thread-0] (1) command is: mkdir -p working outputs configs
if [ -d _working ]; then
    rm -rf working/ outputs/ configs/; cp -R _working working; cp -R _outputs outputs; cp -R _configs configs
else
    cp -R working _working; cp -R outputs _outputs; cp -R configs _configs
fi
cd working; /bin/bash /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/1/tool_script.sh > '../outputs/tool_stdout' 2> '../outputs/tool_stderr'; return_code=$?; echo $return_code > /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/1/galaxy_1.ec; cd '/scratch/rico/tmp/tmp12w4107b/job_working_directory/000/1'; 
[ "$GALAXY_VIRTUAL_ENV" = "None" ] && GALAXY_VIRTUAL_ENV="$_GALAXY_VIRTUAL_ENV"; _galaxy_setup_environment True; python metadata/set.py; sh -c "exit $return_code"
galaxy.jobs.runners.local DEBUG 2024-04-17 16:42:46,863 [pN:main.1,p:100659,tN:LocalRunner.work_thread-0] (1) executing job script: /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/1/galaxy_1.sh
uvicorn.access INFO 2024-04-17 16:42:49,080 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:59408 - "GET /history/current_history_json?since=2024-04-17T20:42:45.000727 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:49,142 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:59408 - "GET /api/histories/d23b2492b9db9f5f/contents?v=dev&limit=1000&q=update_time-ge&qv=2024-04-17T20:42:45.913Z HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:49,195 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:59408 - "GET /api/users/d23b2492b9db9f5f HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:49,233 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:59410 - "GET /api/histories/d23b2492b9db9f5f/contents?v=dev&order=hid&offset=0&limit=100&q=deleted&qv=false&q=visible&qv=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:52,194 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:59426 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:55,228 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:59434 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:55,779 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:59434 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:42:58,263 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:34840 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:01,306 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:34844 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:04,343 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:34846 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:05,783 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:34846 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:07,373 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:34846 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:10,410 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:33714 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:13,443 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:33730 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:15,794 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:33358 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:16,477 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:33358 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:19,519 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:33374 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:22,560 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:33382 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:25,594 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:33388 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:25,782 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:33388 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:28,627 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:56312 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:31,663 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:56328 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:34,699 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:56330 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:35,786 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:56330 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:37,731 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:56330 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:40,766 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:33212 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:43,801 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:33216 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:45,788 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:33216 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:46,834 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:33216 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:49,870 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:44378 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:52,907 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:44384 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
galaxy.jobs.runners.util.process_groups DEBUG 2024-04-17 16:43:54,966 [pN:main.1,p:100659,tN:LocalRunner.work_thread-0] check_pg(): No process found in process group 100756
galaxy.jobs.runners.local DEBUG 2024-04-17 16:43:54,967 [pN:main.1,p:100659,tN:LocalRunner.work_thread-0] execution finished: /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/1/galaxy_1.sh
galaxy.jobs DEBUG 2024-04-17 16:43:55,001 [pN:main.1,p:100659,tN:LocalRunner.work_thread-0] finish(): Moved /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/1/outputs/dataset_f942d97c-6c27-4ee4-8ad1-bb1227186612.dat to /scratch/rico/tmp/tmp12w4107b/files/f/9/4/dataset_f942d97c-6c27-4ee4-8ad1-bb1227186612.dat
galaxy.jobs DEBUG 2024-04-17 16:43:55,001 [pN:main.1,p:100659,tN:LocalRunner.work_thread-0] finish(): Moved /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/1/outputs/dataset_fe981322-ad11-477a-8c4f-623aad83cb29.dat to /scratch/rico/tmp/tmp12w4107b/files/f/e/9/dataset_fe981322-ad11-477a-8c4f-623aad83cb29.dat
galaxy.tool_util.provided_metadata DEBUG 2024-04-17 16:43:55,033 [pN:main.1,p:100659,tN:LocalRunner.work_thread-0] unnamed outputs [{'__unnamed_outputs': [{'destination': {'type': 'hdas'}, 'elements': [{'name': 'hg38.fa.gz', 'dbkey': '?', 'ext': 'fasta.gz', 'link_data_only': False, 'sources': [{'source_uri': 'https://hgdownload.soe.ucsc.edu/goldenPath/hg38/bigZips/hg38.fa.gz'}], 'hashes': [], 'info': 'uploaded fasta.gz file', 'state': 'ok', 'filename': '/scratch/rico/tmp/tmp12w4107b/job_working_directory/000/1/working/gx_file_streamqer1e837', 'object_id': 1}, {'name': 'mm39.fa.gz', 'dbkey': '?', 'ext': 'fasta.gz', 'link_data_only': False, 'sources': [{'source_uri': 'https://hgdownload.soe.ucsc.edu/goldenPath/mm39/bigZips/mm39.fa.gz'}], 'hashes': [], 'info': 'uploaded fasta.gz file', 'state': 'ok', 'filename': '/scratch/rico/tmp/tmp12w4107b/job_working_directory/000/1/working/gx_file_streambdx1tghy', 'object_id': 2}]}]}]
uvicorn.access INFO 2024-04-17 16:43:55,803 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:42166 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:55,939 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:42166 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:43:58,978 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:42170 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:02,016 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:42176 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:05,063 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:42188 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:05,792 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:42188 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:08,102 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:51382 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:11,137 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:51388 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:14,172 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:51398 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:15,808 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:51398 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:17,204 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:51398 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:20,246 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37780 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:23,288 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37796 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:25,802 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:59346 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:26,324 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:59346 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:29,368 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:59358 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:32,403 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:59370 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:35,436 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:59372 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:35,802 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:59372 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:38,463 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:44694 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:41,501 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:44704 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:44,545 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:44706 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:45,800 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:44706 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:47,586 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:44706 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:50,623 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:43634 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:53,663 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:43650 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:55,810 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:36894 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:56,696 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:36894 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:44:59,744 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:36896 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:02,784 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:36902 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:05,816 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48862 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:05,826 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48874 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:08,859 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48882 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:11,897 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48894 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:14,962 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48898 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:15,805 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48898 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:17,999 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:39084 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:21,032 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:39092 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-17 16:45:22,308: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 16:45:22,309: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
uvicorn.access INFO 2024-04-17 16:45:24,069 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:39094 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:25,805 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:39094 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:27,103 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:39094 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:30,140 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:50906 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:33,179 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:50910 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:35,820 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:32770 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:36,219 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:32770 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:39,259 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:32782 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:42,291 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:32796 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:45,332 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:32808 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:45,814 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:32808 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:48,369 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:49528 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:51,409 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:49542 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:54,449 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:49548 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:55,810 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:49548 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:45:57,484 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:49548 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:00,521 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:42846 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:03,558 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:42852 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:05,812 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:51930 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:06,594 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:51930 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:09,629 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:51936 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:12,665 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:51944 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
galaxy.jobs DEBUG 2024-04-17 16:46:13,804 [pN:main.1,p:100659,tN:LocalRunner.work_thread-0] job_wrapper.finish for job 1 executed (138813.240 ms)
uvicorn.access INFO 2024-04-17 16:46:15,719 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48740 - "GET /history/current_history_json?since=2024-04-17T20:42:46.000928 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:15,780 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48740 - "GET /api/histories/d23b2492b9db9f5f/contents?v=dev&limit=1000&q=update_time-ge&qv=2024-04-17T20:42:49.088Z HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:15,833 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48742 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:15,838 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48740 - "GET /api/users/d23b2492b9db9f5f HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:15,888 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48746 - "GET /api/histories/d23b2492b9db9f5f/contents?v=dev&order=hid&offset=0&limit=100&q=deleted&qv=false&q=visible&qv=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:18,833 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48754 - "GET /history/current_history_json?since=2024-04-17T20:46:13.000759 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:21,869 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48766 - "GET /history/current_history_json?since=2024-04-17T20:46:13.000759 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:22,229 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48782 - "GET /api/users/current HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:22,255 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48776 - "GET /api/configuration HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:22,298 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48798 - "GET /api/histories?view=summary HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:22,380 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48782 - "GET /history/current_history_json HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:22,939 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48766 - "GET /api/tools/segalign/build?version=0.1.2.1+galaxy0&tool_version=0.1.2.1+galaxy0 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:24,127 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48766 - "GET /api/tools/segalign/citations HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:24,141 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48766 - "GET /static/dist/CitationJS.bundled.js HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:24,902 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48766 - "GET /history/current_history_json?since=2024-04-17T20:46:13.000759 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:25,130 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48766 - "GET /static/dist/56d4c7ce2d3591a02107.gif HTTP/1.1" 304
uvicorn.access INFO 2024-04-17 16:46:25,811 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48766 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:26,581 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48766 - "POST /api/tools/segalign/build HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:27,963 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:48766 - "GET /history/current_history_json?since=2024-04-17T20:46:13.000759 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:31,000 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:60936 - "GET /history/current_history_json?since=2024-04-17T20:46:13.000759 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:34,050 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:60952 - "GET /history/current_history_json?since=2024-04-17T20:46:13.000759 HTTP/1.1" 200
galaxy.tools INFO 2024-04-17 16:46:35,234 [pN:main.1,p:100659,tN:WSGI_3] Validated and populated state for tool request (26.011 ms)
galaxy.tools.actions INFO 2024-04-17 16:46:35,258 [pN:main.1,p:100659,tN:WSGI_3] Handled output named output1 for tool CONVERTER_gz_to_uncompressed (1.010 ms)
galaxy.tools.actions INFO 2024-04-17 16:46:35,258 [pN:main.1,p:100659,tN:WSGI_3] Added output datasets to history (0.253 ms)
galaxy.tools.actions INFO 2024-04-17 16:46:35,260 [pN:main.1,p:100659,tN:WSGI_3] Setup for job Job[unflushed,tool_id=CONVERTER_gz_to_uncompressed] complete, ready to be enqueued (1.278 ms)
galaxy.tools.actions INFO 2024-04-17 16:46:35,284 [pN:main.1,p:100659,tN:WSGI_3] Flushed transaction for job Job[id=2,tool_id=CONVERTER_gz_to_uncompressed] (24.575 ms)
galaxy.web_stack.handlers INFO 2024-04-17 16:46:35,297 [pN:main.1,p:100659,tN:WSGI_3] Flushed transaction for Job[id=2,tool_id=CONVERTER_gz_to_uncompressed] (12.006 ms)
galaxy.web_stack.handlers INFO 2024-04-17 16:46:35,297 [pN:main.1,p:100659,tN:WSGI_3] (Job[id=2,tool_id=CONVERTER_gz_to_uncompressed]) Handler '_default_' assigned using 'HANDLER_ASSIGNMENT_METHODS.DB_SKIP_LOCKED' assignment method
galaxy.tools.actions INFO 2024-04-17 16:46:35,464 [pN:main.1,p:100659,tN:WSGI_3] Handled output named output1 for tool CONVERTER_gz_to_uncompressed (0.846 ms)
galaxy.tools.actions INFO 2024-04-17 16:46:35,465 [pN:main.1,p:100659,tN:WSGI_3] Added output datasets to history (0.251 ms)
galaxy.tools.actions INFO 2024-04-17 16:46:35,466 [pN:main.1,p:100659,tN:WSGI_3] Setup for job Job[unflushed,tool_id=CONVERTER_gz_to_uncompressed] complete, ready to be enqueued (1.090 ms)
galaxy.tools.actions INFO 2024-04-17 16:46:35,485 [pN:main.1,p:100659,tN:WSGI_3] Flushed transaction for job Job[id=3,tool_id=CONVERTER_gz_to_uncompressed] (19.052 ms)
galaxy.web_stack.handlers INFO 2024-04-17 16:46:35,496 [pN:main.1,p:100659,tN:WSGI_3] Flushed transaction for Job[id=3,tool_id=CONVERTER_gz_to_uncompressed] (10.959 ms)
galaxy.web_stack.handlers INFO 2024-04-17 16:46:35,496 [pN:main.1,p:100659,tN:WSGI_3] (Job[id=3,tool_id=CONVERTER_gz_to_uncompressed]) Handler '_default_' assigned using 'HANDLER_ASSIGNMENT_METHODS.DB_SKIP_LOCKED' assignment method
galaxy.security.object_wrapper WARNING 2024-04-17 16:46:35,592 [pN:main.1,p:100659,tN:WSGI_3] Unable to create dynamic subclass SafeStringWrapper__galaxy.model.none_like.None__NoneType__NotImplementedType__Number__SafeStringWrapper__ToolParameterValueWrapper__bool__bytearray__ellipsis for <class 'galaxy.model.none_like.NoneDataset'>, None: type() doesn't support MRO entry resolution; use types.new_class()
galaxy.tools.actions INFO 2024-04-17 16:46:35,596 [pN:main.1,p:100659,tN:WSGI_3] Handled output named segalign_diagonal_partition_output for tool segalign (3.076 ms)
galaxy.tools.actions INFO 2024-04-17 16:46:35,602 [pN:main.1,p:100659,tN:WSGI_3] Added output datasets to history (6.030 ms)
galaxy.tools.actions INFO 2024-04-17 16:46:35,604 [pN:main.1,p:100659,tN:WSGI_3] Setup for job Job[unflushed,tool_id=segalign] complete, ready to be enqueued (1.362 ms)
galaxy.tools.execute DEBUG 2024-04-17 16:46:35,604 [pN:main.1,p:100659,tN:WSGI_3] Tool segalign created job None (360.449 ms)
galaxy.web_stack.handlers INFO 2024-04-17 16:46:35,622 [pN:main.1,p:100659,tN:WSGI_3] (Job[id=4,tool_id=segalign]) Handler '_default_' assigned using 'HANDLER_ASSIGNMENT_METHODS.DB_SKIP_LOCKED' assignment method
galaxy.tools.execute DEBUG 2024-04-17 16:46:35,628 [pN:main.1,p:100659,tN:WSGI_3] Created 1 job(s) for tool segalign request (394.017 ms)
uvicorn.access INFO 2024-04-17 16:46:35,653 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:60952 - "POST /api/tools HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:35,689 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:55074 - "GET /static/dist/b7327582a95704df7902.png HTTP/1.1" 304
uvicorn.access INFO 2024-04-17 16:46:35,705 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:60952 - "GET /history/current_history_json?since=2024-04-17T20:46:13.000759 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:35,768 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:60952 - "GET /api/histories/d23b2492b9db9f5f/contents?v=dev&limit=1000&q=update_time-ge&qv=2024-04-17T20:46:15.726Z HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:35,859 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:60952 - "GET /api/users/d23b2492b9db9f5f HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:35,877 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:55076 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:35,910 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:55074 - "GET /api/histories/d23b2492b9db9f5f/contents?v=dev&order=hid&offset=0&limit=100&q=deleted&qv=false&q=visible&qv=true HTTP/1.1" 200
galaxy.jobs.mapper DEBUG 2024-04-17 16:46:35,917 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] (2) Mapped job to destination id: planemo_dest
galaxy.jobs.handler DEBUG 2024-04-17 16:46:35,933 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] (2) Dispatching to planemo_runner runner
galaxy.jobs DEBUG 2024-04-17 16:46:35,965 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] (2) Persisting job destination (destination id: planemo_dest)
galaxy.jobs DEBUG 2024-04-17 16:46:35,976 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] (2) Working directory for job is: /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/2
galaxy.jobs.runners DEBUG 2024-04-17 16:46:35,985 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] Job [2] queued (52.149 ms)
galaxy.jobs.handler INFO 2024-04-17 16:46:35,995 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] (2) Job dispatched
galaxy.jobs.mapper DEBUG 2024-04-17 16:46:36,022 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] (3) Mapped job to destination id: planemo_dest
galaxy.jobs.handler DEBUG 2024-04-17 16:46:36,048 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] (3) Dispatching to planemo_runner runner
galaxy.jobs DEBUG 2024-04-17 16:46:36,121 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] (3) Persisting job destination (destination id: planemo_dest)
galaxy.jobs DEBUG 2024-04-17 16:46:36,142 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] (3) Working directory for job is: /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/3
galaxy.jobs.runners DEBUG 2024-04-17 16:46:36,158 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] Job [3] queued (109.619 ms)
galaxy.jobs.handler INFO 2024-04-17 16:46:36,169 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] (3) Job dispatched
galaxy.jobs DEBUG 2024-04-17 16:46:36,255 [pN:main.1,p:100659,tN:LocalRunner.work_thread-0] Job wrapper for Job [2] prepared (211.172 ms)
galaxy.jobs.command_factory INFO 2024-04-17 16:46:36,279 [pN:main.1,p:100659,tN:LocalRunner.work_thread-0] Built script [/scratch/rico/tmp/tmp12w4107b/job_working_directory/000/2/tool_script.sh] for tool command [cp '/scratch/rico/tmp/tmp12w4107b/job_working_directory/000/2/configs/tmp4en5ovlk' 'galaxy.json' && gzip -dcf '/scratch/rico/tmp/tmp12w4107b/files/f/9/4/dataset_f942d97c-6c27-4ee4-8ad1-bb1227186612.dat' > '/scratch/rico/tmp/tmp12w4107b/job_working_directory/000/2/outputs/dataset_699bbabc-0c77-4e64-be54-3f19bdb266ac.dat']
galaxy.jobs DEBUG 2024-04-17 16:46:36,431 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] Job wrapper for Job [3] prepared (216.640 ms)
galaxy.jobs.command_factory INFO 2024-04-17 16:46:36,453 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] Built script [/scratch/rico/tmp/tmp12w4107b/job_working_directory/000/3/tool_script.sh] for tool command [cp '/scratch/rico/tmp/tmp12w4107b/job_working_directory/000/3/configs/tmpv3xndsel' 'galaxy.json' && gzip -dcf '/scratch/rico/tmp/tmp12w4107b/files/f/e/9/dataset_fe981322-ad11-477a-8c4f-623aad83cb29.dat' > '/scratch/rico/tmp/tmp12w4107b/job_working_directory/000/3/outputs/dataset_f1395052-e609-4e2b-870e-754f40477ce9.dat']
galaxy.jobs.runners DEBUG 2024-04-17 16:46:36,552 [pN:main.1,p:100659,tN:LocalRunner.work_thread-0] (2) command is: mkdir -p working outputs configs
if [ -d _working ]; then
    rm -rf working/ outputs/ configs/; cp -R _working working; cp -R _outputs outputs; cp -R _configs configs
else
    cp -R working _working; cp -R outputs _outputs; cp -R configs _configs
fi
cd working; /bin/bash /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/2/tool_script.sh > '../outputs/tool_stdout' 2> '../outputs/tool_stderr'; return_code=$?; echo $return_code > /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/2/galaxy_2.ec; cd '/scratch/rico/tmp/tmp12w4107b/job_working_directory/000/2'; 
[ "$GALAXY_VIRTUAL_ENV" = "None" ] && GALAXY_VIRTUAL_ENV="$_GALAXY_VIRTUAL_ENV"; _galaxy_setup_environment True; python metadata/set.py; sh -c "exit $return_code"
galaxy.jobs.runners.local DEBUG 2024-04-17 16:46:36,575 [pN:main.1,p:100659,tN:LocalRunner.work_thread-0] (2) executing job script: /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/2/galaxy_2.sh
galaxy.jobs.runners DEBUG 2024-04-17 16:46:36,796 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] (3) command is: mkdir -p working outputs configs
if [ -d _working ]; then
    rm -rf working/ outputs/ configs/; cp -R _working working; cp -R _outputs outputs; cp -R _configs configs
else
    cp -R working _working; cp -R outputs _outputs; cp -R configs _configs
fi
cd working; /bin/bash /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/3/tool_script.sh > '../outputs/tool_stdout' 2> '../outputs/tool_stderr'; return_code=$?; echo $return_code > /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/3/galaxy_3.ec; cd '/scratch/rico/tmp/tmp12w4107b/job_working_directory/000/3'; 
[ "$GALAXY_VIRTUAL_ENV" = "None" ] && GALAXY_VIRTUAL_ENV="$_GALAXY_VIRTUAL_ENV"; _galaxy_setup_environment True; python metadata/set.py; sh -c "exit $return_code"
galaxy.jobs.runners.local DEBUG 2024-04-17 16:46:36,817 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] (3) executing job script: /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/3/galaxy_3.sh
uvicorn.access INFO 2024-04-17 16:46:38,847 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:55092 - "GET /history/current_history_json?since=2024-04-17T20:46:35.000614 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:38,901 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:55092 - "GET /api/histories/d23b2492b9db9f5f/contents?v=dev&limit=1000&q=update_time-ge&qv=2024-04-17T20:46:35.712Z HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:38,952 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:55092 - "GET /api/users/d23b2492b9db9f5f HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:38,992 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:55098 - "GET /api/histories/d23b2492b9db9f5f/contents?v=dev&order=hid&offset=0&limit=100&q=deleted&qv=false&q=visible&qv=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:41,942 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:55100 - "GET /history/current_history_json?since=2024-04-17T20:46:36.000875 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:44,979 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:55108 - "GET /history/current_history_json?since=2024-04-17T20:46:36.000875 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:45,828 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:55108 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:48,012 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40404 - "GET /history/current_history_json?since=2024-04-17T20:46:36.000875 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:51,045 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40420 - "GET /history/current_history_json?since=2024-04-17T20:46:36.000875 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:54,082 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40422 - "GET /history/current_history_json?since=2024-04-17T20:46:36.000875 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:55,831 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40422 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:46:57,115 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40422 - "GET /history/current_history_json?since=2024-04-17T20:46:36.000875 HTTP/1.1" 200
uvicorn.access INFO 2024-04-17 16:47:00,147 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40818 - "GET /history/current_history_json?since=2024-04-17T20:46:36.000875 HTTP/1.1" 200
galaxy.jobs.runners.util.process_groups DEBUG 2024-04-17 16:47:25,303 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] check_pg(): No process found in process group 101735
galaxy.jobs.runners.local DEBUG 2024-04-17 16:47:25,305 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] execution finished: /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/3/galaxy_3.sh
galaxy.jobs DEBUG 2024-04-17 16:47:25,335 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] finish(): Moved /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/3/outputs/dataset_f1395052-e609-4e2b-870e-754f40477ce9.dat to /scratch/rico/tmp/tmp12w4107b/files/f/1/3/dataset_f1395052-e609-4e2b-870e-754f40477ce9.dat
galaxy.tool_util.provided_metadata DEBUG 2024-04-17 16:47:25,367 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] unnamed outputs [{'output1': {'name': 'mm39.fa uncompressed', 'ext': 'fasta'}}]
galaxy.model.metadata DEBUG 2024-04-17 16:47:25,391 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] loading metadata from file for: HistoryDatasetAssociation 4
galaxy.jobs DEBUG 2024-04-17 16:47:25,458 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] job_wrapper.finish for job 3 executed (133.021 ms)
galaxy.jobs.runners.util.process_groups DEBUG 2024-04-17 16:47:30,678 [pN:main.1,p:100659,tN:LocalRunner.work_thread-0] check_pg(): No process found in process group 101719
galaxy.jobs.runners.local DEBUG 2024-04-17 16:47:30,679 [pN:main.1,p:100659,tN:LocalRunner.work_thread-0] execution finished: /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/2/galaxy_2.sh
galaxy.jobs DEBUG 2024-04-17 16:47:30,708 [pN:main.1,p:100659,tN:LocalRunner.work_thread-0] finish(): Moved /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/2/outputs/dataset_699bbabc-0c77-4e64-be54-3f19bdb266ac.dat to /scratch/rico/tmp/tmp12w4107b/files/6/9/9/dataset_699bbabc-0c77-4e64-be54-3f19bdb266ac.dat
galaxy.tool_util.provided_metadata DEBUG 2024-04-17 16:47:30,740 [pN:main.1,p:100659,tN:LocalRunner.work_thread-0] unnamed outputs [{'output1': {'name': 'hg38.fa uncompressed', 'ext': 'fasta'}}]
galaxy.model.metadata DEBUG 2024-04-17 16:47:30,757 [pN:main.1,p:100659,tN:LocalRunner.work_thread-0] loading metadata from file for: HistoryDatasetAssociation 3
galaxy.jobs.mapper DEBUG 2024-04-17 16:47:30,839 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] (4) Mapped job to destination id: planemo_dest
galaxy.jobs DEBUG 2024-04-17 16:47:30,861 [pN:main.1,p:100659,tN:LocalRunner.work_thread-0] job_wrapper.finish for job 2 executed (162.272 ms)
galaxy.jobs.handler DEBUG 2024-04-17 16:47:30,867 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] (4) Dispatching to planemo_runner runner
galaxy.jobs DEBUG 2024-04-17 16:47:30,893 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] (4) Persisting job destination (destination id: planemo_dest)
galaxy.jobs DEBUG 2024-04-17 16:47:30,901 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] (4) Working directory for job is: /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/4
galaxy.jobs.runners DEBUG 2024-04-17 16:47:30,909 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] Job [4] queued (41.920 ms)
galaxy.jobs.handler INFO 2024-04-17 16:47:30,916 [pN:main.1,p:100659,tN:JobHandlerQueue.monitor_thread] (4) Job dispatched
galaxy.jobs DEBUG 2024-04-17 16:47:31,089 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] Job wrapper for Job [4] prepared (147.029 ms)
galaxy.tool_util.deps.conda_util DEBUG 2024-04-17 16:47:39,701 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] Executing command: /afs/bx.psu.edu/home/rico/miniconda3/bin/conda list -f --json conda-libmamba-solver > '/scratch/rico/tmp/tmp12w4107b/tmp/tmp840by705'
galaxy.tool_util.deps.conda_util DEBUG 2024-04-17 16:47:40,633 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] Executing command: /afs/bx.psu.edu/home/rico/miniconda3/bin/conda create -y --quiet --strict-channel-priority --solver libmamba --override-channels --channel conda-forge --channel bioconda --channel defaults --name mulled-v1-9b38334a1881060a34c5b580c790ccbdb502058fb87e60735496186b52532580 segalign-full=0.1.2.1 bashlex=0.18
Channels:
 - conda-forge
 - bioconda
 - defaults
Platform: linux-64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done

## Package Plan ##

  environment location: /afs/bx.psu.edu/home/rico/miniconda3/envs/mulled-v1-9b38334a1881060a34c5b580c790ccbdb502058fb87e60735496186b52532580

  added / updated specs:
    - bashlex=0.18
    - segalign-full=0.1.2.1


The following packages will be downloaded:

    package                    |            build
    ---------------------------|-----------------
    libsqlite-3.45.3           |       h2797004_0         840 KB  conda-forge
    ------------------------------------------------------------
                                           Total:         840 KB

The following NEW packages will be INSTALLED:

  _libgcc_mutex      conda-forge/linux-64::_libgcc_mutex-0.1-conda_forge 
  _openmp_mutex      conda-forge/linux-64::_openmp_mutex-4.5-2_gnu 
  bashlex            conda-forge/linux-64::bashlex-0.18-py312h7900ff3_1 
  bzip2              conda-forge/linux-64::bzip2-1.0.8-hd590300_5 
  ca-certificates    conda-forge/linux-64::ca-certificates-2024.2.2-hbcca054_0 
  coreutils          conda-forge/linux-64::coreutils-9.5-hd590300_0 
  cuda-version       conda-forge/noarch::cuda-version-11.8-h70ddcb2_3 
  cudatoolkit        conda-forge/linux-64::cudatoolkit-11.8.0-h4ba93d1_13 
  grep               conda-forge/linux-64::grep-3.11-he2e7a12_1 
  icu                conda-forge/linux-64::icu-73.2-h59595ed_0 
  lastz              bioconda/linux-64::lastz-1.04.22-h031d066_0 
  ld_impl_linux-64   conda-forge/linux-64::ld_impl_linux-64-2.40-h41732ed_0 
  libboost           conda-forge/linux-64::libboost-1.84.0-h8013b2b_2 
  libexpat           conda-forge/linux-64::libexpat-2.6.2-h59595ed_0 
  libffi             conda-forge/linux-64::libffi-3.4.2-h7f98852_5 
  libgcc-ng          conda-forge/linux-64::libgcc-ng-13.2.0-h807b86a_5 
  libgomp            conda-forge/linux-64::libgomp-13.2.0-h807b86a_5 
  libnsl             conda-forge/linux-64::libnsl-2.0.1-hd590300_0 
  libpng             conda-forge/linux-64::libpng-1.6.43-h2797004_0 
  libsqlite          conda-forge/linux-64::libsqlite-3.45.3-h2797004_0 
  libstdcxx-ng       conda-forge/linux-64::libstdcxx-ng-13.2.0-h7e041cc_5 
  libuuid            conda-forge/linux-64::libuuid-2.38.1-h0b41bf4_0 
  libxcrypt          conda-forge/linux-64::libxcrypt-4.4.36-hd590300_1 
  libzlib            conda-forge/linux-64::libzlib-1.2.13-hd590300_5 
  mysql-connector-c  conda-forge/linux-64::mysql-connector-c-6.1.11-h659d440_1008 
  ncurses            conda-forge/linux-64::ncurses-6.4.20240210-h59595ed_0 
  openssl            conda-forge/linux-64::openssl-3.2.1-hd590300_1 
  pcre2              conda-forge/linux-64::pcre2-10.43-hcad00b1_0 
  pip                conda-forge/noarch::pip-24.0-pyhd8ed1ab_0 
  python             conda-forge/linux-64::python-3.12.3-hab00c5b_0_cpython 
  python_abi         conda-forge/linux-64::python_abi-3.12-4_cp312 
  readline           conda-forge/linux-64::readline-8.2-h8228510_1 
  sed                conda-forge/linux-64::sed-4.8-he412f7d_0 
  segalign           conda-forge/linux-64::segalign-0.1.2.1-h232f886_0 
  segalign-full      bioconda/noarch::segalign-full-0.1.2.1-hdfd78af_0 
  setuptools         conda-forge/noarch::setuptools-69.5.1-pyhd8ed1ab_0 
  tbb                conda-forge/linux-64::tbb-2020.2-h4bd325d_4 
  tbb-devel          conda-forge/linux-64::tbb-devel-2020.2-h4bd325d_4 
  tk                 conda-forge/linux-64::tk-8.6.13-noxft_h4845f30_101 
  tzdata             conda-forge/noarch::tzdata-2024a-h0c530f3_0 
  ucsc-fatotwobit    bioconda/linux-64::ucsc-fatotwobit-455-h2a80c09_1 
  wheel              conda-forge/noarch::wheel-0.43.0-pyhd8ed1ab_1 
  xz                 conda-forge/linux-64::xz-5.2.6-h166bdaf_0 
  zstd               conda-forge/linux-64::zstd-1.5.5-hfc55251_0 


Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... 
==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-17 16:50:22,410: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 16:50:22,411: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 16:55:22,512: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 16:55:22,514: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
By downloading and using the CUDA Toolkit conda packages, you accept the terms and conditions of the CUDA End User License Agreement (EULA): https://docs.nvidia.com/cuda/eula/index.html

done
galaxy.tool_util.deps DEBUG 2024-04-17 16:56:24,634 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] Using dependency segalign-full version 0.1.2.1 of type conda
galaxy.tool_util.deps DEBUG 2024-04-17 16:56:24,634 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] Using dependency bashlex version 0.18 of type conda
galaxy.tool_util.deps DEBUG 2024-04-17 16:56:24,636 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] Using dependency segalign-full version 0.1.2.1 of type conda
galaxy.tool_util.deps DEBUG 2024-04-17 16:56:24,636 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] Using dependency bashlex version 0.18 of type conda
galaxy.jobs.command_factory INFO 2024-04-17 16:56:24,663 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] Built script [/scratch/rico/tmp/tmp12w4107b/job_working_directory/000/4/tool_script.sh] for tool command [[ "$(basename "$CONDA_DEFAULT_ENV")" = "$(basename '/afs/bx.psu.edu/home/rico/miniconda3/envs/mulled-v1-9b38334a1881060a34c5b580c790ccbdb502058fb87e60735496186b52532580')" ] || {
MAX_TRIES=3
COUNT=0
while [ $COUNT -lt $MAX_TRIES ]; do
    . '/afs/bx.psu.edu/home/rico/miniconda3/bin/activate' '/afs/bx.psu.edu/home/rico/miniconda3/envs/mulled-v1-9b38334a1881060a34c5b580c790ccbdb502058fb87e60735496186b52532580' > conda_activate.log 2>&1
    if [ $? -eq 0 ];then
        break
    else
        let COUNT=COUNT+1
        if [ $COUNT -eq $MAX_TRIES ];then
            echo "Failed to activate conda environment! Error was:"
            cat conda_activate.log
            exit 1
        fi
        sleep 10s
    fi
done
} ; [ "$(basename "$CONDA_DEFAULT_ENV")" = "$(basename '/afs/bx.psu.edu/home/rico/miniconda3/envs/mulled-v1-9b38334a1881060a34c5b580c790ccbdb502058fb87e60735496186b52532580')" ] || {
MAX_TRIES=3
COUNT=0
while [ $COUNT -lt $MAX_TRIES ]; do
    . '/afs/bx.psu.edu/home/rico/miniconda3/bin/activate' '/afs/bx.psu.edu/home/rico/miniconda3/envs/mulled-v1-9b38334a1881060a34c5b580c790ccbdb502058fb87e60735496186b52532580' > conda_activate.log 2>&1
    if [ $? -eq 0 ];then
        break
    else
        let COUNT=COUNT+1
        if [ $COUNT -eq $MAX_TRIES ];then
            echo "Failed to activate conda environment! Error was:"
            cat conda_activate.log
            exit 1
        fi
        sleep 10s
    fi
done
} ; OMP_THREAD_LIMIT=${GALAXY_SLOTS:-2}   '/scratch/rico/galaxytools/tools/segalign/run_segalign_diagonal_partition' --tool_directory '/scratch/rico/galaxytools/tools/segalign' --max_segments '20000' '/scratch/rico/tmp/tmp12w4107b/files/6/9/9/dataset_699bbabc-0c77-4e64-be54-3f19bdb266ac.dat' '/scratch/rico/tmp/tmp12w4107b/files/f/1/3/dataset_f1395052-e609-4e2b-870e-754f40477ce9.dat'   --strand 'both'     --seed '12of19' --step '1'   --xdrop '910' --hspthresh '3000'   --ydrop '9430'   --format 'maf-'   --wga_chunk_size '250000' --lastz_interval_size '10000000' --seq_block_size '500000000' --num_gpu '-1'   && '/scratch/rico/galaxytools/tools/segalign/package_output.py']
galaxy.jobs.runners DEBUG 2024-04-17 16:56:24,787 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] (4) command is: mkdir -p working outputs configs
if [ -d _working ]; then
    rm -rf working/ outputs/ configs/; cp -R _working working; cp -R _outputs outputs; cp -R _configs configs
else
    cp -R working _working; cp -R outputs _outputs; cp -R configs _configs
fi
cd working; /bin/bash /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/4/tool_script.sh > '../outputs/tool_stdout' 2> '../outputs/tool_stderr'; return_code=$?; echo $return_code > /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/4/galaxy_4.ec; 
if [ -f "/scratch/rico/tmp/tmp12w4107b/job_working_directory/000/4/working/data_package.tgz" ] ; then cp "/scratch/rico/tmp/tmp12w4107b/job_working_directory/000/4/working/data_package.tgz" "/scratch/rico/tmp/tmp12w4107b/job_working_directory/000/4/outputs/dataset_1d496340-1818-4e76-86a7-2b787301634c.dat" ; fi; cd '/scratch/rico/tmp/tmp12w4107b/job_working_directory/000/4'; 
[ "$GALAXY_VIRTUAL_ENV" = "None" ] && GALAXY_VIRTUAL_ENV="$_GALAXY_VIRTUAL_ENV"; _galaxy_setup_environment True; python metadata/set.py; sh -c "exit $return_code"
galaxy.jobs.runners.local DEBUG 2024-04-17 16:56:24,808 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] (4) executing job script: /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/4/galaxy_4.sh

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-17 17:00:22,614: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 17:00:22,615: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 17:05:22,713: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 17:05:22,715: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 17:10:22,815: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 17:10:22,817: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 17:15:22,913: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 17:15:22,914: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 17:20:23,014: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 17:20:23,016: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 17:25:23,116: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 17:25:23,118: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 17:30:23,218: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 17:30:23,219: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 17:35:23,319: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 17:35:23,320: DEBUG/MainProcess] beat: Waking up in 4.98 minutes.
[2024-04-17 17:40:22,201: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 17:40:22,213: INFO/MainProcess] Scheduler: Sending due task prune-history-audit-table (galaxy.prune_history_audit_table)
[2024-04-17 17:40:22,268: DEBUG/MainProcess] galaxy.prune_history_audit_table sent. id->a53db5e6-3ad7-463e-9c71-58b0cca1e6f9
[2024-04-17 17:40:22,269: INFO/MainProcess] Scheduler: Sending due task cleanup-short-term-storage (galaxy.cleanup_short_term_storage)
[2024-04-17 17:40:22,275: DEBUG/MainProcess] galaxy.cleanup_short_term_storage sent. id->9f43558c-252f-4782-a230-b3676057864b
[2024-04-17 17:40:22,276: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==
[2024-04-17 17:40:22,576: INFO/MainProcess] Task galaxy.prune_history_audit_table[a53db5e6-3ad7-463e-9c71-58b0cca1e6f9] received
[2024-04-17 17:40:22,577: DEBUG/MainProcess] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.prune_history_audit_table', 'a53db5e6-3ad7-463e-9c71-58b0cca1e6f9', {'lang': 'py', 'task': 'galaxy.prune_history_audit_table', 'id': 'a53db5e6-3ad7-463e-9c71-58b0cca1e6f9', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': 'a53db5e6-3ad7-463e-9c71-58b0cca1e6f9', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': 'a53db5e6-3ad7-463e-9c71-58b0cca1e6f9', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': 'd53240c6-f1d5-4de4-8451-f7dbd0211234'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': 'a53db5e6-3ad7-463e-9c71-58b0cca1e6f9', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-17 17:40:22,599: INFO/MainProcess] Task galaxy.cleanup_short_term_storage[9f43558c-252f-4782-a230-b3676057864b] received
[2024-04-17 17:40:22,599: DEBUG/MainProcess] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.cleanup_short_term_storage', '9f43558c-252f-4782-a230-b3676057864b', {'lang': 'py', 'task': 'galaxy.cleanup_short_term_storage', 'id': '9f43558c-252f-4782-a230-b3676057864b', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '9f43558c-252f-4782-a230-b3676057864b', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': '9f43558c-252f-4782-a230-b3676057864b', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '9fa55259-d6e7-4691-ae93-dfedcdf4ca9f'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': '9f43558c-252f-4782-a230-b3676057864b', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-17 17:40:23,768: DEBUG/MainProcess] python path is: /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/bin, /scratch/rico/galaxy/lib, /usr/local/lib/python38.zip, /usr/local/lib/python3.8, /usr/local/lib/python3.8/lib-dynload, /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages
[2024-04-17 17:40:23,769: DEBUG/MainProcess] python path is: /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/bin, /scratch/rico/galaxy/lib, /usr/local/lib/python38.zip, /usr/local/lib/python3.8, /usr/local/lib/python3.8/lib-dynload, /afs/bx.psu.edu/home/rico/.planemo/gx_venv_3/lib/python3.8/site-packages
[2024-04-17 17:40:23,769: DEBUG/MainProcess] Configuration directory is /scratch/rico/tmp/tmp12w4107b
[2024-04-17 17:40:23,769: DEBUG/MainProcess] Data directory is /scratch/rico/galaxy/database
[2024-04-17 17:40:23,769: DEBUG/MainProcess] Managed config directory is /scratch/rico/tmp/tmp12w4107b
[2024-04-17 17:40:23,770: DEBUG/MainProcess] Configuration directory is /scratch/rico/tmp/tmp12w4107b
[2024-04-17 17:40:23,770: DEBUG/MainProcess] Data directory is /scratch/rico/galaxy/database
[2024-04-17 17:40:23,770: DEBUG/MainProcess] Managed config directory is /scratch/rico/tmp/tmp12w4107b
[2024-04-17 17:40:23,970: WARNING/MainProcess] Option master_api_key has been deprecated in favor of bootstrap_admin_api_key
[2024-04-17 17:40:23,975: WARNING/MainProcess] Option master_api_key has been deprecated in favor of bootstrap_admin_api_key
[2024-04-17 17:40:23,978: DEBUG/MainProcess] No extra version JSON file detected at /scratch/rico/galaxy/version.json
[2024-04-17 17:40:23,978: DEBUG/MainProcess] No extra version JSON file detected at /scratch/rico/galaxy/version.json
[2024-04-17 17:40:23,982: INFO/MainProcess] Install database targeting Galaxy's database configuration.
[2024-04-17 17:40:23,985: INFO/MainProcess] Install database targeting Galaxy's database configuration.
[2024-04-17 17:40:23,986: DEBUG/main] WeblessApplicationStack initialized
[2024-04-17 17:40:23,987: DEBUG/main] WeblessApplicationStack initialized
[2024-04-17 17:40:23,993: DEBUG/main] Loading job configuration from /scratch/rico/tmp/tmp12w4107b/job_conf.xml
[2024-04-17 17:40:23,993: DEBUG/main] Loading job configuration from /scratch/rico/tmp/tmp12w4107b/job_conf.xml
[2024-04-17 17:40:23,994: DEBUG/main] Read job configuration from file: /scratch/rico/tmp/tmp12w4107b/job_conf.xml
[2024-04-17 17:40:23,994: DEBUG/main] Read job configuration from file: /scratch/rico/tmp/tmp12w4107b/job_conf.xml
[2024-04-17 17:40:24,004: INFO/main] JobConfiguration: No job handler assignment method is set, defaulting to 'HANDLER_ASSIGNMENT_METHODS.DB_SKIP_LOCKED', set the `assign_with` attribute on <handlers> to override the default
[2024-04-17 17:40:24,004: INFO/main] Job handler assignment methods set to: db-skip-locked
[2024-04-17 17:40:24,004: DEBUG/main] default set to child with id or tag 'planemo_dest'
[2024-04-17 17:40:24,004: DEBUG/main] Done loading job configuration
[2024-04-17 17:40:24,010: INFO/main] JobConfiguration: No job handler assignment method is set, defaulting to 'HANDLER_ASSIGNMENT_METHODS.DB_SKIP_LOCKED', set the `assign_with` attribute on <handlers> to override the default
[2024-04-17 17:40:24,010: INFO/main] Job handler assignment methods set to: db-skip-locked
[2024-04-17 17:40:24,010: DEBUG/main] default set to child with id or tag 'planemo_dest'
[2024-04-17 17:40:24,010: DEBUG/main] Done loading job configuration
[2024-04-17 17:40:24,144: WARNING/main] No vault configured. We recommend defining the vault_config_file setting in galaxy.yml
[2024-04-17 17:40:24,147: WARNING/main] No vault configured. We recommend defining the vault_config_file setting in galaxy.yml
[2024-04-17 17:40:24,362: DEBUG/main] Loading datatypes from /scratch/rico/galaxy/lib/galaxy/config/sample/datatypes_conf.xml.sample
[2024-04-17 17:40:24,367: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.h.
[2024-04-17 17:40:24,373: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.c.
[2024-04-17 17:40:24,378: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.cpp.
[2024-04-17 17:40:24,379: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.py.
[2024-04-17 17:40:24,379: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.go.
[2024-04-17 17:40:24,379: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.rs.
[2024-04-17 17:40:24,379: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.cs.
[2024-04-17 17:40:24,380: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension hep.root.
[2024-04-17 17:40:24,380: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:JP2 from the datatype registry for extension jp2.
[2024-04-17 17:40:24,380: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Ab1 from the datatype registry for extension ab1.
[2024-04-17 17:40:24,397: DEBUG/main] Retrieved datatype module galaxy.datatypes.assembly:Amos from the datatype registry for extension afg.
[2024-04-17 17:40:24,416: DEBUG/main] Retrieved datatype module galaxy.datatypes.goldenpath:GoldenPath from the datatype registry for extension agp.
[2024-04-17 17:40:24,417: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioComposite from the datatype registry for extension anvio_cog_profile.
[2024-04-17 17:40:24,418: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioComposite from the datatype registry for extension anvio_composite.
[2024-04-17 17:40:24,418: DEBUG/main] Loading datatypes from /scratch/rico/galaxy/lib/galaxy/config/sample/datatypes_conf.xml.sample
[2024-04-17 17:40:24,419: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Data from the datatype registry for extension anvio_classifier.
[2024-04-17 17:40:24,419: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.h.
[2024-04-17 17:40:24,419: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioContigsDB from the datatype registry for extension anvio_contigs_db.
[2024-04-17 17:40:24,420: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.c.
[2024-04-17 17:40:24,420: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioDB from the datatype registry for extension anvio_db.
[2024-04-17 17:40:24,420: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.cpp.
[2024-04-17 17:40:24,420: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioGenomesDB from the datatype registry for extension anvio_genomes_db.
[2024-04-17 17:40:24,420: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.py.
[2024-04-17 17:40:24,421: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioPanDB from the datatype registry for extension anvio_pan_db.
[2024-04-17 17:40:24,421: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.go.
[2024-04-17 17:40:24,421: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioComposite from the datatype registry for extension anvio_pfam_profile.
[2024-04-17 17:40:24,421: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.rs.
[2024-04-17 17:40:24,421: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioProfileDB from the datatype registry for extension anvio_profile_db.
[2024-04-17 17:40:24,422: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension source.cs.
[2024-04-17 17:40:24,422: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioSamplesDB from the datatype registry for extension anvio_samples_db.
[2024-04-17 17:40:24,422: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension hep.root.
[2024-04-17 17:40:24,422: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension anvio_state.
[2024-04-17 17:40:24,422: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:JP2 from the datatype registry for extension jp2.
[2024-04-17 17:40:24,423: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioStructureDB from the datatype registry for extension anvio_structure_db.
[2024-04-17 17:40:24,423: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Ab1 from the datatype registry for extension ab1.
[2024-04-17 17:40:24,423: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:TSV from the datatype registry for extension anvio_variability.
[2024-04-17 17:40:24,423: DEBUG/main] Retrieved datatype module galaxy.datatypes.assembly:Amos from the datatype registry for extension afg.
[2024-04-17 17:40:24,423: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Arff from the datatype registry for extension arff.
[2024-04-17 17:40:24,424: DEBUG/main] Retrieved datatype module galaxy.datatypes.goldenpath:GoldenPath from the datatype registry for extension agp.
[2024-04-17 17:40:24,424: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Paf from the datatype registry for extension paf.
[2024-04-17 17:40:24,424: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioComposite from the datatype registry for extension anvio_cog_profile.
[2024-04-17 17:40:24,424: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Gfa1 from the datatype registry for extension gfa1.
[2024-04-17 17:40:24,424: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioComposite from the datatype registry for extension anvio_composite.
[2024-04-17 17:40:24,424: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Gfa2 from the datatype registry for extension gfa2.
[2024-04-17 17:40:24,424: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Data from the datatype registry for extension anvio_classifier.
[2024-04-17 17:40:24,425: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:GenericAsn1 from the datatype registry for extension asn1.
[2024-04-17 17:40:24,425: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioContigsDB from the datatype registry for extension anvio_contigs_db.
[2024-04-17 17:40:24,425: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:GenericAsn1Binary from the datatype registry for extension asn1-binary.
[2024-04-17 17:40:24,425: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioDB from the datatype registry for extension anvio_db.
[2024-04-17 17:40:24,425: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Axt from the datatype registry for extension axt.
[2024-04-17 17:40:24,425: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioGenomesDB from the datatype registry for extension anvio_genomes_db.
[2024-04-17 17:40:24,425: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:FeatureLocationIndex from the datatype registry for extension fli.
[2024-04-17 17:40:24,426: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioPanDB from the datatype registry for extension anvio_pan_db.
[2024-04-17 17:40:24,426: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Bam from the datatype registry for extension bam.
[2024-04-17 17:40:24,426: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioComposite from the datatype registry for extension anvio_pfam_profile.
[2024-04-17 17:40:24,426: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension bai.
[2024-04-17 17:40:24,426: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioProfileDB from the datatype registry for extension anvio_profile_db.
[2024-04-17 17:40:24,426: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BamInputSorted from the datatype registry for extension qname_input_sorted.bam.
[2024-04-17 17:40:24,426: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioSamplesDB from the datatype registry for extension anvio_samples_db.
[2024-04-17 17:40:24,427: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BamQuerynameSorted from the datatype registry for extension qname_sorted.bam.
[2024-04-17 17:40:24,427: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension anvio_state.
[2024-04-17 17:40:24,427: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BamNative from the datatype registry for extension unsorted.bam.
[2024-04-17 17:40:24,427: DEBUG/main] Retrieved datatype module galaxy.datatypes.anvio:AnvioStructureDB from the datatype registry for extension anvio_structure_db.
[2024-04-17 17:40:24,427: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:ProBam from the datatype registry for extension probam.
[2024-04-17 17:40:24,427: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:TSV from the datatype registry for extension anvio_variability.
[2024-04-17 17:40:24,427: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CRAM from the datatype registry for extension cram.
[2024-04-17 17:40:24,427: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Arff from the datatype registry for extension arff.
[2024-04-17 17:40:24,428: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Bed from the datatype registry for extension bed.
[2024-04-17 17:40:24,428: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Paf from the datatype registry for extension paf.
[2024-04-17 17:40:24,428: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:BedGraph from the datatype registry for extension bedgraph.
[2024-04-17 17:40:24,428: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Gfa1 from the datatype registry for extension gfa1.
[2024-04-17 17:40:24,428: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:BedStrict from the datatype registry for extension bedstrict.
[2024-04-17 17:40:24,428: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Gfa2 from the datatype registry for extension gfa2.
[2024-04-17 17:40:24,429: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Bed6 from the datatype registry for extension bed6.
[2024-04-17 17:40:24,429: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:GenericAsn1 from the datatype registry for extension asn1.
[2024-04-17 17:40:24,429: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Bed12 from the datatype registry for extension bed12.
[2024-04-17 17:40:24,429: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:GenericAsn1Binary from the datatype registry for extension asn1-binary.
[2024-04-17 17:40:24,429: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:ProBed from the datatype registry for extension probed.
[2024-04-17 17:40:24,429: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Axt from the datatype registry for extension axt.
[2024-04-17 17:40:24,430: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:FeatureLocationIndex from the datatype registry for extension fli.
[2024-04-17 17:40:24,430: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Bam from the datatype registry for extension bam.
[2024-04-17 17:40:24,430: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension bai.
[2024-04-17 17:40:24,430: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BamInputSorted from the datatype registry for extension qname_input_sorted.bam.
[2024-04-17 17:40:24,430: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BamQuerynameSorted from the datatype registry for extension qname_sorted.bam.
[2024-04-17 17:40:24,430: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BamNative from the datatype registry for extension unsorted.bam.
[2024-04-17 17:40:24,430: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:ProBam from the datatype registry for extension probam.
[2024-04-17 17:40:24,430: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CRAM from the datatype registry for extension cram.
[2024-04-17 17:40:24,430: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Bed from the datatype registry for extension bed.
[2024-04-17 17:40:24,431: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:BedGraph from the datatype registry for extension bedgraph.
[2024-04-17 17:40:24,431: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:BedStrict from the datatype registry for extension bedstrict.
[2024-04-17 17:40:24,431: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Bed6 from the datatype registry for extension bed6.
[2024-04-17 17:40:24,431: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Bed12 from the datatype registry for extension bed12.
[2024-04-17 17:40:24,431: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:ProBed from the datatype registry for extension probed.
[2024-04-17 17:40:24,431: DEBUG/main] Retrieved datatype module galaxy.datatypes.chrominfo:ChromInfo from the datatype registry for extension len.
[2024-04-17 17:40:24,431: DEBUG/main] Retrieved datatype module galaxy.datatypes.chrominfo:ChromInfo from the datatype registry for extension len.
[2024-04-17 17:40:24,432: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:DAA from the datatype registry for extension daa.
[2024-04-17 17:40:24,432: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:DAA from the datatype registry for extension daa.
[2024-04-17 17:40:24,432: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RMA6 from the datatype registry for extension rma6.
[2024-04-17 17:40:24,432: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RMA6 from the datatype registry for extension rma6.
[2024-04-17 17:40:24,432: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:DMND from the datatype registry for extension dmnd.
[2024-04-17 17:40:24,432: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:DMND from the datatype registry for extension dmnd.
[2024-04-17 17:40:24,432: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Parquet from the datatype registry for extension parquet.
[2024-04-17 17:40:24,433: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Parquet from the datatype registry for extension parquet.
[2024-04-17 17:40:24,433: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Idat from the datatype registry for extension idat.
[2024-04-17 17:40:24,433: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Idat from the datatype registry for extension idat.
[2024-04-17 17:40:24,433: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BigBed from the datatype registry for extension bigbed.
[2024-04-17 17:40:24,433: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BigBed from the datatype registry for extension bigbed.
[2024-04-17 17:40:24,433: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BigWig from the datatype registry for extension bigwig.
[2024-04-17 17:40:24,433: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BigWig from the datatype registry for extension bigwig.
[2024-04-17 17:40:24,434: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension cxb.
[2024-04-17 17:40:24,434: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension cxb.
[2024-04-17 17:40:24,434: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:ChromatinInteractions from the datatype registry for extension chrint.
[2024-04-17 17:40:24,434: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:ChromatinInteractions from the datatype registry for extension chrint.
[2024-04-17 17:40:24,434: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:CSV from the datatype registry for extension csv.
[2024-04-17 17:40:24,434: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:CSV from the datatype registry for extension csv.
[2024-04-17 17:40:24,435: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:TSV from the datatype registry for extension tsv.
[2024-04-17 17:40:24,435: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:TSV from the datatype registry for extension tsv.
[2024-04-17 17:40:24,435: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:TSV from the datatype registry for extension intermine_tabular.
[2024-04-17 17:40:24,435: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:TSV from the datatype registry for extension intermine_tabular.
[2024-04-17 17:40:24,435: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:CustomTrack from the datatype registry for extension customtrack.
[2024-04-17 17:40:24,436: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:CustomTrack from the datatype registry for extension customtrack.
[2024-04-17 17:40:24,436: DEBUG/main] Retrieved datatype module galaxy.datatypes.ngsindex:BowtieColorIndex from the datatype registry for extension bowtie_color_index.
[2024-04-17 17:40:24,436: DEBUG/main] Retrieved datatype module galaxy.datatypes.ngsindex:BowtieColorIndex from the datatype registry for extension bowtie_color_index.
[2024-04-17 17:40:24,437: DEBUG/main] Retrieved datatype module galaxy.datatypes.ngsindex:BowtieBaseIndex from the datatype registry for extension bowtie_base_index.
[2024-04-17 17:40:24,437: DEBUG/main] Retrieved datatype module galaxy.datatypes.ngsindex:BowtieBaseIndex from the datatype registry for extension bowtie_base_index.
[2024-04-17 17:40:24,437: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:csFasta from the datatype registry for extension csfasta.
[2024-04-17 17:40:24,437: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:csFasta from the datatype registry for extension csfasta.
[2024-04-17 17:40:24,437: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Data from the datatype registry for extension data.
[2024-04-17 17:40:24,437: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Data from the datatype registry for extension data.
[2024-04-17 17:40:24,437: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension gz.
[2024-04-17 17:40:24,438: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension gz.
[2024-04-17 17:40:24,438: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension binary.
[2024-04-17 17:40:24,438: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension binary.
[2024-04-17 17:40:24,438: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension d3_hierarchy.
[2024-04-17 17:40:24,438: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension d3_hierarchy.
[2024-04-17 17:40:24,438: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:ImgtJson from the datatype registry for extension imgt.json.
[2024-04-17 17:40:24,439: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:ImgtJson from the datatype registry for extension imgt.json.
[2024-04-17 17:40:24,439: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:GeoJson from the datatype registry for extension geojson.
[2024-04-17 17:40:24,439: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:GeoJson from the datatype registry for extension geojson.
[2024-04-17 17:40:24,439: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension data_manager_json.
[2024-04-17 17:40:24,439: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension data_manager_json.
[2024-04-17 17:40:24,439: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:DotBracket from the datatype registry for extension dbn.
[2024-04-17 17:40:24,440: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:DotBracket from the datatype registry for extension dbn.
[2024-04-17 17:40:24,440: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension fai.
[2024-04-17 17:40:24,440: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension fai.
[2024-04-17 17:40:24,440: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Fasta from the datatype registry for extension fasta.
[2024-04-17 17:40:24,440: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Fasta from the datatype registry for extension fasta.
[2024-04-17 17:40:24,441: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Fastg from the datatype registry for extension fastg.
[2024-04-17 17:40:24,441: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Fastg from the datatype registry for extension fastg.
[2024-04-17 17:40:24,441: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Fastq from the datatype registry for extension fastq.
[2024-04-17 17:40:24,441: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Fastq from the datatype registry for extension fastq.
[2024-04-17 17:40:24,442: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:FastqSanger from the datatype registry for extension fastqsanger.
[2024-04-17 17:40:24,442: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:FastqSanger from the datatype registry for extension fastqsanger.
[2024-04-17 17:40:24,442: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:FastqSolexa from the datatype registry for extension fastqsolexa.
[2024-04-17 17:40:24,443: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:FastqSolexa from the datatype registry for extension fastqsolexa.
[2024-04-17 17:40:24,443: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:FastqCSSanger from the datatype registry for extension fastqcssanger.
[2024-04-17 17:40:24,443: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:FastqCSSanger from the datatype registry for extension fastqcssanger.
[2024-04-17 17:40:24,444: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:FastqIllumina from the datatype registry for extension fastqillumina.
[2024-04-17 17:40:24,444: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:FastqIllumina from the datatype registry for extension fastqillumina.
[2024-04-17 17:40:24,444: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:SequenceSplitLocations from the datatype registry for extension fqtoc.
[2024-04-17 17:40:24,445: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:SequenceSplitLocations from the datatype registry for extension fqtoc.
[2024-04-17 17:40:24,445: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Eland from the datatype registry for extension eland.
[2024-04-17 17:40:24,445: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Eland from the datatype registry for extension eland.
[2024-04-17 17:40:24,445: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:ElandMulti from the datatype registry for extension elandmulti.
[2024-04-17 17:40:24,445: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:ElandMulti from the datatype registry for extension elandmulti.
[2024-04-17 17:40:24,445: DEBUG/main] Retrieved datatype module galaxy.datatypes.tracks:GeneTrack from the datatype registry for extension genetrack.
[2024-04-17 17:40:24,445: DEBUG/main] Retrieved datatype module galaxy.datatypes.tracks:GeneTrack from the datatype registry for extension genetrack.
[2024-04-17 17:40:24,446: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Gff from the datatype registry for extension gff.
[2024-04-17 17:40:24,446: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Gff from the datatype registry for extension gff.
[2024-04-17 17:40:24,446: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Gff3 from the datatype registry for extension gff3.
[2024-04-17 17:40:24,446: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Gff3 from the datatype registry for extension gff3.
[2024-04-17 17:40:24,447: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Gif from the datatype registry for extension gif.
[2024-04-17 17:40:24,447: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Gif from the datatype registry for extension gif.
[2024-04-17 17:40:24,447: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Gmaj from the datatype registry for extension gmaj.zip.
[2024-04-17 17:40:24,447: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Gmaj from the datatype registry for extension gmaj.zip.
[2024-04-17 17:40:24,447: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension graph_dot.
[2024-04-17 17:40:24,448: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension graph_dot.
[2024-04-17 17:40:24,448: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Gtf from the datatype registry for extension gtf.
[2024-04-17 17:40:24,448: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Gtf from the datatype registry for extension gtf.
[2024-04-17 17:40:24,448: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension toolshed.gz.
[2024-04-17 17:40:24,448: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension toolshed.gz.
[2024-04-17 17:40:24,448: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:H5 from the datatype registry for extension h5.
[2024-04-17 17:40:24,449: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:H5 from the datatype registry for extension h5.
[2024-04-17 17:40:24,449: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:H5 from the datatype registry for extension scool.
[2024-04-17 17:40:24,449: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:H5 from the datatype registry for extension scool.
[2024-04-17 17:40:24,449: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Grib from the datatype registry for extension grib.
[2024-04-17 17:40:24,449: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Grib from the datatype registry for extension grib.
[2024-04-17 17:40:24,449: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Loom from the datatype registry for extension loom.
[2024-04-17 17:40:24,450: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Loom from the datatype registry for extension loom.
[2024-04-17 17:40:24,450: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Anndata from the datatype registry for extension h5ad.
[2024-04-17 17:40:24,450: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Anndata from the datatype registry for extension h5ad.
[2024-04-17 17:40:24,450: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:H5 from the datatype registry for extension mz5.
[2024-04-17 17:40:24,450: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:H5 from the datatype registry for extension mz5.
[2024-04-17 17:40:24,450: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension hyphy_results.json.
[2024-04-17 17:40:24,450: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension hyphy_results.json.
[2024-04-17 17:40:24,451: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension hivtrace.
[2024-04-17 17:40:24,451: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension hivtrace.
[2024-04-17 17:40:24,451: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Cool from the datatype registry for extension cool.
[2024-04-17 17:40:24,451: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Cool from the datatype registry for extension cool.
[2024-04-17 17:40:24,451: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:MCool from the datatype registry for extension mcool.
[2024-04-17 17:40:24,451: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:MCool from the datatype registry for extension mcool.
[2024-04-17 17:40:24,452: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:H5MLM from the datatype registry for extension h5mlm.
[2024-04-17 17:40:24,452: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:H5MLM from the datatype registry for extension h5mlm.
[2024-04-17 17:40:24,452: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:LudwigModel from the datatype registry for extension ludwig_model.
[2024-04-17 17:40:24,452: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:LudwigModel from the datatype registry for extension ludwig_model.
[2024-04-17 17:40:24,452: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Html from the datatype registry for extension html.
[2024-04-17 17:40:24,452: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Html from the datatype registry for extension html.
[2024-04-17 17:40:24,452: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Html from the datatype registry for extension ludwig_report.html.
[2024-04-17 17:40:24,453: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Html from the datatype registry for extension ludwig_report.html.
[2024-04-17 17:40:24,453: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Interval from the datatype registry for extension interval.
[2024-04-17 17:40:24,453: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Interval from the datatype registry for extension interval.
[2024-04-17 17:40:24,453: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension jellyfish.
[2024-04-17 17:40:24,453: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension jellyfish.
[2024-04-17 17:40:25,333: DEBUG/main] Retrieved datatype module galaxy.datatypes.isa:IsaTab from the datatype registry for extension isa-tab.
[2024-04-17 17:40:25,333: DEBUG/main] Retrieved datatype module galaxy.datatypes.isa:IsaTab from the datatype registry for extension isa-tab.
[2024-04-17 17:40:25,333: DEBUG/main] Retrieved datatype module galaxy.datatypes.isa:IsaJson from the datatype registry for extension isa-json.
[2024-04-17 17:40:25,334: DEBUG/main] Retrieved datatype module galaxy.datatypes.isa:IsaJson from the datatype registry for extension isa-json.
[2024-04-17 17:40:25,334: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension picard_interval_list.
[2024-04-17 17:40:25,334: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension picard_interval_list.
[2024-04-17 17:40:25,334: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension gatk_interval.
[2024-04-17 17:40:25,335: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension gatk_interval.
[2024-04-17 17:40:25,335: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension gatk_report.
[2024-04-17 17:40:25,336: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension gatk_report.
[2024-04-17 17:40:25,336: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension gatk_dbsnp.
[2024-04-17 17:40:25,336: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension gatk_dbsnp.
[2024-04-17 17:40:25,336: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension gatk_tranche.
[2024-04-17 17:40:25,337: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension gatk_tranche.
[2024-04-17 17:40:25,337: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension gatk_recal.
[2024-04-17 17:40:25,337: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension gatk_recal.
[2024-04-17 17:40:25,338: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension hhr.
[2024-04-17 17:40:25,338: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension hhr.
[2024-04-17 17:40:25,338: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Jpg from the datatype registry for extension jpg.
[2024-04-17 17:40:25,338: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Jpg from the datatype registry for extension jpg.
[2024-04-17 17:40:25,339: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension tiff.
[2024-04-17 17:40:25,339: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension tiff.
[2024-04-17 17:40:25,339: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension tf2.
[2024-04-17 17:40:25,339: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension tf2.
[2024-04-17 17:40:25,339: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension tf8.
[2024-04-17 17:40:25,340: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension tf8.
[2024-04-17 17:40:25,340: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension btf.
[2024-04-17 17:40:25,340: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension btf.
[2024-04-17 17:40:25,340: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension tif.
[2024-04-17 17:40:25,341: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension tif.
[2024-04-17 17:40:25,341: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension svs.
[2024-04-17 17:40:25,341: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension svs.
[2024-04-17 17:40:25,341: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension scn.
[2024-04-17 17:40:25,341: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension scn.
[2024-04-17 17:40:25,342: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension bif.
[2024-04-17 17:40:25,342: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tiff from the datatype registry for extension bif.
[2024-04-17 17:40:25,342: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:OMETiff from the datatype registry for extension ome.tiff.
[2024-04-17 17:40:25,342: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:OMETiff from the datatype registry for extension ome.tiff.
[2024-04-17 17:40:25,342: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Hamamatsu from the datatype registry for extension vms.
[2024-04-17 17:40:25,343: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Hamamatsu from the datatype registry for extension vms.
[2024-04-17 17:40:25,343: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Hamamatsu from the datatype registry for extension vmu.
[2024-04-17 17:40:25,343: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Hamamatsu from the datatype registry for extension vmu.
[2024-04-17 17:40:25,343: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Hamamatsu from the datatype registry for extension ndpi.
[2024-04-17 17:40:25,343: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Hamamatsu from the datatype registry for extension ndpi.
[2024-04-17 17:40:25,344: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Mirax from the datatype registry for extension mrxs.
[2024-04-17 17:40:25,344: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Mirax from the datatype registry for extension mrxs.
[2024-04-17 17:40:25,344: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Sakura from the datatype registry for extension svslide.
[2024-04-17 17:40:25,344: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Sakura from the datatype registry for extension svslide.
[2024-04-17 17:40:25,344: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Bmp from the datatype registry for extension bmp.
[2024-04-17 17:40:25,344: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Bmp from the datatype registry for extension bmp.
[2024-04-17 17:40:25,345: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Im from the datatype registry for extension im.
[2024-04-17 17:40:25,345: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Im from the datatype registry for extension im.
[2024-04-17 17:40:25,345: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Pcd from the datatype registry for extension pcd.
[2024-04-17 17:40:25,345: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Pcd from the datatype registry for extension pcd.
[2024-04-17 17:40:25,345: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Pcx from the datatype registry for extension pcx.
[2024-04-17 17:40:25,345: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Pcx from the datatype registry for extension pcx.
[2024-04-17 17:40:25,346: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Ppm from the datatype registry for extension ppm.
[2024-04-17 17:40:25,346: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Ppm from the datatype registry for extension ppm.
[2024-04-17 17:40:25,346: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Psd from the datatype registry for extension psd.
[2024-04-17 17:40:25,346: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Psd from the datatype registry for extension psd.
[2024-04-17 17:40:25,346: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Xbm from the datatype registry for extension xbm.
[2024-04-17 17:40:25,346: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Xbm from the datatype registry for extension xbm.
[2024-04-17 17:40:25,346: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Xpm from the datatype registry for extension xpm.
[2024-04-17 17:40:25,347: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Xpm from the datatype registry for extension xpm.
[2024-04-17 17:40:25,347: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Rgb from the datatype registry for extension rgb.
[2024-04-17 17:40:25,347: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Rgb from the datatype registry for extension rgb.
[2024-04-17 17:40:25,347: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Pbm from the datatype registry for extension pbm.
[2024-04-17 17:40:25,347: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Pbm from the datatype registry for extension pbm.
[2024-04-17 17:40:25,347: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Pgm from the datatype registry for extension pgm.
[2024-04-17 17:40:25,347: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Pgm from the datatype registry for extension pgm.
[2024-04-17 17:40:25,348: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Nrrd from the datatype registry for extension nrrd.
[2024-04-17 17:40:25,348: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Nrrd from the datatype registry for extension nrrd.
[2024-04-17 17:40:25,348: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Nrrd from the datatype registry for extension nhdr.
[2024-04-17 17:40:25,348: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Nrrd from the datatype registry for extension nhdr.
[2024-04-17 17:40:25,348: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:RNADotPlotMatrix from the datatype registry for extension rna_eps.
[2024-04-17 17:40:25,348: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:RNADotPlotMatrix from the datatype registry for extension rna_eps.
[2024-04-17 17:40:25,350: DEBUG/main] Retrieved datatype module galaxy.datatypes.qiime2:QIIME2Artifact from the datatype registry for extension qza.
[2024-04-17 17:40:25,350: DEBUG/main] Retrieved datatype module galaxy.datatypes.qiime2:QIIME2Artifact from the datatype registry for extension qza.
[2024-04-17 17:40:25,350: DEBUG/main] Retrieved datatype module galaxy.datatypes.qiime2:QIIME2Visualization from the datatype registry for extension qzv.
[2024-04-17 17:40:25,350: DEBUG/main] Retrieved datatype module galaxy.datatypes.qiime2:QIIME2Visualization from the datatype registry for extension qzv.
[2024-04-17 17:40:25,350: DEBUG/main] Retrieved datatype module galaxy.datatypes.qiime2:QIIME2Metadata from the datatype registry for extension qiime2.tabular.
[2024-04-17 17:40:25,350: DEBUG/main] Retrieved datatype module galaxy.datatypes.qiime2:QIIME2Metadata from the datatype registry for extension qiime2.tabular.
[2024-04-17 17:40:25,350: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CompressedZipArchive from the datatype registry for extension zip.
[2024-04-17 17:40:25,351: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CompressedZipArchive from the datatype registry for extension zip.
[2024-04-17 17:40:25,351: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CompressedZipArchive from the datatype registry for extension ncbi_genome_dataset.zip.
[2024-04-17 17:40:25,351: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CompressedZipArchive from the datatype registry for extension ncbi_genome_dataset.zip.
[2024-04-17 17:40:25,351: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension tar.
[2024-04-17 17:40:25,351: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension tar.
[2024-04-17 17:40:25,351: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Directory from the datatype registry for extension directory.
[2024-04-17 17:40:25,352: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Directory from the datatype registry for extension directory.
[2024-04-17 17:40:25,352: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Yaml from the datatype registry for extension yaml.
[2024-04-17 17:40:25,352: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Yaml from the datatype registry for extension yaml.
[2024-04-17 17:40:25,352: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension mrm.
[2024-04-17 17:40:25,352: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension mrm.
[2024-04-17 17:40:25,355: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Dta from the datatype registry for extension dta.
[2024-04-17 17:40:25,355: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Dta from the datatype registry for extension dta.
[2024-04-17 17:40:25,355: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Dta2d from the datatype registry for extension dta2d.
[2024-04-17 17:40:25,356: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Dta2d from the datatype registry for extension dta2d.
[2024-04-17 17:40:25,356: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Edta from the datatype registry for extension edta.
[2024-04-17 17:40:25,356: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Edta from the datatype registry for extension edta.
[2024-04-17 17:40:25,356: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PepXml from the datatype registry for extension pepxml.
[2024-04-17 17:40:25,356: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PepXml from the datatype registry for extension pepxml.
[2024-04-17 17:40:25,356: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PepXml from the datatype registry for extension raw_pepxml.
[2024-04-17 17:40:25,356: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PepXml from the datatype registry for extension raw_pepxml.
[2024-04-17 17:40:25,357: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PepXml from the datatype registry for extension peptideprophet_pepxml.
[2024-04-17 17:40:25,357: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PepXml from the datatype registry for extension peptideprophet_pepxml.
[2024-04-17 17:40:25,357: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PepXml from the datatype registry for extension interprophet_pepxml.
[2024-04-17 17:40:25,357: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PepXml from the datatype registry for extension interprophet_pepxml.
[2024-04-17 17:40:25,357: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:ProtXML from the datatype registry for extension protxml.
[2024-04-17 17:40:25,357: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:ProtXML from the datatype registry for extension protxml.
[2024-04-17 17:40:25,358: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:ParamXml from the datatype registry for extension paramxml.
[2024-04-17 17:40:25,358: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:ParamXml from the datatype registry for extension paramxml.
[2024-04-17 17:40:25,358: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Kroenik from the datatype registry for extension kroenik.
[2024-04-17 17:40:25,358: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Kroenik from the datatype registry for extension kroenik.
[2024-04-17 17:40:25,358: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PepList from the datatype registry for extension peplist.
[2024-04-17 17:40:25,359: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PepList from the datatype registry for extension peplist.
[2024-04-17 17:40:25,359: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PSMS from the datatype registry for extension psms.
[2024-04-17 17:40:25,359: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PSMS from the datatype registry for extension psms.
[2024-04-17 17:40:25,359: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PepXmlReport from the datatype registry for extension pepxml.tsv.
[2024-04-17 17:40:25,359: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PepXmlReport from the datatype registry for extension pepxml.tsv.
[2024-04-17 17:40:25,359: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:ProtXmlReport from the datatype registry for extension protxml.tsv.
[2024-04-17 17:40:25,359: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:ProtXmlReport from the datatype registry for extension protxml.tsv.
[2024-04-17 17:40:25,360: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MascotDat from the datatype registry for extension mascotdat.
[2024-04-17 17:40:25,360: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MascotDat from the datatype registry for extension mascotdat.
[2024-04-17 17:40:25,360: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MzIdentML from the datatype registry for extension mzid.
[2024-04-17 17:40:25,360: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MzIdentML from the datatype registry for extension mzid.
[2024-04-17 17:40:25,360: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:IdXML from the datatype registry for extension idxml.
[2024-04-17 17:40:25,360: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:IdXML from the datatype registry for extension idxml.
[2024-04-17 17:40:25,360: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:TandemXML from the datatype registry for extension tandem.
[2024-04-17 17:40:25,361: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:TandemXML from the datatype registry for extension tandem.
[2024-04-17 17:40:25,361: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension sirius.ms.
[2024-04-17 17:40:25,361: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension sirius.ms.
[2024-04-17 17:40:25,361: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:ThermoRAW from the datatype registry for extension thermo.raw.
[2024-04-17 17:40:25,361: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:ThermoRAW from the datatype registry for extension thermo.raw.
[2024-04-17 17:40:25,361: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BafTar from the datatype registry for extension brukerbaf.d.tar.
[2024-04-17 17:40:25,362: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BafTar from the datatype registry for extension brukerbaf.d.tar.
[2024-04-17 17:40:25,362: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:YepTar from the datatype registry for extension agilentbrukeryep.d.tar.
[2024-04-17 17:40:25,362: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:YepTar from the datatype registry for extension agilentbrukeryep.d.tar.
[2024-04-17 17:40:25,362: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:TdfTar from the datatype registry for extension brukertdf.d.tar.
[2024-04-17 17:40:25,362: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:TdfTar from the datatype registry for extension brukertdf.d.tar.
[2024-04-17 17:40:25,362: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:MassHunterTar from the datatype registry for extension agilentmasshunter.d.tar.
[2024-04-17 17:40:25,362: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:MassHunterTar from the datatype registry for extension agilentmasshunter.d.tar.
[2024-04-17 17:40:25,362: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:MassLynxTar from the datatype registry for extension watersmasslynx.raw.tar.
[2024-04-17 17:40:25,363: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:MassLynxTar from the datatype registry for extension watersmasslynx.raw.tar.
[2024-04-17 17:40:25,363: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:WiffTar from the datatype registry for extension wiff.tar.
[2024-04-17 17:40:25,363: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:WiffTar from the datatype registry for extension wiff.tar.
[2024-04-17 17:40:25,363: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Wiff2Tar from the datatype registry for extension wiff2.tar.
[2024-04-17 17:40:25,363: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Wiff2Tar from the datatype registry for extension wiff2.tar.
[2024-04-17 17:40:25,363: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MascotXML from the datatype registry for extension mascotxml.
[2024-04-17 17:40:25,363: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MascotXML from the datatype registry for extension mascotxml.
[2024-04-17 17:40:25,364: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MzTab from the datatype registry for extension mztab.
[2024-04-17 17:40:25,364: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MzTab from the datatype registry for extension mztab.
[2024-04-17 17:40:25,364: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MzTab2 from the datatype registry for extension mztab2.
[2024-04-17 17:40:25,364: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MzTab2 from the datatype registry for extension mztab2.
[2024-04-17 17:40:25,364: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MzML from the datatype registry for extension mzml.
[2024-04-17 17:40:25,364: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MzML from the datatype registry for extension mzml.
[2024-04-17 17:40:25,364: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:NmrML from the datatype registry for extension nmrml.
[2024-04-17 17:40:25,365: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:NmrML from the datatype registry for extension nmrml.
[2024-04-17 17:40:25,365: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Meryldb from the datatype registry for extension meryldb.
[2024-04-17 17:40:25,365: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Meryldb from the datatype registry for extension meryldb.
[2024-04-17 17:40:25,365: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Bref3 from the datatype registry for extension bref3.
[2024-04-17 17:40:25,365: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Bref3 from the datatype registry for extension bref3.
[2024-04-17 17:40:25,365: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Mgf from the datatype registry for extension mgf.
[2024-04-17 17:40:25,366: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Mgf from the datatype registry for extension mgf.
[2024-04-17 17:40:25,366: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Wiff from the datatype registry for extension wiff.
[2024-04-17 17:40:25,366: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Wiff from the datatype registry for extension wiff.
[2024-04-17 17:40:25,366: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Wiff2 from the datatype registry for extension wiff2.
[2024-04-17 17:40:25,366: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Wiff2 from the datatype registry for extension wiff2.
[2024-04-17 17:40:25,366: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MzXML from the datatype registry for extension mzxml.
[2024-04-17 17:40:25,366: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MzXML from the datatype registry for extension mzxml.
[2024-04-17 17:40:25,367: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MzData from the datatype registry for extension mzdata.
[2024-04-17 17:40:25,367: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MzData from the datatype registry for extension mzdata.
[2024-04-17 17:40:25,367: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Ms2 from the datatype registry for extension ms2.
[2024-04-17 17:40:25,367: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Ms2 from the datatype registry for extension ms2.
[2024-04-17 17:40:25,367: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MzQuantML from the datatype registry for extension mzq.
[2024-04-17 17:40:25,367: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:MzQuantML from the datatype registry for extension mzq.
[2024-04-17 17:40:25,367: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:SQlite from the datatype registry for extension sqlite.
[2024-04-17 17:40:25,368: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:SQlite from the datatype registry for extension sqlite.
[2024-04-17 17:40:25,368: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:MzSQlite from the datatype registry for extension mz.sqlite.
[2024-04-17 17:40:25,368: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:MzSQlite from the datatype registry for extension mz.sqlite.
[2024-04-17 17:40:25,368: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:OSW from the datatype registry for extension osw.
[2024-04-17 17:40:25,368: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:OSW from the datatype registry for extension osw.
[2024-04-17 17:40:25,368: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:PQP from the datatype registry for extension pqp.
[2024-04-17 17:40:25,368: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:PQP from the datatype registry for extension pqp.
[2024-04-17 17:40:25,369: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:TraML from the datatype registry for extension traml.
[2024-04-17 17:40:25,369: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:TraML from the datatype registry for extension traml.
[2024-04-17 17:40:25,369: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:TrafoXML from the datatype registry for extension trafoxml.
[2024-04-17 17:40:25,369: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:TrafoXML from the datatype registry for extension trafoxml.
[2024-04-17 17:40:25,369: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:FeatureXML from the datatype registry for extension featurexml.
[2024-04-17 17:40:25,369: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:FeatureXML from the datatype registry for extension featurexml.
[2024-04-17 17:40:25,369: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:ConsensusXML from the datatype registry for extension consensusxml.
[2024-04-17 17:40:25,370: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:ConsensusXML from the datatype registry for extension consensusxml.
[2024-04-17 17:40:25,370: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:UniProtXML from the datatype registry for extension uniprotxml.
[2024-04-17 17:40:25,370: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:UniProtXML from the datatype registry for extension uniprotxml.
[2024-04-17 17:40:25,370: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:XquestXML from the datatype registry for extension xquest.xml.
[2024-04-17 17:40:25,370: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:XquestXML from the datatype registry for extension xquest.xml.
[2024-04-17 17:40:25,370: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:XquestSpecXML from the datatype registry for extension spec.xml.
[2024-04-17 17:40:25,370: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:XquestSpecXML from the datatype registry for extension spec.xml.
[2024-04-17 17:40:25,371: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:QCML from the datatype registry for extension qcml.
[2024-04-17 17:40:25,371: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:QCML from the datatype registry for extension qcml.
[2024-04-17 17:40:25,371: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension mzqc.
[2024-04-17 17:40:25,371: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension mzqc.
[2024-04-17 17:40:25,371: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Msp from the datatype registry for extension msp.
[2024-04-17 17:40:25,371: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Msp from the datatype registry for extension msp.
[2024-04-17 17:40:25,372: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:SPLibNoIndex from the datatype registry for extension splib_noindex.
[2024-04-17 17:40:25,372: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:SPLibNoIndex from the datatype registry for extension splib_noindex.
[2024-04-17 17:40:25,372: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:SPLib from the datatype registry for extension splib.
[2024-04-17 17:40:25,372: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:SPLib from the datatype registry for extension splib.
[2024-04-17 17:40:25,372: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BlibSQlite from the datatype registry for extension blib.
[2024-04-17 17:40:25,372: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BlibSQlite from the datatype registry for extension blib.
[2024-04-17 17:40:25,372: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:DlibSQlite from the datatype registry for extension dlib.
[2024-04-17 17:40:25,373: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:DlibSQlite from the datatype registry for extension dlib.
[2024-04-17 17:40:25,373: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:ElibSQlite from the datatype registry for extension elib.
[2024-04-17 17:40:25,373: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:ElibSQlite from the datatype registry for extension elib.
[2024-04-17 17:40:25,373: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:XHunterAslFormat from the datatype registry for extension hlf.
[2024-04-17 17:40:25,373: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:XHunterAslFormat from the datatype registry for extension hlf.
[2024-04-17 17:40:25,373: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:IdpDB from the datatype registry for extension idpdb.
[2024-04-17 17:40:25,373: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:IdpDB from the datatype registry for extension idpdb.
[2024-04-17 17:40:25,373: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Sf3 from the datatype registry for extension sf3.
[2024-04-17 17:40:25,374: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:Sf3 from the datatype registry for extension sf3.
[2024-04-17 17:40:25,374: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension cps.
[2024-04-17 17:40:25,374: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension cps.
[2024-04-17 17:40:25,374: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:ConnectivityTable from the datatype registry for extension ct.
[2024-04-17 17:40:25,374: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:ConnectivityTable from the datatype registry for extension ct.
[2024-04-17 17:40:25,374: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:PostgresqlArchive from the datatype registry for extension postgresql.
[2024-04-17 17:40:25,374: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:PostgresqlArchive from the datatype registry for extension postgresql.
[2024-04-17 17:40:25,375: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:SearchGuiArchive from the datatype registry for extension searchgui_archive.
[2024-04-17 17:40:25,375: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:SearchGuiArchive from the datatype registry for extension searchgui_archive.
[2024-04-17 17:40:25,375: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Fast5Archive from the datatype registry for extension fast5.tar.
[2024-04-17 17:40:25,375: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Fast5Archive from the datatype registry for extension fast5.tar.
[2024-04-17 17:40:25,375: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Fast5ArchiveGz from the datatype registry for extension fast5.tar.gz.
[2024-04-17 17:40:25,375: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Fast5ArchiveGz from the datatype registry for extension fast5.tar.gz.
[2024-04-17 17:40:25,375: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Fast5ArchiveBz2 from the datatype registry for extension fast5.tar.bz2.
[2024-04-17 17:40:25,375: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Fast5ArchiveBz2 from the datatype registry for extension fast5.tar.bz2.
[2024-04-17 17:40:25,376: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension peptideshaker_archive.
[2024-04-17 17:40:25,376: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension peptideshaker_archive.
[2024-04-17 17:40:25,376: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension percin.
[2024-04-17 17:40:25,376: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension percin.
[2024-04-17 17:40:25,376: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:GenericXml from the datatype registry for extension percout.
[2024-04-17 17:40:25,377: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:GenericXml from the datatype registry for extension percout.
[2024-04-17 17:40:25,377: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension hardklor.
[2024-04-17 17:40:25,377: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension hardklor.
[2024-04-17 17:40:25,377: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension kronik.
[2024-04-17 17:40:25,377: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension kronik.
[2024-04-17 17:40:25,378: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:ImzML from the datatype registry for extension imzml.
[2024-04-17 17:40:25,378: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:ImzML from the datatype registry for extension imzml.
[2024-04-17 17:40:25,378: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Analyze75 from the datatype registry for extension analyze75.
[2024-04-17 17:40:25,378: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Analyze75 from the datatype registry for extension analyze75.
[2024-04-17 17:40:25,378: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Nifti1 from the datatype registry for extension nii1.
[2024-04-17 17:40:25,378: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Nifti1 from the datatype registry for extension nii1.
[2024-04-17 17:40:25,379: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Nifti2 from the datatype registry for extension nii2.
[2024-04-17 17:40:25,379: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Nifti2 from the datatype registry for extension nii2.
[2024-04-17 17:40:25,379: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Gifti from the datatype registry for extension gii.
[2024-04-17 17:40:25,379: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Gifti from the datatype registry for extension gii.
[2024-04-17 17:40:25,380: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tck from the datatype registry for extension tck.
[2024-04-17 17:40:25,380: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Tck from the datatype registry for extension tck.
[2024-04-17 17:40:25,380: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Trk from the datatype registry for extension trk.
[2024-04-17 17:40:25,380: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Trk from the datatype registry for extension trk.
[2024-04-17 17:40:25,380: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Mrc2014 from the datatype registry for extension mrc.
[2024-04-17 17:40:25,380: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Mrc2014 from the datatype registry for extension mrc.
[2024-04-17 17:40:25,380: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Star from the datatype registry for extension star.
[2024-04-17 17:40:25,381: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Star from the datatype registry for extension star.
[2024-04-17 17:40:25,381: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PEFF from the datatype registry for extension peff.
[2024-04-17 17:40:25,381: DEBUG/main] Retrieved datatype module galaxy.datatypes.proteomics:PEFF from the datatype registry for extension peff.
[2024-04-17 17:40:25,381: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension toml.
[2024-04-17 17:40:25,381: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension toml.
[2024-04-17 17:40:25,382: DEBUG/main] Retrieved datatype module galaxy.datatypes.flow:FCS from the datatype registry for extension fcs.
[2024-04-17 17:40:25,382: DEBUG/main] Retrieved datatype module galaxy.datatypes.flow:FCS from the datatype registry for extension fcs.
[2024-04-17 17:40:25,382: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowtext.
[2024-04-17 17:40:25,382: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowtext.
[2024-04-17 17:40:25,382: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowclr.
[2024-04-17 17:40:25,383: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowclr.
[2024-04-17 17:40:25,383: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowmfi.
[2024-04-17 17:40:25,383: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowmfi.
[2024-04-17 17:40:25,383: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowstat1.
[2024-04-17 17:40:25,384: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowstat1.
[2024-04-17 17:40:25,384: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowstat2.
[2024-04-17 17:40:25,384: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowstat2.
[2024-04-17 17:40:25,384: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowstat3.
[2024-04-17 17:40:25,384: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowstat3.
[2024-04-17 17:40:25,385: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowscore.
[2024-04-17 17:40:25,385: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension flowscore.
[2024-04-17 17:40:25,385: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension flowframe.
[2024-04-17 17:40:25,385: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension flowframe.
[2024-04-17 17:40:25,385: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension fsom.
[2024-04-17 17:40:25,386: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension fsom.
[2024-04-17 17:40:25,386: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension flowset.
[2024-04-17 17:40:25,386: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension flowset.
[2024-04-17 17:40:25,386: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension metacyto_clr.txt.
[2024-04-17 17:40:25,386: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension metacyto_clr.txt.
[2024-04-17 17:40:25,387: DEBUG/main] Retrieved datatype module galaxy.datatypes.metacyto:mSummary from the datatype registry for extension metacyto_summary.txt.
[2024-04-17 17:40:25,387: DEBUG/main] Retrieved datatype module galaxy.datatypes.metacyto:mSummary from the datatype registry for extension metacyto_summary.txt.
[2024-04-17 17:40:25,387: DEBUG/main] Retrieved datatype module galaxy.datatypes.metacyto:mStats from the datatype registry for extension metacyto_stats.txt.
[2024-04-17 17:40:25,388: DEBUG/main] Retrieved datatype module galaxy.datatypes.metacyto:mStats from the datatype registry for extension metacyto_stats.txt.
[2024-04-17 17:40:25,388: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension deeptools_compute_matrix_archive.
[2024-04-17 17:40:25,388: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension deeptools_compute_matrix_archive.
[2024-04-17 17:40:25,388: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension deeptools_coverage_matrix.
[2024-04-17 17:40:25,388: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension deeptools_coverage_matrix.
[2024-04-17 17:40:25,388: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:NetCDF from the datatype registry for extension netcdf.
[2024-04-17 17:40:25,389: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:NetCDF from the datatype registry for extension netcdf.
[2024-04-17 17:40:25,389: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Eps from the datatype registry for extension eps.
[2024-04-17 17:40:25,389: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Eps from the datatype registry for extension eps.
[2024-04-17 17:40:25,389: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Rast from the datatype registry for extension rast.
[2024-04-17 17:40:25,389: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Rast from the datatype registry for extension rast.
[2024-04-17 17:40:25,389: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Laj from the datatype registry for extension laj.
[2024-04-17 17:40:25,389: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Laj from the datatype registry for extension laj.
[2024-04-17 17:40:25,390: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Lav from the datatype registry for extension lav.
[2024-04-17 17:40:25,390: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Lav from the datatype registry for extension lav.
[2024-04-17 17:40:25,390: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Maf from the datatype registry for extension maf.
[2024-04-17 17:40:25,390: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Maf from the datatype registry for extension maf.
[2024-04-17 17:40:25,390: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:MafCustomTrack from the datatype registry for extension mafcustomtrack.
[2024-04-17 17:40:25,390: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:MafCustomTrack from the datatype registry for extension mafcustomtrack.
[2024-04-17 17:40:25,390: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:MatrixMarket from the datatype registry for extension mtx.
[2024-04-17 17:40:25,391: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:MatrixMarket from the datatype registry for extension mtx.
[2024-04-17 17:40:25,391: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:CMAP from the datatype registry for extension cmap.
[2024-04-17 17:40:25,391: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:CMAP from the datatype registry for extension cmap.
[2024-04-17 17:40:25,391: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:ENCODEPeak from the datatype registry for extension encodepeak.
[2024-04-17 17:40:25,391: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:ENCODEPeak from the datatype registry for extension encodepeak.
[2024-04-17 17:40:25,391: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Pdf from the datatype registry for extension pdf.
[2024-04-17 17:40:25,392: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Pdf from the datatype registry for extension pdf.
[2024-04-17 17:40:25,392: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Pileup from the datatype registry for extension pileup.
[2024-04-17 17:40:25,392: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Pileup from the datatype registry for extension pileup.
[2024-04-17 17:40:25,392: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Psl from the datatype registry for extension psl.
[2024-04-17 17:40:25,392: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Psl from the datatype registry for extension psl.
[2024-04-17 17:40:25,392: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Obo from the datatype registry for extension obo.
[2024-04-17 17:40:25,392: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Obo from the datatype registry for extension obo.
[2024-04-17 17:40:25,393: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:Owl from the datatype registry for extension owl.
[2024-04-17 17:40:25,393: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:Owl from the datatype registry for extension owl.
[2024-04-17 17:40:25,393: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Png from the datatype registry for extension png.
[2024-04-17 17:40:25,393: DEBUG/main] Retrieved datatype module galaxy.datatypes.images:Png from the datatype registry for extension png.
[2024-04-17 17:40:25,393: DEBUG/main] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScore from the datatype registry for extension qual.
[2024-04-17 17:40:25,393: DEBUG/main] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScore from the datatype registry for extension qual.
[2024-04-17 17:40:25,393: DEBUG/main] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScoreSolexa from the datatype registry for extension qualsolexa.
[2024-04-17 17:40:25,393: DEBUG/main] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScoreSolexa from the datatype registry for extension qualsolexa.
[2024-04-17 17:40:25,394: DEBUG/main] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScoreIllumina from the datatype registry for extension qualillumina.
[2024-04-17 17:40:25,394: DEBUG/main] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScoreIllumina from the datatype registry for extension qualillumina.
[2024-04-17 17:40:25,394: DEBUG/main] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScoreSOLiD from the datatype registry for extension qualsolid.
[2024-04-17 17:40:25,394: DEBUG/main] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScoreSOLiD from the datatype registry for extension qualsolid.
[2024-04-17 17:40:25,394: DEBUG/main] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScore454 from the datatype registry for extension qual454.
[2024-04-17 17:40:25,394: DEBUG/main] Retrieved datatype module galaxy.datatypes.qualityscore:QualityScore454 from the datatype registry for extension qual454.
[2024-04-17 17:40:25,394: DEBUG/main] Retrieved datatype module galaxy.datatypes.assembly:Roadmaps from the datatype registry for extension roadmaps.
[2024-04-17 17:40:25,394: DEBUG/main] Retrieved datatype module galaxy.datatypes.assembly:Roadmaps from the datatype registry for extension roadmaps.
[2024-04-17 17:40:25,395: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Sam from the datatype registry for extension sam.
[2024-04-17 17:40:25,395: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Sam from the datatype registry for extension sam.
[2024-04-17 17:40:25,395: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Scf from the datatype registry for extension scf.
[2024-04-17 17:40:25,395: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Scf from the datatype registry for extension scf.
[2024-04-17 17:40:25,395: DEBUG/main] Retrieved datatype module galaxy.datatypes.assembly:Sequences from the datatype registry for extension sequences.
[2024-04-17 17:40:25,395: DEBUG/main] Retrieved datatype module galaxy.datatypes.assembly:Sequences from the datatype registry for extension sequences.
[2024-04-17 17:40:25,396: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:SnpEffDb from the datatype registry for extension snpeffdb.
[2024-04-17 17:40:25,396: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:SnpEffDb from the datatype registry for extension snpeffdb.
[2024-04-17 17:40:25,396: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:SnpSiftDbNSFP from the datatype registry for extension snpsiftdbnsfp.
[2024-04-17 17:40:25,396: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:SnpSiftDbNSFP from the datatype registry for extension snpsiftdbnsfp.
[2024-04-17 17:40:25,396: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension dbnsfp.tabular.
[2024-04-17 17:40:25,396: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension dbnsfp.tabular.
[2024-04-17 17:40:25,397: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Sff from the datatype registry for extension sff.
[2024-04-17 17:40:25,397: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Sff from the datatype registry for extension sff.
[2024-04-17 17:40:25,397: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Sra from the datatype registry for extension sra.
[2024-04-17 17:40:25,397: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Sra from the datatype registry for extension sra.
[2024-04-17 17:40:25,397: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:SraManifest from the datatype registry for extension sra_manifest.tabular.
[2024-04-17 17:40:25,397: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:SraManifest from the datatype registry for extension sra_manifest.tabular.
[2024-04-17 17:40:25,397: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:GenericXml from the datatype registry for extension svg.
[2024-04-17 17:40:25,398: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:GenericXml from the datatype registry for extension svg.
[2024-04-17 17:40:25,398: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Taxonomy from the datatype registry for extension taxonomy.
[2024-04-17 17:40:25,398: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Taxonomy from the datatype registry for extension taxonomy.
[2024-04-17 17:40:25,398: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension tabular.
[2024-04-17 17:40:25,398: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension tabular.
[2024-04-17 17:40:25,399: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:TwoBit from the datatype registry for extension twobit.
[2024-04-17 17:40:25,399: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:TwoBit from the datatype registry for extension twobit.
[2024-04-17 17:40:25,399: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:SQmass from the datatype registry for extension sqmass.
[2024-04-17 17:40:25,399: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:SQmass from the datatype registry for extension sqmass.
[2024-04-17 17:40:25,399: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:GeminiSQLite from the datatype registry for extension gemini.sqlite.
[2024-04-17 17:40:25,399: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:GeminiSQLite from the datatype registry for extension gemini.sqlite.
[2024-04-17 17:40:25,399: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:ChiraSQLite from the datatype registry for extension chira.sqlite.
[2024-04-17 17:40:25,400: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:ChiraSQLite from the datatype registry for extension chira.sqlite.
[2024-04-17 17:40:25,400: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CuffDiffSQlite from the datatype registry for extension cuffdiff.sqlite.
[2024-04-17 17:40:25,400: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CuffDiffSQlite from the datatype registry for extension cuffdiff.sqlite.
[2024-04-17 17:40:25,400: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:GAFASQLite from the datatype registry for extension gafa.sqlite.
[2024-04-17 17:40:25,400: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:GAFASQLite from the datatype registry for extension gafa.sqlite.
[2024-04-17 17:40:25,400: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:NcbiTaxonomySQlite from the datatype registry for extension ncbitaxonomy.sqlite.
[2024-04-17 17:40:25,401: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:NcbiTaxonomySQlite from the datatype registry for extension ncbitaxonomy.sqlite.
[2024-04-17 17:40:25,401: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension txt.
[2024-04-17 17:40:25,401: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension txt.
[2024-04-17 17:40:25,401: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:LineCount from the datatype registry for extension linecount.
[2024-04-17 17:40:25,402: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:LineCount from the datatype registry for extension linecount.
[2024-04-17 17:40:25,402: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:MemePsp from the datatype registry for extension memepsp.
[2024-04-17 17:40:25,402: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:MemePsp from the datatype registry for extension memepsp.
[2024-04-17 17:40:25,402: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:MEMEXml from the datatype registry for extension memexml.
[2024-04-17 17:40:25,402: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:MEMEXml from the datatype registry for extension memexml.
[2024-04-17 17:40:25,402: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:CisML from the datatype registry for extension cisml.
[2024-04-17 17:40:25,403: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:CisML from the datatype registry for extension cisml.
[2024-04-17 17:40:25,403: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:GenericXml from the datatype registry for extension xml.
[2024-04-17 17:40:25,403: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:GenericXml from the datatype registry for extension xml.
[2024-04-17 17:40:25,403: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:GenericXml from the datatype registry for extension xsd.
[2024-04-17 17:40:25,403: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:GenericXml from the datatype registry for extension xsd.
[2024-04-17 17:40:25,404: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:Dzi from the datatype registry for extension dzi.
[2024-04-17 17:40:25,404: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:Dzi from the datatype registry for extension dzi.
[2024-04-17 17:40:25,404: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Vcf from the datatype registry for extension vcf.
[2024-04-17 17:40:25,404: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Vcf from the datatype registry for extension vcf.
[2024-04-17 17:40:25,404: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Bcf from the datatype registry for extension bcf.
[2024-04-17 17:40:25,405: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Bcf from the datatype registry for extension bcf.
[2024-04-17 17:40:25,405: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Bcf from the datatype registry for extension bcf_bgzip.
[2024-04-17 17:40:25,405: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Bcf from the datatype registry for extension bcf_bgzip.
[2024-04-17 17:40:25,405: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BcfUncompressed from the datatype registry for extension bcf_uncompressed.
[2024-04-17 17:40:25,406: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:BcfUncompressed from the datatype registry for extension bcf_uncompressed.
[2024-04-17 17:40:25,406: DEBUG/main] Retrieved datatype module galaxy.datatypes.assembly:Velvet from the datatype registry for extension velvet.
[2024-04-17 17:40:25,406: DEBUG/main] Retrieved datatype module galaxy.datatypes.assembly:Velvet from the datatype registry for extension velvet.
[2024-04-17 17:40:25,406: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Wiggle from the datatype registry for extension wig.
[2024-04-17 17:40:25,407: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:Wiggle from the datatype registry for extension wig.
[2024-04-17 17:40:25,407: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension interval_index.
[2024-04-17 17:40:25,407: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension interval_index.
[2024-04-17 17:40:25,407: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension odgi.
[2024-04-17 17:40:25,408: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension odgi.
[2024-04-17 17:40:25,408: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension vg.
[2024-04-17 17:40:25,409: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:CompressedArchive from the datatype registry for extension vg.
[2024-04-17 17:40:25,409: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension xg.
[2024-04-17 17:40:25,409: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension xg.
[2024-04-17 17:40:25,410: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension protobuf2.
[2024-04-17 17:40:25,410: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension protobuf2.
[2024-04-17 17:40:25,410: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension protobuf3.
[2024-04-17 17:40:25,410: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension protobuf3.
[2024-04-17 17:40:25,410: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension onnx.
[2024-04-17 17:40:25,411: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension onnx.
[2024-04-17 17:40:25,411: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension tabix.
[2024-04-17 17:40:25,411: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension tabix.
[2024-04-17 17:40:25,411: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:IntervalTabix from the datatype registry for extension interval_tabix.gz.
[2024-04-17 17:40:25,411: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:IntervalTabix from the datatype registry for extension interval_tabix.gz.
[2024-04-17 17:40:25,411: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:JuicerMediumTabix from the datatype registry for extension juicer_medium_tabix.gz.
[2024-04-17 17:40:25,412: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:JuicerMediumTabix from the datatype registry for extension juicer_medium_tabix.gz.
[2024-04-17 17:40:25,412: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:BedTabix from the datatype registry for extension bed_tabix.gz.
[2024-04-17 17:40:25,412: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:BedTabix from the datatype registry for extension bed_tabix.gz.
[2024-04-17 17:40:25,412: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:GffTabix from the datatype registry for extension gff_tabix.gz.
[2024-04-17 17:40:25,412: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:GffTabix from the datatype registry for extension gff_tabix.gz.
[2024-04-17 17:40:25,412: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension bgzip.
[2024-04-17 17:40:25,413: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension bgzip.
[2024-04-17 17:40:25,413: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:VcfGz from the datatype registry for extension vcf_bgzip.
[2024-04-17 17:40:25,413: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:VcfGz from the datatype registry for extension vcf_bgzip.
[2024-04-17 17:40:25,413: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension bus.
[2024-04-17 17:40:25,413: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension bus.
[2024-04-17 17:40:25,413: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension kallisto.idx.
[2024-04-17 17:40:25,414: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension kallisto.idx.
[2024-04-17 17:40:25,414: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:Phyloxml from the datatype registry for extension phyloxml.
[2024-04-17 17:40:25,414: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:Phyloxml from the datatype registry for extension phyloxml.
[2024-04-17 17:40:25,414: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Newick from the datatype registry for extension newick.
[2024-04-17 17:40:25,414: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Newick from the datatype registry for extension newick.
[2024-04-17 17:40:25,414: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Newick from the datatype registry for extension nhx.
[2024-04-17 17:40:25,415: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Newick from the datatype registry for extension nhx.
[2024-04-17 17:40:25,415: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Nexus from the datatype registry for extension nex.
[2024-04-17 17:40:25,415: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Nexus from the datatype registry for extension nex.
[2024-04-17 17:40:25,415: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:IQTree from the datatype registry for extension iqtree.
[2024-04-17 17:40:25,415: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:IQTree from the datatype registry for extension iqtree.
[2024-04-17 17:40:25,418: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:SquareDistanceMatrix from the datatype registry for extension mldist.
[2024-04-17 17:40:25,418: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:SquareDistanceMatrix from the datatype registry for extension mldist.
[2024-04-17 17:40:25,421: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Affybatch from the datatype registry for extension affybatch.
[2024-04-17 17:40:25,421: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Affybatch from the datatype registry for extension affybatch.
[2024-04-17 17:40:25,422: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Eigenstratgeno from the datatype registry for extension eigenstratgeno.
[2024-04-17 17:40:25,422: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Eigenstratgeno from the datatype registry for extension eigenstratgeno.
[2024-04-17 17:40:25,422: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Eigenstratpca from the datatype registry for extension eigenstratpca.
[2024-04-17 17:40:25,422: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Eigenstratpca from the datatype registry for extension eigenstratpca.
[2024-04-17 17:40:25,422: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Eset from the datatype registry for extension eset.
[2024-04-17 17:40:25,422: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Eset from the datatype registry for extension eset.
[2024-04-17 17:40:25,423: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Fped from the datatype registry for extension fped.
[2024-04-17 17:40:25,423: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Fped from the datatype registry for extension fped.
[2024-04-17 17:40:25,423: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Fphe from the datatype registry for extension fphe.
[2024-04-17 17:40:25,423: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Fphe from the datatype registry for extension fphe.
[2024-04-17 17:40:25,423: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:GenomeGraphs from the datatype registry for extension gg.
[2024-04-17 17:40:25,423: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:GenomeGraphs from the datatype registry for extension gg.
[2024-04-17 17:40:25,424: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:ldIndep from the datatype registry for extension ldindep.
[2024-04-17 17:40:25,424: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:ldIndep from the datatype registry for extension ldindep.
[2024-04-17 17:40:25,424: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:MAlist from the datatype registry for extension malist.
[2024-04-17 17:40:25,424: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:MAlist from the datatype registry for extension malist.
[2024-04-17 17:40:25,424: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Lped from the datatype registry for extension lped.
[2024-04-17 17:40:25,424: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Lped from the datatype registry for extension lped.
[2024-04-17 17:40:25,425: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Pbed from the datatype registry for extension pbed.
[2024-04-17 17:40:25,425: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Pbed from the datatype registry for extension pbed.
[2024-04-17 17:40:25,425: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Pheno from the datatype registry for extension pheno.
[2024-04-17 17:40:25,425: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Pheno from the datatype registry for extension pheno.
[2024-04-17 17:40:25,425: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Pphe from the datatype registry for extension pphe.
[2024-04-17 17:40:25,425: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Pphe from the datatype registry for extension pphe.
[2024-04-17 17:40:25,426: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:RexpBase from the datatype registry for extension rexpbase.
[2024-04-17 17:40:25,426: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:RexpBase from the datatype registry for extension rexpbase.
[2024-04-17 17:40:25,426: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Rgenetics from the datatype registry for extension rgenetics.
[2024-04-17 17:40:25,426: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Rgenetics from the datatype registry for extension rgenetics.
[2024-04-17 17:40:25,426: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Snptest from the datatype registry for extension snptest.
[2024-04-17 17:40:25,426: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:Snptest from the datatype registry for extension snptest.
[2024-04-17 17:40:25,426: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:SNPMatrix from the datatype registry for extension snpmatrix.
[2024-04-17 17:40:25,427: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:SNPMatrix from the datatype registry for extension snpmatrix.
[2024-04-17 17:40:25,427: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:ExcelXls from the datatype registry for extension xls.
[2024-04-17 17:40:25,427: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:ExcelXls from the datatype registry for extension xls.
[2024-04-17 17:40:25,427: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Ipynb from the datatype registry for extension ipynb.
[2024-04-17 17:40:25,427: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Ipynb from the datatype registry for extension ipynb.
[2024-04-17 17:40:25,427: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension json.
[2024-04-17 17:40:25,427: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Json from the datatype registry for extension json.
[2024-04-17 17:40:25,428: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:ExpressionJson from the datatype registry for extension expression.json.
[2024-04-17 17:40:25,428: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:ExpressionJson from the datatype registry for extension expression.json.
[2024-04-17 17:40:25,429: DEBUG/main] Retrieved datatype module galaxy.datatypes.graph:Xgmml from the datatype registry for extension xgmml.
[2024-04-17 17:40:25,430: DEBUG/main] Retrieved datatype module galaxy.datatypes.graph:Xgmml from the datatype registry for extension xgmml.
[2024-04-17 17:40:25,430: DEBUG/main] Retrieved datatype module galaxy.datatypes.graph:Sif from the datatype registry for extension sif.
[2024-04-17 17:40:25,430: DEBUG/main] Retrieved datatype module galaxy.datatypes.graph:Sif from the datatype registry for extension sif.
[2024-04-17 17:40:25,431: DEBUG/main] Retrieved datatype module galaxy.datatypes.triples:Triples from the datatype registry for extension triples.
[2024-04-17 17:40:25,431: DEBUG/main] Retrieved datatype module galaxy.datatypes.triples:Triples from the datatype registry for extension triples.
[2024-04-17 17:40:25,431: DEBUG/main] Retrieved datatype module galaxy.datatypes.triples:HDT from the datatype registry for extension hdt.
[2024-04-17 17:40:25,432: DEBUG/main] Retrieved datatype module galaxy.datatypes.triples:HDT from the datatype registry for extension hdt.
[2024-04-17 17:40:25,432: DEBUG/main] Retrieved datatype module galaxy.datatypes.triples:NTriples from the datatype registry for extension nt.
[2024-04-17 17:40:25,432: DEBUG/main] Retrieved datatype module galaxy.datatypes.triples:NTriples from the datatype registry for extension nt.
[2024-04-17 17:40:25,432: DEBUG/main] Retrieved datatype module galaxy.datatypes.triples:N3 from the datatype registry for extension n3.
[2024-04-17 17:40:25,432: DEBUG/main] Retrieved datatype module galaxy.datatypes.triples:N3 from the datatype registry for extension n3.
[2024-04-17 17:40:25,432: DEBUG/main] Retrieved datatype module galaxy.datatypes.triples:Turtle from the datatype registry for extension ttl.
[2024-04-17 17:40:25,432: DEBUG/main] Retrieved datatype module galaxy.datatypes.triples:Turtle from the datatype registry for extension ttl.
[2024-04-17 17:40:25,433: DEBUG/main] Retrieved datatype module galaxy.datatypes.triples:Rdf from the datatype registry for extension rdf.
[2024-04-17 17:40:25,433: DEBUG/main] Retrieved datatype module galaxy.datatypes.triples:Rdf from the datatype registry for extension rdf.
[2024-04-17 17:40:25,433: DEBUG/main] Retrieved datatype module galaxy.datatypes.triples:Jsonld from the datatype registry for extension jsonld.
[2024-04-17 17:40:25,433: DEBUG/main] Retrieved datatype module galaxy.datatypes.triples:Jsonld from the datatype registry for extension jsonld.
[2024-04-17 17:40:25,433: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:ExcelXls from the datatype registry for extension excel.xls.
[2024-04-17 17:40:25,433: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:ExcelXls from the datatype registry for extension excel.xls.
[2024-04-17 17:40:25,433: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Xlsx from the datatype registry for extension xlsx.
[2024-04-17 17:40:25,434: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Xlsx from the datatype registry for extension xlsx.
[2024-04-17 17:40:25,434: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension btwisted.
[2024-04-17 17:40:25,434: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension btwisted.
[2024-04-17 17:40:25,434: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cai.
[2024-04-17 17:40:25,434: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cai.
[2024-04-17 17:40:25,434: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cat_db.
[2024-04-17 17:40:25,435: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cat_db.
[2024-04-17 17:40:25,435: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension charge.
[2024-04-17 17:40:25,435: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension charge.
[2024-04-17 17:40:25,435: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension checktrans.
[2024-04-17 17:40:25,435: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension checktrans.
[2024-04-17 17:40:25,435: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension chips.
[2024-04-17 17:40:25,436: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension chips.
[2024-04-17 17:40:25,436: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension codcmp.
[2024-04-17 17:40:25,436: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension codcmp.
[2024-04-17 17:40:25,436: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension coderet.
[2024-04-17 17:40:25,436: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension coderet.
[2024-04-17 17:40:25,436: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension compseq.
[2024-04-17 17:40:25,437: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension compseq.
[2024-04-17 17:40:25,437: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cpgplot.
[2024-04-17 17:40:25,437: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cpgplot.
[2024-04-17 17:40:25,437: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cpgreport.
[2024-04-17 17:40:25,437: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cpgreport.
[2024-04-17 17:40:25,437: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cusp.
[2024-04-17 17:40:25,438: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cusp.
[2024-04-17 17:40:25,438: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cut.
[2024-04-17 17:40:25,438: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension cut.
[2024-04-17 17:40:25,438: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension dan.
[2024-04-17 17:40:25,438: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension dan.
[2024-04-17 17:40:25,438: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension digest.
[2024-04-17 17:40:25,439: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension digest.
[2024-04-17 17:40:25,439: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension dreg.
[2024-04-17 17:40:25,439: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension dreg.
[2024-04-17 17:40:25,439: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension einverted.
[2024-04-17 17:40:25,439: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension einverted.
[2024-04-17 17:40:25,440: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension epestfind.
[2024-04-17 17:40:25,440: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension epestfind.
[2024-04-17 17:40:25,440: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension equicktandem.
[2024-04-17 17:40:25,440: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension equicktandem.
[2024-04-17 17:40:25,440: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension est2genome.
[2024-04-17 17:40:25,441: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension est2genome.
[2024-04-17 17:40:25,441: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension etandem.
[2024-04-17 17:40:25,441: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension etandem.
[2024-04-17 17:40:25,441: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension freak.
[2024-04-17 17:40:25,441: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension freak.
[2024-04-17 17:40:25,441: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension fuzznuc.
[2024-04-17 17:40:25,442: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension fuzznuc.
[2024-04-17 17:40:25,442: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension fuzzpro.
[2024-04-17 17:40:25,442: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension fuzzpro.
[2024-04-17 17:40:25,442: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension fuzztran.
[2024-04-17 17:40:25,442: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension fuzztran.
[2024-04-17 17:40:25,442: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension garnier.
[2024-04-17 17:40:25,443: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension garnier.
[2024-04-17 17:40:25,443: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension geecee.
[2024-04-17 17:40:25,443: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension geecee.
[2024-04-17 17:40:25,443: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension helixturnhelix.
[2024-04-17 17:40:25,443: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension helixturnhelix.
[2024-04-17 17:40:25,443: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension hmoment.
[2024-04-17 17:40:25,444: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension hmoment.
[2024-04-17 17:40:25,444: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension isochore.
[2024-04-17 17:40:25,444: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension isochore.
[2024-04-17 17:40:25,444: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension match.
[2024-04-17 17:40:25,444: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension match.
[2024-04-17 17:40:25,444: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension nametable.
[2024-04-17 17:40:25,444: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension nametable.
[2024-04-17 17:40:25,445: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension needle.
[2024-04-17 17:40:25,445: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension needle.
[2024-04-17 17:40:25,445: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension newcpgreport.
[2024-04-17 17:40:25,445: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension newcpgreport.
[2024-04-17 17:40:25,445: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension newcpgseek.
[2024-04-17 17:40:25,445: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension newcpgseek.
[2024-04-17 17:40:25,446: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension noreturn.
[2024-04-17 17:40:25,446: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension noreturn.
[2024-04-17 17:40:25,446: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension palindrome.
[2024-04-17 17:40:25,446: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension palindrome.
[2024-04-17 17:40:25,446: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pepcoil.
[2024-04-17 17:40:25,446: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pepcoil.
[2024-04-17 17:40:25,447: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pepinfo.
[2024-04-17 17:40:25,447: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pepinfo.
[2024-04-17 17:40:25,447: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pepstats.
[2024-04-17 17:40:25,447: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pepstats.
[2024-04-17 17:40:25,447: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension polydot.
[2024-04-17 17:40:25,447: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension polydot.
[2024-04-17 17:40:25,448: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension preg.
[2024-04-17 17:40:25,448: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension preg.
[2024-04-17 17:40:25,448: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension prettyseq.
[2024-04-17 17:40:25,448: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension prettyseq.
[2024-04-17 17:40:25,448: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension primersearch.
[2024-04-17 17:40:25,448: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension primersearch.
[2024-04-17 17:40:25,449: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension showfeat.
[2024-04-17 17:40:25,449: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension showfeat.
[2024-04-17 17:40:25,449: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension showorf.
[2024-04-17 17:40:25,449: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension showorf.
[2024-04-17 17:40:25,449: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension sixpack.
[2024-04-17 17:40:25,450: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension sixpack.
[2024-04-17 17:40:25,450: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension strider.
[2024-04-17 17:40:25,450: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension strider.
[2024-04-17 17:40:25,450: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension supermatcher.
[2024-04-17 17:40:25,450: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension supermatcher.
[2024-04-17 17:40:25,450: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension syco.
[2024-04-17 17:40:25,451: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension syco.
[2024-04-17 17:40:25,451: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension textsearch.
[2024-04-17 17:40:25,451: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension textsearch.
[2024-04-17 17:40:25,451: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension vectorstrip.
[2024-04-17 17:40:25,451: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension vectorstrip.
[2024-04-17 17:40:25,452: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension wobble.
[2024-04-17 17:40:25,452: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension wobble.
[2024-04-17 17:40:25,452: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension wordcount.
[2024-04-17 17:40:25,452: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension wordcount.
[2024-04-17 17:40:25,452: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension dbmotif.
[2024-04-17 17:40:25,452: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension dbmotif.
[2024-04-17 17:40:25,453: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension diffseq.
[2024-04-17 17:40:25,453: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension diffseq.
[2024-04-17 17:40:25,453: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension excel.
[2024-04-17 17:40:25,453: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension excel.
[2024-04-17 17:40:25,453: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension feattable.
[2024-04-17 17:40:25,453: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension feattable.
[2024-04-17 17:40:25,453: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension motif.
[2024-04-17 17:40:25,454: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension motif.
[2024-04-17 17:40:25,454: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension regions.
[2024-04-17 17:40:25,454: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension regions.
[2024-04-17 17:40:25,454: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension seqtable.
[2024-04-17 17:40:25,454: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension seqtable.
[2024-04-17 17:40:25,454: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension simple.
[2024-04-17 17:40:25,455: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension simple.
[2024-04-17 17:40:25,455: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension table.
[2024-04-17 17:40:25,455: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension table.
[2024-04-17 17:40:25,455: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension tagseq.
[2024-04-17 17:40:25,455: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension tagseq.
[2024-04-17 17:40:25,455: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension acedb.
[2024-04-17 17:40:25,456: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension acedb.
[2024-04-17 17:40:25,456: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension clustal.
[2024-04-17 17:40:25,456: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension clustal.
[2024-04-17 17:40:25,456: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension codata.
[2024-04-17 17:40:25,456: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension codata.
[2024-04-17 17:40:25,456: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension embl.
[2024-04-17 17:40:25,457: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension embl.
[2024-04-17 17:40:25,457: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension fitch.
[2024-04-17 17:40:25,457: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension fitch.
[2024-04-17 17:40:25,457: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension gcg.
[2024-04-17 17:40:25,457: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension gcg.
[2024-04-17 17:40:25,457: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Genbank from the datatype registry for extension genbank.
[2024-04-17 17:40:25,458: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Genbank from the datatype registry for extension genbank.
[2024-04-17 17:40:25,458: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension hennig86.
[2024-04-17 17:40:25,458: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension hennig86.
[2024-04-17 17:40:25,458: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension ig.
[2024-04-17 17:40:25,459: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension ig.
[2024-04-17 17:40:25,459: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension jackknifer.
[2024-04-17 17:40:25,459: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension jackknifer.
[2024-04-17 17:40:25,459: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension jackknifernon.
[2024-04-17 17:40:25,459: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension jackknifernon.
[2024-04-17 17:40:25,459: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension mega.
[2024-04-17 17:40:25,459: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension mega.
[2024-04-17 17:40:25,460: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension meganon.
[2024-04-17 17:40:25,460: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension meganon.
[2024-04-17 17:40:25,460: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension ncbi.
[2024-04-17 17:40:25,460: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension ncbi.
[2024-04-17 17:40:25,460: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension nexus.
[2024-04-17 17:40:25,460: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension nexus.
[2024-04-17 17:40:25,461: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension nexusnon.
[2024-04-17 17:40:25,461: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension nexusnon.
[2024-04-17 17:40:25,462: DEBUG/main] Retrieved datatype module galaxy.datatypes.phylip:Phylip from the datatype registry for extension phylip.
[2024-04-17 17:40:25,462: DEBUG/main] Retrieved datatype module galaxy.datatypes.phylip:Phylip from the datatype registry for extension phylip.
[2024-04-17 17:40:25,462: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension phylipnon.
[2024-04-17 17:40:25,462: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension phylipnon.
[2024-04-17 17:40:25,462: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pir.
[2024-04-17 17:40:25,462: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pir.
[2024-04-17 17:40:25,463: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension staden.
[2024-04-17 17:40:25,463: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension staden.
[2024-04-17 17:40:25,463: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension swiss.
[2024-04-17 17:40:25,463: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension swiss.
[2024-04-17 17:40:25,465: DEBUG/main] Retrieved datatype module galaxy.datatypes.msa:Msf from the datatype registry for extension msf.
[2024-04-17 17:40:25,465: DEBUG/main] Retrieved datatype module galaxy.datatypes.msa:Msf from the datatype registry for extension msf.
[2024-04-17 17:40:25,465: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx0.
[2024-04-17 17:40:25,465: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx0.
[2024-04-17 17:40:25,465: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx1.
[2024-04-17 17:40:25,465: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx1.
[2024-04-17 17:40:25,466: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx10.
[2024-04-17 17:40:25,466: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx10.
[2024-04-17 17:40:25,466: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx2.
[2024-04-17 17:40:25,466: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx2.
[2024-04-17 17:40:25,466: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx3.
[2024-04-17 17:40:25,466: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension markx3.
[2024-04-17 17:40:25,467: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pair.
[2024-04-17 17:40:25,467: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension pair.
[2024-04-17 17:40:25,467: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension score.
[2024-04-17 17:40:25,467: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension score.
[2024-04-17 17:40:25,467: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension srs.
[2024-04-17 17:40:25,467: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension srs.
[2024-04-17 17:40:25,468: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension srspair.
[2024-04-17 17:40:25,468: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension srspair.
[2024-04-17 17:40:25,469: DEBUG/main] Retrieved datatype module galaxy.datatypes.annotation:SnapHmm from the datatype registry for extension snaphmm.
[2024-04-17 17:40:25,469: DEBUG/main] Retrieved datatype module galaxy.datatypes.annotation:SnapHmm from the datatype registry for extension snaphmm.
[2024-04-17 17:40:25,469: DEBUG/main] Retrieved datatype module galaxy.datatypes.annotation:Augustus from the datatype registry for extension augustus.
[2024-04-17 17:40:25,469: DEBUG/main] Retrieved datatype module galaxy.datatypes.annotation:Augustus from the datatype registry for extension augustus.
[2024-04-17 17:40:25,469: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:ICM from the datatype registry for extension icm.
[2024-04-17 17:40:25,469: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:ICM from the datatype registry for extension icm.
[2024-04-17 17:40:25,470: DEBUG/main] Retrieved datatype module galaxy.datatypes.msa:InfernalCM from the datatype registry for extension cm.
[2024-04-17 17:40:25,470: DEBUG/main] Retrieved datatype module galaxy.datatypes.msa:InfernalCM from the datatype registry for extension cm.
[2024-04-17 17:40:25,470: DEBUG/main] Retrieved datatype module galaxy.datatypes.msa:Hmmer2 from the datatype registry for extension hmm2.
[2024-04-17 17:40:25,470: DEBUG/main] Retrieved datatype module galaxy.datatypes.msa:Hmmer2 from the datatype registry for extension hmm2.
[2024-04-17 17:40:25,470: DEBUG/main] Retrieved datatype module galaxy.datatypes.msa:Hmmer3 from the datatype registry for extension hmm3.
[2024-04-17 17:40:25,470: DEBUG/main] Retrieved datatype module galaxy.datatypes.msa:Hmmer3 from the datatype registry for extension hmm3.
[2024-04-17 17:40:25,470: DEBUG/main] Retrieved datatype module galaxy.datatypes.msa:Stockholm_1_0 from the datatype registry for extension stockholm.
[2024-04-17 17:40:25,471: DEBUG/main] Retrieved datatype module galaxy.datatypes.msa:Stockholm_1_0 from the datatype registry for extension stockholm.
[2024-04-17 17:40:25,471: DEBUG/main] Retrieved datatype module galaxy.datatypes.msa:MauveXmfa from the datatype registry for extension xmfa.
[2024-04-17 17:40:25,471: DEBUG/main] Retrieved datatype module galaxy.datatypes.msa:MauveXmfa from the datatype registry for extension xmfa.
[2024-04-17 17:40:25,472: DEBUG/main] Retrieved datatype module galaxy.datatypes.microarrays:Cel from the datatype registry for extension cel.
[2024-04-17 17:40:25,472: DEBUG/main] Retrieved datatype module galaxy.datatypes.microarrays:Cel from the datatype registry for extension cel.
[2024-04-17 17:40:25,472: DEBUG/main] Retrieved datatype module galaxy.datatypes.microarrays:Gpr from the datatype registry for extension gpr.
[2024-04-17 17:40:25,472: DEBUG/main] Retrieved datatype module galaxy.datatypes.microarrays:Gpr from the datatype registry for extension gpr.
[2024-04-17 17:40:25,472: DEBUG/main] Retrieved datatype module galaxy.datatypes.microarrays:Gal from the datatype registry for extension gal.
[2024-04-17 17:40:25,472: DEBUG/main] Retrieved datatype module galaxy.datatypes.microarrays:Gal from the datatype registry for extension gal.
[2024-04-17 17:40:25,473: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension rds.
[2024-04-17 17:40:25,473: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension rds.
[2024-04-17 17:40:25,473: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension phyloseq.
[2024-04-17 17:40:25,473: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension phyloseq.
[2024-04-17 17:40:25,473: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.
[2024-04-17 17:40:25,473: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.
[2024-04-17 17:40:25,474: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.sce.
[2024-04-17 17:40:25,474: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.sce.
[2024-04-17 17:40:25,474: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.raw.
[2024-04-17 17:40:25,474: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.raw.
[2024-04-17 17:40:25,474: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.msnbase.raw.
[2024-04-17 17:40:25,474: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.msnbase.raw.
[2024-04-17 17:40:25,475: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.findchrompeaks.
[2024-04-17 17:40:25,475: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.findchrompeaks.
[2024-04-17 17:40:25,475: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.group.
[2024-04-17 17:40:25,475: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.group.
[2024-04-17 17:40:25,475: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.retcor.
[2024-04-17 17:40:25,476: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.retcor.
[2024-04-17 17:40:25,476: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.fillpeaks.
[2024-04-17 17:40:25,476: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.xcms.fillpeaks.
[2024-04-17 17:40:25,476: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.camera.positive.
[2024-04-17 17:40:25,476: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.camera.positive.
[2024-04-17 17:40:25,476: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.camera.negative.
[2024-04-17 17:40:25,477: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.camera.negative.
[2024-04-17 17:40:25,477: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.camera.quick.
[2024-04-17 17:40:25,477: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RData from the datatype registry for extension rdata.camera.quick.
[2024-04-17 17:40:25,478: DEBUG/main] Retrieved datatype module galaxy.datatypes.hdf5:HDF5SummarizedExperiment from the datatype registry for extension rdata.se.
[2024-04-17 17:40:25,478: DEBUG/main] Retrieved datatype module galaxy.datatypes.hdf5:HDF5SummarizedExperiment from the datatype registry for extension rdata.se.
[2024-04-17 17:40:25,478: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension rdock_as.
[2024-04-17 17:40:25,478: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension rdock_as.
[2024-04-17 17:40:25,478: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:OxliCountGraph from the datatype registry for extension oxlicg.
[2024-04-17 17:40:25,479: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:OxliCountGraph from the datatype registry for extension oxlicg.
[2024-04-17 17:40:25,479: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:OxliNodeGraph from the datatype registry for extension oxling.
[2024-04-17 17:40:25,479: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:OxliNodeGraph from the datatype registry for extension oxling.
[2024-04-17 17:40:25,479: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:OxliTagSet from the datatype registry for extension oxlits.
[2024-04-17 17:40:25,479: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:OxliTagSet from the datatype registry for extension oxlits.
[2024-04-17 17:40:25,479: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:OxliStopTags from the datatype registry for extension oxlist.
[2024-04-17 17:40:25,479: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:OxliStopTags from the datatype registry for extension oxlist.
[2024-04-17 17:40:25,480: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:OxliSubset from the datatype registry for extension oxliss.
[2024-04-17 17:40:25,480: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:OxliSubset from the datatype registry for extension oxliss.
[2024-04-17 17:40:25,480: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:OxliGraphLabels from the datatype registry for extension oxligl.
[2024-04-17 17:40:25,480: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:OxliGraphLabels from the datatype registry for extension oxligl.
[2024-04-17 17:40:25,482: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:STL from the datatype registry for extension stl.
[2024-04-17 17:40:25,482: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:STL from the datatype registry for extension stl.
[2024-04-17 17:40:25,482: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:PlyAscii from the datatype registry for extension plyascii.
[2024-04-17 17:40:25,482: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:PlyAscii from the datatype registry for extension plyascii.
[2024-04-17 17:40:25,482: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:PlyBinary from the datatype registry for extension plybinary.
[2024-04-17 17:40:25,483: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:PlyBinary from the datatype registry for extension plybinary.
[2024-04-17 17:40:25,483: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:VtkAscii from the datatype registry for extension vtkascii.
[2024-04-17 17:40:25,483: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:VtkAscii from the datatype registry for extension vtkascii.
[2024-04-17 17:40:25,483: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:VtkBinary from the datatype registry for extension vtkbinary.
[2024-04-17 17:40:25,483: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:VtkBinary from the datatype registry for extension vtkbinary.
[2024-04-17 17:40:25,483: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Biom1 from the datatype registry for extension biom1.
[2024-04-17 17:40:25,483: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Biom1 from the datatype registry for extension biom1.
[2024-04-17 17:40:25,484: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Biom2 from the datatype registry for extension biom2.
[2024-04-17 17:40:25,484: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Biom2 from the datatype registry for extension biom2.
[2024-04-17 17:40:25,484: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:MashSketch from the datatype registry for extension msh.
[2024-04-17 17:40:25,484: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:MashSketch from the datatype registry for extension msh.
[2024-04-17 17:40:25,484: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:ScIdx from the datatype registry for extension scidx.
[2024-04-17 17:40:25,484: DEBUG/main] Retrieved datatype module galaxy.datatypes.interval:ScIdx from the datatype registry for extension scidx.
[2024-04-17 17:40:25,488: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:SMILES from the datatype registry for extension smi.
[2024-04-17 17:40:25,488: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:SMILES from the datatype registry for extension smi.
[2024-04-17 17:40:25,488: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:SDF from the datatype registry for extension sdf.
[2024-04-17 17:40:25,488: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:SDF from the datatype registry for extension sdf.
[2024-04-17 17:40:25,489: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:InChI from the datatype registry for extension inchi.
[2024-04-17 17:40:25,489: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:InChI from the datatype registry for extension inchi.
[2024-04-17 17:40:25,489: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:MOL from the datatype registry for extension mol.
[2024-04-17 17:40:25,489: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:MOL from the datatype registry for extension mol.
[2024-04-17 17:40:25,489: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:MOL2 from the datatype registry for extension mol2.
[2024-04-17 17:40:25,489: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:MOL2 from the datatype registry for extension mol2.
[2024-04-17 17:40:25,490: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:CML from the datatype registry for extension cml.
[2024-04-17 17:40:25,490: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:CML from the datatype registry for extension cml.
[2024-04-17 17:40:25,490: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:FPS from the datatype registry for extension fps.
[2024-04-17 17:40:25,490: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:FPS from the datatype registry for extension fps.
[2024-04-17 17:40:25,490: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:OBFS from the datatype registry for extension obfs.
[2024-04-17 17:40:25,490: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:OBFS from the datatype registry for extension obfs.
[2024-04-17 17:40:25,491: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:DRF from the datatype registry for extension drf.
[2024-04-17 17:40:25,491: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:DRF from the datatype registry for extension drf.
[2024-04-17 17:40:25,491: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:PHAR from the datatype registry for extension phar.
[2024-04-17 17:40:25,491: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:PHAR from the datatype registry for extension phar.
[2024-04-17 17:40:25,491: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:PDB from the datatype registry for extension pdb.
[2024-04-17 17:40:25,491: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:PDB from the datatype registry for extension pdb.
[2024-04-17 17:40:25,492: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:PDBQT from the datatype registry for extension pdbqt.
[2024-04-17 17:40:25,492: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:PDBQT from the datatype registry for extension pdbqt.
[2024-04-17 17:40:25,492: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:PQR from the datatype registry for extension pqr.
[2024-04-17 17:40:25,492: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:PQR from the datatype registry for extension pqr.
[2024-04-17 17:40:25,492: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:Cell from the datatype registry for extension cell.
[2024-04-17 17:40:25,492: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:Cell from the datatype registry for extension cell.
[2024-04-17 17:40:25,492: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:CIF from the datatype registry for extension cif.
[2024-04-17 17:40:25,493: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:CIF from the datatype registry for extension cif.
[2024-04-17 17:40:25,493: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:XYZ from the datatype registry for extension xyz.
[2024-04-17 17:40:25,493: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:XYZ from the datatype registry for extension xyz.
[2024-04-17 17:40:25,493: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:ExtendedXYZ from the datatype registry for extension extxyz.
[2024-04-17 17:40:25,493: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:ExtendedXYZ from the datatype registry for extension extxyz.
[2024-04-17 17:40:25,493: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Trr from the datatype registry for extension trr.
[2024-04-17 17:40:25,493: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Trr from the datatype registry for extension trr.
[2024-04-17 17:40:25,494: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Dcd from the datatype registry for extension dcd.
[2024-04-17 17:40:25,494: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Dcd from the datatype registry for extension dcd.
[2024-04-17 17:40:25,494: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension top.
[2024-04-17 17:40:25,494: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension top.
[2024-04-17 17:40:25,494: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension prmtop.
[2024-04-17 17:40:25,495: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension prmtop.
[2024-04-17 17:40:25,495: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension itp.
[2024-04-17 17:40:25,495: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension itp.
[2024-04-17 17:40:25,495: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension mdp.
[2024-04-17 17:40:25,495: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension mdp.
[2024-04-17 17:40:25,495: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension ndx.
[2024-04-17 17:40:25,496: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension ndx.
[2024-04-17 17:40:25,496: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension xvg.
[2024-04-17 17:40:25,496: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension xvg.
[2024-04-17 17:40:25,496: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Xtc from the datatype registry for extension xtc.
[2024-04-17 17:40:25,496: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Xtc from the datatype registry for extension xtc.
[2024-04-17 17:40:25,497: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Cpt from the datatype registry for extension cpt.
[2024-04-17 17:40:25,497: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Cpt from the datatype registry for extension cpt.
[2024-04-17 17:40:25,497: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Edr from the datatype registry for extension edr.
[2024-04-17 17:40:25,497: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Edr from the datatype registry for extension edr.
[2024-04-17 17:40:25,497: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension tpr.
[2024-04-17 17:40:25,497: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension tpr.
[2024-04-17 17:40:25,498: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:GRO from the datatype registry for extension gro.
[2024-04-17 17:40:25,498: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:GRO from the datatype registry for extension gro.
[2024-04-17 17:40:25,498: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension inpcrd.
[2024-04-17 17:40:25,498: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension inpcrd.
[2024-04-17 17:40:25,498: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Vel from the datatype registry for extension vel.
[2024-04-17 17:40:25,498: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Vel from the datatype registry for extension vel.
[2024-04-17 17:40:25,498: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:grd from the datatype registry for extension grd.
[2024-04-17 17:40:25,499: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:grd from the datatype registry for extension grd.
[2024-04-17 17:40:25,499: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:grdtgz from the datatype registry for extension grd.tgz.
[2024-04-17 17:40:25,499: DEBUG/main] Retrieved datatype module galaxy.datatypes.molecules:grdtgz from the datatype registry for extension grd.tgz.
[2024-04-17 17:40:25,499: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Otu from the datatype registry for extension mothur.otu.
[2024-04-17 17:40:25,499: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Otu from the datatype registry for extension mothur.otu.
[2024-04-17 17:40:25,499: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Otu from the datatype registry for extension mothur.list.
[2024-04-17 17:40:25,499: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Otu from the datatype registry for extension mothur.list.
[2024-04-17 17:40:25,500: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Sabund from the datatype registry for extension mothur.sabund.
[2024-04-17 17:40:25,500: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Sabund from the datatype registry for extension mothur.sabund.
[2024-04-17 17:40:25,500: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Sabund from the datatype registry for extension mothur.rabund.
[2024-04-17 17:40:25,500: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Sabund from the datatype registry for extension mothur.rabund.
[2024-04-17 17:40:25,500: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:GroupAbund from the datatype registry for extension mothur.shared.
[2024-04-17 17:40:25,501: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:GroupAbund from the datatype registry for extension mothur.shared.
[2024-04-17 17:40:25,501: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:GroupAbund from the datatype registry for extension mothur.relabund.
[2024-04-17 17:40:25,501: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:GroupAbund from the datatype registry for extension mothur.relabund.
[2024-04-17 17:40:25,501: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Names from the datatype registry for extension mothur.names.
[2024-04-17 17:40:25,501: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Names from the datatype registry for extension mothur.names.
[2024-04-17 17:40:25,501: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Group from the datatype registry for extension mothur.design.
[2024-04-17 17:40:25,501: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Group from the datatype registry for extension mothur.design.
[2024-04-17 17:40:25,502: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Summary from the datatype registry for extension mothur.summary.
[2024-04-17 17:40:25,502: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Summary from the datatype registry for extension mothur.summary.
[2024-04-17 17:40:25,502: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Group from the datatype registry for extension mothur.groups.
[2024-04-17 17:40:25,502: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Group from the datatype registry for extension mothur.groups.
[2024-04-17 17:40:25,502: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Oligos from the datatype registry for extension mothur.oligos.
[2024-04-17 17:40:25,502: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Oligos from the datatype registry for extension mothur.oligos.
[2024-04-17 17:40:25,502: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Fasta from the datatype registry for extension mothur.align.
[2024-04-17 17:40:25,503: DEBUG/main] Retrieved datatype module galaxy.datatypes.sequence:Fasta from the datatype registry for extension mothur.align.
[2024-04-17 17:40:25,503: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:AccNos from the datatype registry for extension mothur.accnos.
[2024-04-17 17:40:25,503: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:AccNos from the datatype registry for extension mothur.accnos.
[2024-04-17 17:40:25,503: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:AccNos from the datatype registry for extension mothur.otulabels.
[2024-04-17 17:40:25,503: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:AccNos from the datatype registry for extension mothur.otulabels.
[2024-04-17 17:40:25,503: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension mothur.otu.corr.
[2024-04-17 17:40:25,503: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension mothur.otu.corr.
[2024-04-17 17:40:25,504: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:SecondaryStructureMap from the datatype registry for extension mothur.map.
[2024-04-17 17:40:25,504: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:SecondaryStructureMap from the datatype registry for extension mothur.map.
[2024-04-17 17:40:25,504: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:AlignCheck from the datatype registry for extension mothur.align.check.
[2024-04-17 17:40:25,504: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:AlignCheck from the datatype registry for extension mothur.align.check.
[2024-04-17 17:40:25,504: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:AlignReport from the datatype registry for extension mothur.align.report.
[2024-04-17 17:40:25,504: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:AlignReport from the datatype registry for extension mothur.align.report.
[2024-04-17 17:40:25,504: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:LaneMask from the datatype registry for extension mothur.filter.
[2024-04-17 17:40:25,505: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:LaneMask from the datatype registry for extension mothur.filter.
[2024-04-17 17:40:25,505: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:DistanceMatrix from the datatype registry for extension mothur.dist.
[2024-04-17 17:40:25,505: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:DistanceMatrix from the datatype registry for extension mothur.dist.
[2024-04-17 17:40:25,505: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension mothur.tre.
[2024-04-17 17:40:25,505: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension mothur.tre.
[2024-04-17 17:40:25,505: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:PairwiseDistanceMatrix from the datatype registry for extension mothur.pair.dist.
[2024-04-17 17:40:25,505: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:PairwiseDistanceMatrix from the datatype registry for extension mothur.pair.dist.
[2024-04-17 17:40:25,506: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:SquareDistanceMatrix from the datatype registry for extension mothur.square.dist.
[2024-04-17 17:40:25,506: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:SquareDistanceMatrix from the datatype registry for extension mothur.square.dist.
[2024-04-17 17:40:25,506: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:LowerTriangleDistanceMatrix from the datatype registry for extension mothur.lower.dist.
[2024-04-17 17:40:25,506: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:LowerTriangleDistanceMatrix from the datatype registry for extension mothur.lower.dist.
[2024-04-17 17:40:25,506: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:RefTaxonomy from the datatype registry for extension mothur.ref.taxonomy.
[2024-04-17 17:40:25,506: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:RefTaxonomy from the datatype registry for extension mothur.ref.taxonomy.
[2024-04-17 17:40:25,506: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:RefTaxonomy from the datatype registry for extension mothur.seq.taxonomy.
[2024-04-17 17:40:25,506: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:RefTaxonomy from the datatype registry for extension mothur.seq.taxonomy.
[2024-04-17 17:40:25,507: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:RefTaxonomy from the datatype registry for extension mothur.rdp.taxonomy.
[2024-04-17 17:40:25,507: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:RefTaxonomy from the datatype registry for extension mothur.rdp.taxonomy.
[2024-04-17 17:40:25,507: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:ConsensusTaxonomy from the datatype registry for extension mothur.cons.taxonomy.
[2024-04-17 17:40:25,507: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:ConsensusTaxonomy from the datatype registry for extension mothur.cons.taxonomy.
[2024-04-17 17:40:25,508: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:TaxonomySummary from the datatype registry for extension mothur.tax.summary.
[2024-04-17 17:40:25,508: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:TaxonomySummary from the datatype registry for extension mothur.tax.summary.
[2024-04-17 17:40:25,508: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Frequency from the datatype registry for extension mothur.freq.
[2024-04-17 17:40:25,508: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Frequency from the datatype registry for extension mothur.freq.
[2024-04-17 17:40:25,508: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Quantile from the datatype registry for extension mothur.quan.
[2024-04-17 17:40:25,508: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Quantile from the datatype registry for extension mothur.quan.
[2024-04-17 17:40:25,508: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Quantile from the datatype registry for extension mothur.filtered.quan.
[2024-04-17 17:40:25,509: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Quantile from the datatype registry for extension mothur.filtered.quan.
[2024-04-17 17:40:25,509: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Quantile from the datatype registry for extension mothur.masked.quan.
[2024-04-17 17:40:25,509: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Quantile from the datatype registry for extension mothur.masked.quan.
[2024-04-17 17:40:25,509: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Quantile from the datatype registry for extension mothur.filtered.masked.quan.
[2024-04-17 17:40:25,509: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Quantile from the datatype registry for extension mothur.filtered.masked.quan.
[2024-04-17 17:40:25,510: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Axes from the datatype registry for extension mothur.axes.
[2024-04-17 17:40:25,510: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:Axes from the datatype registry for extension mothur.axes.
[2024-04-17 17:40:25,510: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:SffFlow from the datatype registry for extension mothur.sff.flow.
[2024-04-17 17:40:25,510: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:SffFlow from the datatype registry for extension mothur.sff.flow.
[2024-04-17 17:40:25,510: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:CountTable from the datatype registry for extension mothur.count_table.
[2024-04-17 17:40:25,510: DEBUG/main] Retrieved datatype module galaxy.datatypes.mothur:CountTable from the datatype registry for extension mothur.count_table.
[2024-04-17 17:40:25,511: DEBUG/main] Retrieved datatype module galaxy.datatypes.neo4j:Neo4jDB from the datatype registry for extension neostore.
[2024-04-17 17:40:25,512: DEBUG/main] Retrieved datatype module galaxy.datatypes.neo4j:Neo4jDB from the datatype registry for extension neostore.
[2024-04-17 17:40:25,512: DEBUG/main] Retrieved datatype module galaxy.datatypes.neo4j:Neo4jDBzip from the datatype registry for extension neostore.zip.
[2024-04-17 17:40:25,512: DEBUG/main] Retrieved datatype module galaxy.datatypes.neo4j:Neo4jDBzip from the datatype registry for extension neostore.zip.
[2024-04-17 17:40:25,512: DEBUG/main] Retrieved datatype module galaxy.datatypes.tracks:UCSCTrackHub from the datatype registry for extension trackhub.
[2024-04-17 17:40:25,513: DEBUG/main] Retrieved datatype module galaxy.datatypes.tracks:UCSCTrackHub from the datatype registry for extension trackhub.
[2024-04-17 17:40:25,514: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:BlastXml from the datatype registry for extension blastxml.
[2024-04-17 17:40:25,514: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:BlastXml from the datatype registry for extension blastxml.
[2024-04-17 17:40:25,514: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:BlastNucDb from the datatype registry for extension blastdbn.
[2024-04-17 17:40:25,514: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:BlastNucDb from the datatype registry for extension blastdbn.
[2024-04-17 17:40:25,514: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:BlastProtDb from the datatype registry for extension blastdbp.
[2024-04-17 17:40:25,515: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:BlastProtDb from the datatype registry for extension blastdbp.
[2024-04-17 17:40:25,515: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:BlastDomainDb from the datatype registry for extension blastdbd.
[2024-04-17 17:40:25,515: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:BlastDomainDb from the datatype registry for extension blastdbd.
[2024-04-17 17:40:25,515: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:LastDb from the datatype registry for extension lastdb.
[2024-04-17 17:40:25,515: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:LastDb from the datatype registry for extension lastdb.
[2024-04-17 17:40:25,516: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:BlastNucDb5 from the datatype registry for extension blastdbn5.
[2024-04-17 17:40:25,516: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:BlastNucDb5 from the datatype registry for extension blastdbn5.
[2024-04-17 17:40:25,516: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:BlastProtDb5 from the datatype registry for extension blastdbp5.
[2024-04-17 17:40:25,516: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:BlastProtDb5 from the datatype registry for extension blastdbp5.
[2024-04-17 17:40:25,516: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:BlastDomainDb5 from the datatype registry for extension blastdbd5.
[2024-04-17 17:40:25,516: DEBUG/main] Retrieved datatype module galaxy.datatypes.blast:BlastDomainDb5 from the datatype registry for extension blastdbd5.
[2024-04-17 17:40:25,517: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:GenericAsn1 from the datatype registry for extension maskinfo-asn1.
[2024-04-17 17:40:25,517: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:GenericAsn1 from the datatype registry for extension maskinfo-asn1.
[2024-04-17 17:40:25,517: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:GenericAsn1Binary from the datatype registry for extension maskinfo-asn1-binary.
[2024-04-17 17:40:25,517: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:GenericAsn1Binary from the datatype registry for extension maskinfo-asn1-binary.
[2024-04-17 17:40:25,518: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:GenericAsn1 from the datatype registry for extension pssm-asn1.
[2024-04-17 17:40:25,518: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:GenericAsn1 from the datatype registry for extension pssm-asn1.
[2024-04-17 17:40:25,519: DEBUG/main] Retrieved datatype module galaxy.datatypes.plant_tribes:PlantTribesKsComponents from the datatype registry for extension ptkscmp.
[2024-04-17 17:40:25,519: DEBUG/main] Retrieved datatype module galaxy.datatypes.plant_tribes:PlantTribesKsComponents from the datatype registry for extension ptkscmp.
[2024-04-17 17:40:25,519: DEBUG/main] Retrieved datatype module galaxy.datatypes.plant_tribes:Smat from the datatype registry for extension smat.
[2024-04-17 17:40:25,519: DEBUG/main] Retrieved datatype module galaxy.datatypes.plant_tribes:Smat from the datatype registry for extension smat.
[2024-04-17 17:40:25,519: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:GenotypeMatrix from the datatype registry for extension alohomora_gts.
[2024-04-17 17:40:25,519: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:GenotypeMatrix from the datatype registry for extension alohomora_gts.
[2024-04-17 17:40:25,519: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension alohomora_map.
[2024-04-17 17:40:25,519: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension alohomora_map.
[2024-04-17 17:40:25,520: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension alohomora_maf.
[2024-04-17 17:40:25,520: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension alohomora_maf.
[2024-04-17 17:40:25,520: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension alohomora_ped.
[2024-04-17 17:40:25,520: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension alohomora_ped.
[2024-04-17 17:40:25,521: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension linkage_pedin.
[2024-04-17 17:40:25,521: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension linkage_pedin.
[2024-04-17 17:40:25,521: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:DataIn from the datatype registry for extension linkage_datain.
[2024-04-17 17:40:25,521: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:DataIn from the datatype registry for extension linkage_datain.
[2024-04-17 17:40:25,521: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:MarkerMap from the datatype registry for extension linkage_map.
[2024-04-17 17:40:25,521: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:MarkerMap from the datatype registry for extension linkage_map.
[2024-04-17 17:40:25,522: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension allegro_ihaplo.
[2024-04-17 17:40:25,522: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension allegro_ihaplo.
[2024-04-17 17:40:25,522: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension allegro_descent.
[2024-04-17 17:40:25,522: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension allegro_descent.
[2024-04-17 17:40:25,522: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:AllegroLOD from the datatype registry for extension allegro_fparam.
[2024-04-17 17:40:25,522: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:AllegroLOD from the datatype registry for extension allegro_fparam.
[2024-04-17 17:40:25,522: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:IdeasPre from the datatype registry for extension ideaspre.
[2024-04-17 17:40:25,522: DEBUG/main] Retrieved datatype module galaxy.datatypes.genetics:IdeasPre from the datatype registry for extension ideaspre.
[2024-04-17 17:40:25,523: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:Sbml from the datatype registry for extension sbml.
[2024-04-17 17:40:25,523: DEBUG/main] Retrieved datatype module galaxy.datatypes.xml:Sbml from the datatype registry for extension sbml.
[2024-04-17 17:40:25,524: DEBUG/main] Retrieved datatype module galaxy.datatypes.spaln:SpalnNuclDb from the datatype registry for extension spalndbnp.
[2024-04-17 17:40:25,524: DEBUG/main] Retrieved datatype module galaxy.datatypes.spaln:SpalnNuclDb from the datatype registry for extension spalndbnp.
[2024-04-17 17:40:25,524: DEBUG/main] Retrieved datatype module galaxy.datatypes.spaln:SpalnProtDb from the datatype registry for extension spalndba.
[2024-04-17 17:40:25,524: DEBUG/main] Retrieved datatype module galaxy.datatypes.spaln:SpalnProtDb from the datatype registry for extension spalndba.
[2024-04-17 17:40:25,524: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension dada2_dada.
[2024-04-17 17:40:25,524: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension dada2_dada.
[2024-04-17 17:40:25,525: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension dada2_errorrates.
[2024-04-17 17:40:25,525: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension dada2_errorrates.
[2024-04-17 17:40:25,525: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension dada2_mergepairs.
[2024-04-17 17:40:25,525: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension dada2_mergepairs.
[2024-04-17 17:40:25,526: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension dada2_sequencetable.
[2024-04-17 17:40:25,526: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension dada2_sequencetable.
[2024-04-17 17:40:25,526: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension dada2_uniques.
[2024-04-17 17:40:25,526: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension dada2_uniques.
[2024-04-17 17:40:25,526: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension ampvis2.
[2024-04-17 17:40:25,527: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:RDS from the datatype registry for extension ampvis2.
[2024-04-17 17:40:25,527: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension ckpt.
[2024-04-17 17:40:25,527: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension ckpt.
[2024-04-17 17:40:25,527: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension tgz.
[2024-04-17 17:40:25,527: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension tgz.
[2024-04-17 17:40:25,531: DEBUG/main] Retrieved datatype module galaxy.datatypes.media:Wav from the datatype registry for extension wav.
[2024-04-17 17:40:25,531: DEBUG/main] Retrieved datatype module galaxy.datatypes.media:Wav from the datatype registry for extension wav.
[2024-04-17 17:40:25,531: DEBUG/main] Retrieved datatype module galaxy.datatypes.media:Mp3 from the datatype registry for extension mp3.
[2024-04-17 17:40:25,531: DEBUG/main] Retrieved datatype module galaxy.datatypes.media:Mp3 from the datatype registry for extension mp3.
[2024-04-17 17:40:25,531: DEBUG/main] Retrieved datatype module galaxy.datatypes.media:Mkv from the datatype registry for extension mkv.
[2024-04-17 17:40:25,531: DEBUG/main] Retrieved datatype module galaxy.datatypes.media:Mkv from the datatype registry for extension mkv.
[2024-04-17 17:40:25,531: DEBUG/main] Retrieved datatype module galaxy.datatypes.media:Mp4 from the datatype registry for extension mp4.
[2024-04-17 17:40:25,532: DEBUG/main] Retrieved datatype module galaxy.datatypes.media:Mp4 from the datatype registry for extension mp4.
[2024-04-17 17:40:25,532: DEBUG/main] Retrieved datatype module galaxy.datatypes.media:Flv from the datatype registry for extension flv.
[2024-04-17 17:40:25,532: DEBUG/main] Retrieved datatype module galaxy.datatypes.media:Flv from the datatype registry for extension flv.
[2024-04-17 17:40:25,532: DEBUG/main] Retrieved datatype module galaxy.datatypes.media:Mpg from the datatype registry for extension mpg.
[2024-04-17 17:40:25,532: DEBUG/main] Retrieved datatype module galaxy.datatypes.media:Mpg from the datatype registry for extension mpg.
[2024-04-17 17:40:25,533: DEBUG/main] Retrieved datatype module galaxy.datatypes.speech:TextGrid from the datatype registry for extension textgrid.
[2024-04-17 17:40:25,533: DEBUG/main] Retrieved datatype module galaxy.datatypes.speech:TextGrid from the datatype registry for extension textgrid.
[2024-04-17 17:40:25,533: DEBUG/main] Retrieved datatype module galaxy.datatypes.speech:BPF from the datatype registry for extension par.
[2024-04-17 17:40:25,533: DEBUG/main] Retrieved datatype module galaxy.datatypes.speech:BPF from the datatype registry for extension par.
[2024-04-17 17:40:25,533: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension ffindex.
[2024-04-17 17:40:25,533: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension ffindex.
[2024-04-17 17:40:25,534: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Data from the datatype registry for extension ffdata.
[2024-04-17 17:40:25,534: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Data from the datatype registry for extension ffdata.
[2024-04-17 17:40:25,534: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Pretext from the datatype registry for extension pretext.
[2024-04-17 17:40:25,534: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Pretext from the datatype registry for extension pretext.
[2024-04-17 17:40:25,534: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Html from the datatype registry for extension immuneml_receptors.html.
[2024-04-17 17:40:25,535: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Html from the datatype registry for extension immuneml_receptors.html.
[2024-04-17 17:40:25,535: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:HexrdMaterials from the datatype registry for extension hexrd.materials.h5.
[2024-04-17 17:40:25,535: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:HexrdMaterials from the datatype registry for extension hexrd.materials.h5.
[2024-04-17 17:40:25,535: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Npz from the datatype registry for extension npz.
[2024-04-17 17:40:25,535: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Npz from the datatype registry for extension npz.
[2024-04-17 17:40:25,535: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:HexrdImagesNpz from the datatype registry for extension hexrd.images.npz.
[2024-04-17 17:40:25,536: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:HexrdImagesNpz from the datatype registry for extension hexrd.images.npz.
[2024-04-17 17:40:25,536: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:HexrdEtaOmeNpz from the datatype registry for extension hexrd.eta_ome.npz.
[2024-04-17 17:40:25,536: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:HexrdEtaOmeNpz from the datatype registry for extension hexrd.eta_ome.npz.
[2024-04-17 17:40:25,536: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Npz from the datatype registry for extension hexrd.scored_orientations.npz.
[2024-04-17 17:40:25,536: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Npz from the datatype registry for extension hexrd.scored_orientations.npz.
[2024-04-17 17:40:25,536: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension hexrd.accepted_orientations.
[2024-04-17 17:40:25,537: DEBUG/main] Retrieved datatype module galaxy.datatypes.tabular:Tabular from the datatype registry for extension hexrd.accepted_orientations.
[2024-04-17 17:40:25,537: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Yaml from the datatype registry for extension hexrd.yml.
[2024-04-17 17:40:25,537: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Yaml from the datatype registry for extension hexrd.yml.
[2024-04-17 17:40:25,537: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperTess from the datatype registry for extension neper.tess.
[2024-04-17 17:40:25,537: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperTess from the datatype registry for extension neper.tess.
[2024-04-17 17:40:25,537: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperTesr from the datatype registry for extension neper.tesr.
[2024-04-17 17:40:25,538: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperTesr from the datatype registry for extension neper.tesr.
[2024-04-17 17:40:25,538: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperPoints from the datatype registry for extension neper.points.
[2024-04-17 17:40:25,538: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperPoints from the datatype registry for extension neper.points.
[2024-04-17 17:40:25,538: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperPointsTabular from the datatype registry for extension neper.points.tsv.
[2024-04-17 17:40:25,538: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperPointsTabular from the datatype registry for extension neper.points.tsv.
[2024-04-17 17:40:25,538: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperMultiScaleCell from the datatype registry for extension neper.mscell.
[2024-04-17 17:40:25,539: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:NeperMultiScaleCell from the datatype registry for extension neper.mscell.
[2024-04-17 17:40:25,539: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:GmshMsh from the datatype registry for extension gmsh.msh.
[2024-04-17 17:40:25,539: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:GmshMsh from the datatype registry for extension gmsh.msh.
[2024-04-17 17:40:25,539: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:GmshGeo from the datatype registry for extension gmsh.geo.
[2024-04-17 17:40:25,539: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:GmshGeo from the datatype registry for extension gmsh.geo.
[2024-04-17 17:40:25,539: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:ZsetGeof from the datatype registry for extension zset.geof.
[2024-04-17 17:40:25,539: DEBUG/main] Retrieved datatype module galaxy.datatypes.constructive_solid_geometry:ZsetGeof from the datatype registry for extension zset.geof.
[2024-04-17 17:40:25,540: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Text from the datatype registry for extension pov.
[2024-04-17 17:40:25,540: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Text from the datatype registry for extension pov.
[2024-04-17 17:40:25,540: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:PithyaResult from the datatype registry for extension pithya.result.
[2024-04-17 17:40:25,540: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:PithyaResult from the datatype registry for extension pithya.result.
[2024-04-17 17:40:25,540: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:PithyaProperty from the datatype registry for extension pithya.property.
[2024-04-17 17:40:25,540: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:PithyaProperty from the datatype registry for extension pithya.property.
[2024-04-17 17:40:25,540: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:PithyaModel from the datatype registry for extension pithya.model.
[2024-04-17 17:40:25,541: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:PithyaModel from the datatype registry for extension pithya.model.
[2024-04-17 17:40:25,541: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:BCSLts from the datatype registry for extension bcsl.ts.
[2024-04-17 17:40:25,541: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:BCSLts from the datatype registry for extension bcsl.ts.
[2024-04-17 17:40:25,541: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:BCSLmodel from the datatype registry for extension bcsl.model.
[2024-04-17 17:40:25,541: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:BCSLmodel from the datatype registry for extension bcsl.model.
[2024-04-17 17:40:25,541: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:StormSample from the datatype registry for extension storm.sample.
[2024-04-17 17:40:25,541: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:StormSample from the datatype registry for extension storm.sample.
[2024-04-17 17:40:25,542: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:StormCheck from the datatype registry for extension storm.check.
[2024-04-17 17:40:25,542: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:StormCheck from the datatype registry for extension storm.check.
[2024-04-17 17:40:25,542: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:CTLresult from the datatype registry for extension ctl.result.
[2024-04-17 17:40:25,542: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:CTLresult from the datatype registry for extension ctl.result.
[2024-04-17 17:40:25,542: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Castep from the datatype registry for extension castep.
[2024-04-17 17:40:25,542: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Castep from the datatype registry for extension castep.
[2024-04-17 17:40:25,542: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Param from the datatype registry for extension param.
[2024-04-17 17:40:25,543: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:Param from the datatype registry for extension param.
[2024-04-17 17:40:25,543: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:FormattedDensity from the datatype registry for extension den_fmt.
[2024-04-17 17:40:25,543: DEBUG/main] Retrieved datatype module galaxy.datatypes.text:FormattedDensity from the datatype registry for extension den_fmt.
[2024-04-17 17:40:25,543: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension bil.
[2024-04-17 17:40:25,543: DEBUG/main] Retrieved datatype module galaxy.datatypes.binary:Binary from the datatype registry for extension bil.
[2024-04-17 17:40:25,543: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension hdr.
[2024-04-17 17:40:25,543: DEBUG/main] Retrieved datatype module galaxy.datatypes.data:Text from the datatype registry for extension hdr.
[2024-04-17 17:40:25,544: DEBUG/main] Retrieved datatype module galaxy.datatypes.gis:Shapefile from the datatype registry for extension shp.
[2024-04-17 17:40:25,544: DEBUG/main] Retrieved datatype module galaxy.datatypes.gis:Shapefile from the datatype registry for extension shp.
[2024-04-17 17:40:25,545: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.plant_tribes:PlantTribesKsComponents'
[2024-04-17 17:40:25,545: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.plant_tribes:PlantTribesKsComponents'
[2024-04-17 17:40:25,545: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.plant_tribes:Smat'
[2024-04-17 17:40:25,545: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.plant_tribes:Smat'
[2024-04-17 17:40:25,545: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Sabund'
[2024-04-17 17:40:25,546: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Sabund'
[2024-04-17 17:40:25,546: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Otu'
[2024-04-17 17:40:25,546: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Otu'
[2024-04-17 17:40:25,546: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:GroupAbund'
[2024-04-17 17:40:25,546: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:GroupAbund'
[2024-04-17 17:40:25,546: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:SecondaryStructureMap'
[2024-04-17 17:40:25,546: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:SecondaryStructureMap'
[2024-04-17 17:40:25,546: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:LowerTriangleDistanceMatrix'
[2024-04-17 17:40:25,546: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:LowerTriangleDistanceMatrix'
[2024-04-17 17:40:25,546: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:SquareDistanceMatrix'
[2024-04-17 17:40:25,546: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:SquareDistanceMatrix'
[2024-04-17 17:40:25,546: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:PairwiseDistanceMatrix'
[2024-04-17 17:40:25,547: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:PairwiseDistanceMatrix'
[2024-04-17 17:40:25,547: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Oligos'
[2024-04-17 17:40:25,547: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Oligos'
[2024-04-17 17:40:25,547: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Quantile'
[2024-04-17 17:40:25,547: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Quantile'
[2024-04-17 17:40:25,547: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Frequency'
[2024-04-17 17:40:25,547: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Frequency'
[2024-04-17 17:40:25,547: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:LaneMask'
[2024-04-17 17:40:25,547: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:LaneMask'
[2024-04-17 17:40:25,547: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:RefTaxonomy'
[2024-04-17 17:40:25,547: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:RefTaxonomy'
[2024-04-17 17:40:25,547: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Axes'
[2024-04-17 17:40:25,547: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.mothur:Axes'
[2024-04-17 17:40:25,548: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:PlyAscii'
[2024-04-17 17:40:25,548: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:PlyAscii'
[2024-04-17 17:40:25,548: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:PlyBinary'
[2024-04-17 17:40:25,548: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:PlyBinary'
[2024-04-17 17:40:25,548: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:VtkAscii'
[2024-04-17 17:40:25,548: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:VtkAscii'
[2024-04-17 17:40:25,548: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:VtkBinary'
[2024-04-17 17:40:25,548: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:VtkBinary'
[2024-04-17 17:40:25,548: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:NeperTess'
[2024-04-17 17:40:25,548: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:NeperTess'
[2024-04-17 17:40:25,548: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:NeperTesr'
[2024-04-17 17:40:25,548: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:NeperTesr'
[2024-04-17 17:40:25,549: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:GmshMsh'
[2024-04-17 17:40:25,549: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.constructive_solid_geometry:GmshMsh'
[2024-04-17 17:40:25,549: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.goldenpath:GoldenPath'
[2024-04-17 17:40:25,549: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.goldenpath:GoldenPath'
[2024-04-17 17:40:25,549: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:ScIdx'
[2024-04-17 17:40:25,549: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:ScIdx'
[2024-04-17 17:40:25,549: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:Vcf'
[2024-04-17 17:40:25,549: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:Vcf'
[2024-04-17 17:40:25,549: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:JP2'
[2024-04-17 17:40:25,549: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:JP2'
[2024-04-17 17:40:25,549: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:TwoBit'
[2024-04-17 17:40:25,550: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:TwoBit'
[2024-04-17 17:40:25,550: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:GeminiSQLite'
[2024-04-17 17:40:25,550: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:GeminiSQLite'
[2024-04-17 17:40:25,550: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:SQmass'
[2024-04-17 17:40:25,550: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:SQmass'
[2024-04-17 17:40:25,550: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:MzSQlite'
[2024-04-17 17:40:25,550: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:MzSQlite'
[2024-04-17 17:40:25,550: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:OSW'
[2024-04-17 17:40:25,550: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:OSW'
[2024-04-17 17:40:25,550: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:PQP'
[2024-04-17 17:40:25,550: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:PQP'
[2024-04-17 17:40:25,550: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:IdpDB'
[2024-04-17 17:40:25,551: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:IdpDB'
[2024-04-17 17:40:25,551: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:ElibSQlite'
[2024-04-17 17:40:25,551: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:ElibSQlite'
[2024-04-17 17:40:25,551: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:DlibSQlite'
[2024-04-17 17:40:25,551: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:DlibSQlite'
[2024-04-17 17:40:25,551: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:BlibSQlite'
[2024-04-17 17:40:25,551: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:BlibSQlite'
[2024-04-17 17:40:25,551: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:ChiraSQLite'
[2024-04-17 17:40:25,551: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:ChiraSQLite'
[2024-04-17 17:40:25,551: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:CuffDiffSQlite'
[2024-04-17 17:40:25,551: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:CuffDiffSQlite'
[2024-04-17 17:40:25,551: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:GAFASQLite'
[2024-04-17 17:40:25,552: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:GAFASQLite'
[2024-04-17 17:40:25,552: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:NcbiTaxonomySQlite'
[2024-04-17 17:40:25,552: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:NcbiTaxonomySQlite'
[2024-04-17 17:40:25,552: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:SQlite'
[2024-04-17 17:40:25,552: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:SQlite'
[2024-04-17 17:40:25,552: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:H5MLM'
[2024-04-17 17:40:25,552: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:H5MLM'
[2024-04-17 17:40:25,552: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Cool'
[2024-04-17 17:40:25,552: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Cool'
[2024-04-17 17:40:25,552: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:MCool'
[2024-04-17 17:40:25,553: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:MCool'
[2024-04-17 17:40:25,553: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Loom'
[2024-04-17 17:40:25,553: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Loom'
[2024-04-17 17:40:25,553: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Anndata'
[2024-04-17 17:40:25,553: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Anndata'
[2024-04-17 17:40:25,553: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Biom2'
[2024-04-17 17:40:25,553: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Biom2'
[2024-04-17 17:40:25,553: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:HexrdMaterials'
[2024-04-17 17:40:25,553: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:HexrdMaterials'
[2024-04-17 17:40:25,553: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:H5'
[2024-04-17 17:40:25,553: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:H5'
[2024-04-17 17:40:25,554: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Grib'
[2024-04-17 17:40:25,554: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Grib'
[2024-04-17 17:40:25,554: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:HexrdImagesNpz'
[2024-04-17 17:40:25,554: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:HexrdImagesNpz'
[2024-04-17 17:40:25,554: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:HexrdEtaOmeNpz'
[2024-04-17 17:40:25,554: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:HexrdEtaOmeNpz'
[2024-04-17 17:40:25,554: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Npz'
[2024-04-17 17:40:25,554: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Npz'
[2024-04-17 17:40:25,554: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Bam'
[2024-04-17 17:40:25,554: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Bam'
[2024-04-17 17:40:25,554: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:BamQuerynameSorted'
[2024-04-17 17:40:25,555: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:BamQuerynameSorted'
[2024-04-17 17:40:25,555: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:BamNative'
[2024-04-17 17:40:25,555: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:BamNative'
[2024-04-17 17:40:25,555: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:CRAM'
[2024-04-17 17:40:25,555: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:CRAM'
[2024-04-17 17:40:25,555: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Sff'
[2024-04-17 17:40:25,555: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Sff'
[2024-04-17 17:40:25,555: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Sra'
[2024-04-17 17:40:25,555: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Sra'
[2024-04-17 17:40:25,555: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:NetCDF'
[2024-04-17 17:40:25,555: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:NetCDF'
[2024-04-17 17:40:25,556: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:DAA'
[2024-04-17 17:40:25,556: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:DAA'
[2024-04-17 17:40:25,556: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:RMA6'
[2024-04-17 17:40:25,556: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:RMA6'
[2024-04-17 17:40:25,556: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:DMND'
[2024-04-17 17:40:25,556: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:DMND'
[2024-04-17 17:40:25,556: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Parquet'
[2024-04-17 17:40:25,556: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Parquet'
[2024-04-17 17:40:25,556: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:BafTar'
[2024-04-17 17:40:25,556: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:BafTar'
[2024-04-17 17:40:25,556: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:TdfTar'
[2024-04-17 17:40:25,557: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:TdfTar'
[2024-04-17 17:40:25,557: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:MassHunterTar'
[2024-04-17 17:40:25,557: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:MassHunterTar'
[2024-04-17 17:40:25,557: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:MassLynxTar'
[2024-04-17 17:40:25,557: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:MassLynxTar'
[2024-04-17 17:40:25,557: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:YepTar'
[2024-04-17 17:40:25,557: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:YepTar'
[2024-04-17 17:40:25,557: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:WiffTar'
[2024-04-17 17:40:25,557: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:WiffTar'
[2024-04-17 17:40:25,557: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Fast5ArchiveGz'
[2024-04-17 17:40:25,558: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Fast5ArchiveGz'
[2024-04-17 17:40:25,558: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Fast5ArchiveBz2'
[2024-04-17 17:40:25,558: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Fast5ArchiveBz2'
[2024-04-17 17:40:25,558: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Fast5Archive'
[2024-04-17 17:40:25,558: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Fast5Archive'
[2024-04-17 17:40:25,558: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Meryldb'
[2024-04-17 17:40:25,558: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Meryldb'
[2024-04-17 17:40:25,558: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Bref3'
[2024-04-17 17:40:25,558: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Bref3'
[2024-04-17 17:40:25,558: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:PostgresqlArchive'
[2024-04-17 17:40:25,558: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:PostgresqlArchive'
[2024-04-17 17:40:25,559: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:ICM'
[2024-04-17 17:40:25,559: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:ICM'
[2024-04-17 17:40:25,559: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Idat'
[2024-04-17 17:40:25,559: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Idat'
[2024-04-17 17:40:25,559: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Trr'
[2024-04-17 17:40:25,559: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Trr'
[2024-04-17 17:40:25,559: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Dcd'
[2024-04-17 17:40:25,559: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Dcd'
[2024-04-17 17:40:25,559: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Xtc'
[2024-04-17 17:40:25,559: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Xtc'
[2024-04-17 17:40:25,560: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Cpt'
[2024-04-17 17:40:25,560: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Cpt'
[2024-04-17 17:40:25,560: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Edr'
[2024-04-17 17:40:25,560: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Edr'
[2024-04-17 17:40:25,560: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Vel'
[2024-04-17 17:40:25,560: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Vel'
[2024-04-17 17:40:25,560: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Xlsx'
[2024-04-17 17:40:25,560: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Xlsx'
[2024-04-17 17:40:25,560: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.qiime2:QIIME2Metadata'
[2024-04-17 17:40:25,560: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.qiime2:QIIME2Metadata'
[2024-04-17 17:40:25,560: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.qiime2:QIIME2Artifact'
[2024-04-17 17:40:25,561: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.qiime2:QIIME2Artifact'
[2024-04-17 17:40:25,561: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.qiime2:QIIME2Visualization'
[2024-04-17 17:40:25,561: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.qiime2:QIIME2Visualization'
[2024-04-17 17:40:25,561: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:CompressedZipArchive'
[2024-04-17 17:40:25,561: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:CompressedZipArchive'
[2024-04-17 17:40:25,561: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Pretext'
[2024-04-17 17:40:25,561: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:Pretext'
[2024-04-17 17:40:25,561: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.annotation:Augustus'
[2024-04-17 17:40:25,561: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.annotation:Augustus'
[2024-04-17 17:40:25,561: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.xml:Owl'
[2024-04-17 17:40:25,562: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.xml:Owl'
[2024-04-17 17:40:25,562: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.triples:Rdf'
[2024-04-17 17:40:25,562: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.triples:Rdf'
[2024-04-17 17:40:25,562: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.blast:BlastXml'
[2024-04-17 17:40:25,562: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.blast:BlastXml'
[2024-04-17 17:40:25,562: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Gifti'
[2024-04-17 17:40:25,562: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Gifti'
[2024-04-17 17:40:25,562: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.xml:Phyloxml'
[2024-04-17 17:40:25,562: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.xml:Phyloxml'
[2024-04-17 17:40:25,562: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.xml:Dzi'
[2024-04-17 17:40:25,563: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.xml:Dzi'
[2024-04-17 17:40:25,563: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.xml:Sbml'
[2024-04-17 17:40:25,563: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.xml:Sbml'
[2024-04-17 17:40:25,563: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Dta2d'
[2024-04-17 17:40:25,563: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Dta2d'
[2024-04-17 17:40:25,563: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Edta'
[2024-04-17 17:40:25,563: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Edta'
[2024-04-17 17:40:25,563: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:ConsensusXML'
[2024-04-17 17:40:25,563: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:ConsensusXML'
[2024-04-17 17:40:25,563: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:IdXML'
[2024-04-17 17:40:25,564: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:IdXML'
[2024-04-17 17:40:25,564: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:FeatureXML'
[2024-04-17 17:40:25,564: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:FeatureXML'
[2024-04-17 17:40:25,564: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MascotXML'
[2024-04-17 17:40:25,564: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MascotXML'
[2024-04-17 17:40:25,564: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Mgf'
[2024-04-17 17:40:25,564: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Mgf'
[2024-04-17 17:40:25,564: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Ms2'
[2024-04-17 17:40:25,564: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Ms2'
[2024-04-17 17:40:25,564: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Msp'
[2024-04-17 17:40:25,565: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Msp'
[2024-04-17 17:40:25,565: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzData'
[2024-04-17 17:40:25,565: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzData'
[2024-04-17 17:40:25,565: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzIdentML'
[2024-04-17 17:40:25,565: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzIdentML'
[2024-04-17 17:40:25,565: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzML'
[2024-04-17 17:40:25,565: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzML'
[2024-04-17 17:40:25,565: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzQuantML'
[2024-04-17 17:40:25,565: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzQuantML'
[2024-04-17 17:40:25,565: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzTab'
[2024-04-17 17:40:25,566: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzTab'
[2024-04-17 17:40:25,566: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzTab2'
[2024-04-17 17:40:25,566: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzTab2'
[2024-04-17 17:40:25,566: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:ParamXml'
[2024-04-17 17:40:25,566: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:ParamXml'
[2024-04-17 17:40:25,566: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzXML'
[2024-04-17 17:40:25,566: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:MzXML'
[2024-04-17 17:40:25,566: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:NmrML'
[2024-04-17 17:40:25,566: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:NmrML'
[2024-04-17 17:40:25,567: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Kroenik'
[2024-04-17 17:40:25,567: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Kroenik'
[2024-04-17 17:40:25,567: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:PepList'
[2024-04-17 17:40:25,567: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:PepList'
[2024-04-17 17:40:25,567: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:PSMS'
[2024-04-17 17:40:25,567: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:PSMS'
[2024-04-17 17:40:25,567: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:PepXml'
[2024-04-17 17:40:25,567: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:PepXml'
[2024-04-17 17:40:25,567: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:ProtXML'
[2024-04-17 17:40:25,567: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:ProtXML'
[2024-04-17 17:40:25,568: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:SPLib'
[2024-04-17 17:40:25,568: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:SPLib'
[2024-04-17 17:40:25,568: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:TandemXML'
[2024-04-17 17:40:25,568: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:TandemXML'
[2024-04-17 17:40:25,568: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:ThermoRAW'
[2024-04-17 17:40:25,568: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:ThermoRAW'
[2024-04-17 17:40:25,568: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:TraML'
[2024-04-17 17:40:25,568: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:TraML'
[2024-04-17 17:40:25,568: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:TrafoXML'
[2024-04-17 17:40:25,569: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:TrafoXML'
[2024-04-17 17:40:25,569: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:UniProtXML'
[2024-04-17 17:40:25,569: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:UniProtXML'
[2024-04-17 17:40:25,569: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:XquestXML'
[2024-04-17 17:40:25,569: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:XquestXML'
[2024-04-17 17:40:25,569: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:XquestSpecXML'
[2024-04-17 17:40:25,569: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:XquestSpecXML'
[2024-04-17 17:40:25,569: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:QCML'
[2024-04-17 17:40:25,569: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:QCML'
[2024-04-17 17:40:25,570: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Wiff'
[2024-04-17 17:40:25,570: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:Wiff'
[2024-04-17 17:40:25,570: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:PEFF'
[2024-04-17 17:40:25,570: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.proteomics:PEFF'
[2024-04-17 17:40:25,570: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:CML'
[2024-04-17 17:40:25,570: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:CML'
[2024-04-17 17:40:25,570: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.xml:GenericXml'
[2024-04-17 17:40:25,570: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.xml:GenericXml'
[2024-04-17 17:40:25,570: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.triples:HDT'
[2024-04-17 17:40:25,571: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.triples:HDT'
[2024-04-17 17:40:25,571: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.triples:Turtle'
[2024-04-17 17:40:25,571: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.triples:Turtle'
[2024-04-17 17:40:25,571: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.triples:NTriples'
[2024-04-17 17:40:25,571: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.triples:NTriples'
[2024-04-17 17:40:25,571: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.triples:Jsonld'
[2024-04-17 17:40:25,571: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.triples:Jsonld'
[2024-04-17 17:40:25,571: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Maf'
[2024-04-17 17:40:25,571: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Maf'
[2024-04-17 17:40:25,571: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Lav'
[2024-04-17 17:40:25,572: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Lav'
[2024-04-17 17:40:25,572: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:MemePsp'
[2024-04-17 17:40:25,572: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:MemePsp'
[2024-04-17 17:40:25,572: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Fastg'
[2024-04-17 17:40:25,572: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Fastg'
[2024-04-17 17:40:25,572: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:csFasta'
[2024-04-17 17:40:25,572: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:csFasta'
[2024-04-17 17:40:25,572: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.qualityscore:QualityScoreSOLiD'
[2024-04-17 17:40:25,572: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.qualityscore:QualityScoreSOLiD'
[2024-04-17 17:40:25,573: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.qualityscore:QualityScore454'
[2024-04-17 17:40:25,573: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.qualityscore:QualityScore454'
[2024-04-17 17:40:25,573: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:SDF'
[2024-04-17 17:40:25,573: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:SDF'
[2024-04-17 17:40:25,573: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:PDB'
[2024-04-17 17:40:25,573: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:PDB'
[2024-04-17 17:40:25,573: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:Cell'
[2024-04-17 17:40:25,573: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:Cell'
[2024-04-17 17:40:25,573: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:CIF'
[2024-04-17 17:40:25,574: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:CIF'
[2024-04-17 17:40:25,574: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:ExtendedXYZ'
[2024-04-17 17:40:25,574: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:ExtendedXYZ'
[2024-04-17 17:40:25,574: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:XYZ'
[2024-04-17 17:40:25,574: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:XYZ'
[2024-04-17 17:40:25,574: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:MOL2'
[2024-04-17 17:40:25,574: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:MOL2'
[2024-04-17 17:40:25,574: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:InChI'
[2024-04-17 17:40:25,574: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:InChI'
[2024-04-17 17:40:25,575: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:FPS'
[2024-04-17 17:40:25,575: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:FPS'
[2024-04-17 17:40:25,575: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:PQR'
[2024-04-17 17:40:25,575: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:PQR'
[2024-04-17 17:40:25,575: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:GRO'
[2024-04-17 17:40:25,575: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.molecules:GRO'
[2024-04-17 17:40:25,575: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.phylip:Phylip'
[2024-04-17 17:40:25,575: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.phylip:Phylip'
[2024-04-17 17:40:25,575: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Fasta'
[2024-04-17 17:40:25,576: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Fasta'
[2024-04-17 17:40:25,576: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:FastqCSSanger'
[2024-04-17 17:40:25,576: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:FastqCSSanger'
[2024-04-17 17:40:25,576: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:FastqSanger'
[2024-04-17 17:40:25,576: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:FastqSanger'
[2024-04-17 17:40:25,576: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Fastq'
[2024-04-17 17:40:25,576: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Fastq'
[2024-04-17 17:40:25,576: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:Wiggle'
[2024-04-17 17:40:25,576: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:Wiggle'
[2024-04-17 17:40:25,577: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Html'
[2024-04-17 17:40:25,577: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Html'
[2024-04-17 17:40:25,577: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Pdf'
[2024-04-17 17:40:25,577: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Pdf'
[2024-04-17 17:40:25,577: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Axt'
[2024-04-17 17:40:25,577: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Axt'
[2024-04-17 17:40:25,577: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Genbank'
[2024-04-17 17:40:25,577: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:Genbank'
[2024-04-17 17:40:25,578: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:Bed'
[2024-04-17 17:40:25,578: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:Bed'
[2024-04-17 17:40:25,578: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:CustomTrack'
[2024-04-17 17:40:25,578: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:CustomTrack'
[2024-04-17 17:40:25,578: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:Gtf'
[2024-04-17 17:40:25,578: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:Gtf'
[2024-04-17 17:40:25,578: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:Gff'
[2024-04-17 17:40:25,578: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:Gff'
[2024-04-17 17:40:25,578: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:Gff3'
[2024-04-17 17:40:25,579: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:Gff3'
[2024-04-17 17:40:25,579: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:Pileup'
[2024-04-17 17:40:25,579: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:Pileup'
[2024-04-17 17:40:25,579: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:Psl'
[2024-04-17 17:40:25,579: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:Psl'
[2024-04-17 17:40:25,579: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Paf'
[2024-04-17 17:40:25,579: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Paf'
[2024-04-17 17:40:25,579: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:Interval'
[2024-04-17 17:40:25,580: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.interval:Interval'
[2024-04-17 17:40:25,580: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:Sam'
[2024-04-17 17:40:25,580: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:Sam'
[2024-04-17 17:40:25,580: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.data:Newick'
[2024-04-17 17:40:25,580: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.data:Newick'
[2024-04-17 17:40:25,580: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.data:Nexus'
[2024-04-17 17:40:25,580: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.data:Nexus'
[2024-04-17 17:40:25,580: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:IQTree'
[2024-04-17 17:40:25,581: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:IQTree'
[2024-04-17 17:40:25,581: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Obo'
[2024-04-17 17:40:25,581: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Obo'
[2024-04-17 17:40:25,581: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Arff'
[2024-04-17 17:40:25,581: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Arff'
[2024-04-17 17:40:25,581: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Ipynb'
[2024-04-17 17:40:25,581: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Ipynb'
[2024-04-17 17:40:25,581: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Biom1'
[2024-04-17 17:40:25,582: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Biom1'
[2024-04-17 17:40:25,582: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:ImgtJson'
[2024-04-17 17:40:25,582: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:ImgtJson'
[2024-04-17 17:40:25,582: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:GeoJson'
[2024-04-17 17:40:25,582: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:GeoJson'
[2024-04-17 17:40:25,582: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:PithyaResult'
[2024-04-17 17:40:25,582: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:PithyaResult'
[2024-04-17 17:40:25,582: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:BCSLts'
[2024-04-17 17:40:25,582: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:BCSLts'
[2024-04-17 17:40:25,583: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Json'
[2024-04-17 17:40:25,583: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Json'
[2024-04-17 17:40:25,583: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.genetics:GenotypeMatrix'
[2024-04-17 17:40:25,583: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.genetics:GenotypeMatrix'
[2024-04-17 17:40:25,583: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.genetics:DataIn'
[2024-04-17 17:40:25,583: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.genetics:DataIn'
[2024-04-17 17:40:25,583: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.genetics:MarkerMap'
[2024-04-17 17:40:25,583: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.genetics:MarkerMap'
[2024-04-17 17:40:25,584: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.genetics:AllegroLOD'
[2024-04-17 17:40:25,584: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.genetics:AllegroLOD'
[2024-04-17 17:40:25,584: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:RNADotPlotMatrix'
[2024-04-17 17:40:25,584: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:RNADotPlotMatrix'
[2024-04-17 17:40:25,584: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:DotBracket'
[2024-04-17 17:40:25,584: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.sequence:DotBracket'
[2024-04-17 17:40:25,584: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:CMAP'
[2024-04-17 17:40:25,584: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:CMAP'
[2024-04-17 17:40:25,584: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:ConnectivityTable'
[2024-04-17 17:40:25,585: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:ConnectivityTable'
[2024-04-17 17:40:25,585: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:CSV'
[2024-04-17 17:40:25,585: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:CSV'
[2024-04-17 17:40:25,585: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.metacyto:mSummary'
[2024-04-17 17:40:25,585: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.metacyto:mSummary'
[2024-04-17 17:40:25,585: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.metacyto:mStats'
[2024-04-17 17:40:25,585: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.metacyto:mStats'
[2024-04-17 17:40:25,585: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:TSV'
[2024-04-17 17:40:25,586: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:TSV'
[2024-04-17 17:40:25,586: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:MatrixMarket'
[2024-04-17 17:40:25,586: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.tabular:MatrixMarket'
[2024-04-17 17:40:25,586: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.msa:Hmmer2'
[2024-04-17 17:40:25,586: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.msa:Hmmer2'
[2024-04-17 17:40:25,586: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.msa:Hmmer3'
[2024-04-17 17:40:25,586: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.msa:Hmmer3'
[2024-04-17 17:40:25,586: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.msa:Stockholm_1_0'
[2024-04-17 17:40:25,587: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.msa:Stockholm_1_0'
[2024-04-17 17:40:25,587: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.msa:MauveXmfa'
[2024-04-17 17:40:25,587: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.msa:MauveXmfa'
[2024-04-17 17:40:25,587: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.msa:InfernalCM'
[2024-04-17 17:40:25,587: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.msa:InfernalCM'
[2024-04-17 17:40:25,587: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.annotation:SnapHmm'
[2024-04-17 17:40:25,587: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.annotation:SnapHmm'
[2024-04-17 17:40:25,587: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.microarrays:Cel'
[2024-04-17 17:40:25,588: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.microarrays:Cel'
[2024-04-17 17:40:25,588: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.microarrays:Gpr'
[2024-04-17 17:40:25,588: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.microarrays:Gpr'
[2024-04-17 17:40:25,588: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.microarrays:Gal'
[2024-04-17 17:40:25,588: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.microarrays:Gal'
[2024-04-17 17:40:25,588: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:RData'
[2024-04-17 17:40:25,588: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:RData'
[2024-04-17 17:40:25,588: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:RDS'
[2024-04-17 17:40:25,589: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:RDS'
[2024-04-17 17:40:25,589: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Mrc2014'
[2024-04-17 17:40:25,589: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Mrc2014'
[2024-04-17 17:40:25,589: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Jpg'
[2024-04-17 17:40:25,589: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Jpg'
[2024-04-17 17:40:25,589: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Png'
[2024-04-17 17:40:25,589: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Png'
[2024-04-17 17:40:25,589: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:OMETiff'
[2024-04-17 17:40:25,590: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:OMETiff'
[2024-04-17 17:40:25,590: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Tiff'
[2024-04-17 17:40:25,590: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Tiff'
[2024-04-17 17:40:25,590: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Bmp'
[2024-04-17 17:40:25,590: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Bmp'
[2024-04-17 17:40:25,590: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Gif'
[2024-04-17 17:40:25,590: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Gif'
[2024-04-17 17:40:25,590: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Im'
[2024-04-17 17:40:25,591: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Im'
[2024-04-17 17:40:25,591: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Pcd'
[2024-04-17 17:40:25,591: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Pcd'
[2024-04-17 17:40:25,591: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Pcx'
[2024-04-17 17:40:25,591: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Pcx'
[2024-04-17 17:40:25,591: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Ppm'
[2024-04-17 17:40:25,591: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Ppm'
[2024-04-17 17:40:25,591: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Psd'
[2024-04-17 17:40:25,592: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Psd'
[2024-04-17 17:40:25,592: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Xbm'
[2024-04-17 17:40:25,592: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Xbm'
[2024-04-17 17:40:25,592: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Rgb'
[2024-04-17 17:40:25,592: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Rgb'
[2024-04-17 17:40:25,592: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Pbm'
[2024-04-17 17:40:25,592: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Pbm'
[2024-04-17 17:40:25,592: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Pgm'
[2024-04-17 17:40:25,593: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Pgm'
[2024-04-17 17:40:25,593: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Xpm'
[2024-04-17 17:40:25,593: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Xpm'
[2024-04-17 17:40:25,593: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Eps'
[2024-04-17 17:40:25,593: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Eps'
[2024-04-17 17:40:25,593: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Rast'
[2024-04-17 17:40:25,593: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Rast'
[2024-04-17 17:40:25,593: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Tck'
[2024-04-17 17:40:25,594: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Tck'
[2024-04-17 17:40:25,594: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Trk'
[2024-04-17 17:40:25,594: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Trk'
[2024-04-17 17:40:25,594: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Nifti1'
[2024-04-17 17:40:25,594: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Nifti1'
[2024-04-17 17:40:25,594: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Nifti2'
[2024-04-17 17:40:25,594: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Nifti2'
[2024-04-17 17:40:25,594: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Star'
[2024-04-17 17:40:25,595: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.images:Star'
[2024-04-17 17:40:25,595: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.media:Wav'
[2024-04-17 17:40:25,595: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.media:Wav'
[2024-04-17 17:40:25,595: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.media:Mkv'
[2024-04-17 17:40:25,595: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.media:Mkv'
[2024-04-17 17:40:25,595: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.media:Mp3'
[2024-04-17 17:40:25,595: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.media:Mp3'
[2024-04-17 17:40:25,596: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.media:Mp4'
[2024-04-17 17:40:25,596: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.media:Mp4'
[2024-04-17 17:40:25,596: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.media:Flv'
[2024-04-17 17:40:25,596: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.media:Flv'
[2024-04-17 17:40:25,596: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.media:Mpg'
[2024-04-17 17:40:25,596: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.media:Mpg'
[2024-04-17 17:40:25,596: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.speech:TextGrid'
[2024-04-17 17:40:25,597: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.speech:TextGrid'
[2024-04-17 17:40:25,597: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.speech:BPF'
[2024-04-17 17:40:25,598: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.speech:BPF'
[2024-04-17 17:40:25,598: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Castep'
[2024-04-17 17:40:25,598: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Castep'
[2024-04-17 17:40:25,598: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:CTLresult'
[2024-04-17 17:40:25,598: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:CTLresult'
[2024-04-17 17:40:25,598: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:FormattedDensity'
[2024-04-17 17:40:25,598: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:FormattedDensity'
[2024-04-17 17:40:25,598: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Param'
[2024-04-17 17:40:25,599: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Param'
[2024-04-17 17:40:25,599: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Yaml'
[2024-04-17 17:40:25,599: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:Yaml'
[2024-04-17 17:40:25,599: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliCountGraph'
[2024-04-17 17:40:25,599: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliCountGraph'
[2024-04-17 17:40:25,599: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliNodeGraph'
[2024-04-17 17:40:25,599: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliNodeGraph'
[2024-04-17 17:40:25,600: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliTagSet'
[2024-04-17 17:40:25,600: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliTagSet'
[2024-04-17 17:40:25,600: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliStopTags'
[2024-04-17 17:40:25,600: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliStopTags'
[2024-04-17 17:40:25,600: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliSubset'
[2024-04-17 17:40:25,600: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliSubset'
[2024-04-17 17:40:25,600: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliGraphLabels'
[2024-04-17 17:40:25,600: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.binary:OxliGraphLabels'
[2024-04-17 17:40:25,601: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.neo4j:Neo4jDBzip'
[2024-04-17 17:40:25,601: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.neo4j:Neo4jDBzip'
[2024-04-17 17:40:25,601: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:PithyaProperty'
[2024-04-17 17:40:25,601: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:PithyaProperty'
[2024-04-17 17:40:25,601: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:PithyaModel'
[2024-04-17 17:40:25,601: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:PithyaModel'
[2024-04-17 17:40:25,601: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:BCSLmodel'
[2024-04-17 17:40:25,602: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:BCSLmodel'
[2024-04-17 17:40:25,602: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:StormSample'
[2024-04-17 17:40:25,602: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:StormSample'
[2024-04-17 17:40:25,602: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:StormCheck'
[2024-04-17 17:40:25,602: DEBUG/main] Loaded sniffer for datatype 'galaxy.datatypes.text:StormCheck'
[2024-04-17 17:40:25,615: DEBUG/main] Build site file [tool-data/shared/ucsc/ucsc_build_sites.txt] not found using sample [tool-data/shared/ucsc/ucsc_build_sites.txt.sample].
[2024-04-17 17:40:25,615: DEBUG/main] Build site file [tool-data/shared/ucsc/ucsc_build_sites.txt] not found using sample [tool-data/shared/ucsc/ucsc_build_sites.txt.sample].
[2024-04-17 17:40:25,615: DEBUG/main] Loaded build site 'ucsc': tool-data/shared/ucsc/ucsc_build_sites.txt.sample with display sites: ['main', 'test', 'archaea', 'ucla']
[2024-04-17 17:40:25,616: DEBUG/main] Loaded build site 'ucsc': tool-data/shared/ucsc/ucsc_build_sites.txt.sample with display sites: ['main', 'test', 'archaea', 'ucla']
[2024-04-17 17:40:25,616: DEBUG/main] Loaded build site 'gbrowse': tool-data/shared/gbrowse/gbrowse_build_sites.txt with display sites: ['modencode', 'sgd_yeast', 'tair', 'wormbase', 'wormbase_ws120', 'wormbase_ws140', 'wormbase_ws170', 'wormbase_ws180', 'wormbase_ws190', 'wormbase_ws200', 'wormbase_ws204', 'wormbase_ws210', 'wormbase_ws220', 'wormbase_ws225']
[2024-04-17 17:40:25,616: DEBUG/main] Loaded build site 'ensembl': tool-data/shared/ensembl/ensembl_sites.txt
[2024-04-17 17:40:25,616: DEBUG/main] Loaded build site 'ensembl_data_url': tool-data/shared/ensembl/ensembl_sites_data_URL.txt
[2024-04-17 17:40:25,616: DEBUG/main] Build site file [tool-data/shared/igv/igv_build_sites.txt] not found using sample [tool-data/shared/igv/igv_build_sites.txt.sample].
[2024-04-17 17:40:25,616: DEBUG/main] Loaded build site 'igv': tool-data/shared/igv/igv_build_sites.txt.sample
[2024-04-17 17:40:25,616: DEBUG/main] Build site file [tool-data/shared/rviewer/rviewer_build_sites.txt] not found using sample [tool-data/shared/rviewer/rviewer_build_sites.txt.sample].
[2024-04-17 17:40:25,616: DEBUG/main] Loaded build site 'rviewer': tool-data/shared/rviewer/rviewer_build_sites.txt.sample
[2024-04-17 17:40:25,617: DEBUG/main] Loaded build site 'gbrowse': tool-data/shared/gbrowse/gbrowse_build_sites.txt with display sites: ['modencode', 'sgd_yeast', 'tair', 'wormbase', 'wormbase_ws120', 'wormbase_ws140', 'wormbase_ws170', 'wormbase_ws180', 'wormbase_ws190', 'wormbase_ws200', 'wormbase_ws204', 'wormbase_ws210', 'wormbase_ws220', 'wormbase_ws225']
[2024-04-17 17:40:25,617: DEBUG/main] Loaded build site 'ensembl': tool-data/shared/ensembl/ensembl_sites.txt
[2024-04-17 17:40:25,617: DEBUG/main] Loaded build site 'ensembl_data_url': tool-data/shared/ensembl/ensembl_sites_data_URL.txt
[2024-04-17 17:40:25,617: DEBUG/main] Build site file [tool-data/shared/igv/igv_build_sites.txt] not found using sample [tool-data/shared/igv/igv_build_sites.txt.sample].
[2024-04-17 17:40:25,617: DEBUG/main] Loaded build site 'igv': tool-data/shared/igv/igv_build_sites.txt.sample
[2024-04-17 17:40:25,618: DEBUG/main] Build site file [tool-data/shared/rviewer/rviewer_build_sites.txt] not found using sample [tool-data/shared/rviewer/rviewer_build_sites.txt.sample].
[2024-04-17 17:40:25,618: DEBUG/main] Loaded build site 'rviewer': tool-data/shared/rviewer/rviewer_build_sites.txt.sample
[2024-04-17 17:40:25,618: DEBUG/main] Loading references to tool sheds from /scratch/rico/tmp/tmp12w4107b/tool_sheds_conf.xml
[2024-04-17 17:40:25,618: DEBUG/main] Loaded reference to tool shed: Target Shed
[2024-04-17 17:40:25,620: DEBUG/main] Loading references to tool sheds from /scratch/rico/tmp/tmp12w4107b/tool_sheds_conf.xml
[2024-04-17 17:40:25,626: DEBUG/main] Loaded reference to tool shed: Target Shed
[2024-04-17 17:40:25,637: INFO/main] Successfully executed Celery task cleanup_short_term_storage to clean up short term storage cleanup_short_term_storage to clean up short term storage (5.570 ms)
[2024-04-17 17:40:26,260: INFO/main] Successfully executed Celery task prune_history_audit_table to pruning history audit table prune_history_audit_table to pruning history audit table (641.245 ms)
[2024-04-17 17:40:27,787: INFO/main] Task galaxy.prune_history_audit_table[a53db5e6-3ad7-463e-9c71-58b0cca1e6f9] succeeded in 5.20867227204144s: None
[2024-04-17 17:40:27,788: INFO/main] Task galaxy.cleanup_short_term_storage[9f43558c-252f-4782-a230-b3676057864b] succeeded in 5.188165600411594s: None

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
galaxy.util.task DEBUG 2024-04-17 17:40:45,655 [pN:main.1,p:100659,tN:HistoryAuditTablePruneTask] Executed periodic task HistoryAuditTablePruneTask (16.622 ms)

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-17 17:45:22,376: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 17:45:22,377: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 17:50:22,477: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 17:50:22,478: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 17:55:22,578: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 17:55:22,579: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 18:00:22,679: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 18:00:22,680: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 18:05:22,777: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 18:05:22,779: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 18:10:22,879: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 18:10:22,880: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 18:15:22,981: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 18:15:22,982: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 18:20:23,081: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 18:20:23,082: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 18:25:23,182: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 18:25:23,183: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
galaxy.jobs.runners.util.process_groups DEBUG 2024-04-17 18:26:42,103 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] check_pg(): No process found in process group 102620
galaxy.jobs.runners.local DEBUG 2024-04-17 18:26:42,105 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] execution finished: /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/4/galaxy_4.sh
galaxy.jobs DEBUG 2024-04-17 18:26:42,137 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] finish(): Moved /scratch/rico/tmp/tmp12w4107b/job_working_directory/000/4/outputs/dataset_1d496340-1818-4e76-86a7-2b787301634c.dat to /scratch/rico/tmp/tmp12w4107b/files/1/d/4/dataset_1d496340-1818-4e76-86a7-2b787301634c.dat
galaxy.model.metadata DEBUG 2024-04-17 18:26:42,183 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] loading metadata from file for: HistoryDatasetAssociation 5
galaxy.jobs DEBUG 2024-04-17 18:26:42,246 [pN:main.1,p:100659,tN:LocalRunner.work_thread-1] job_wrapper.finish for job 4 executed (119.368 ms)

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-17 18:30:23,284: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 18:30:23,285: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 18:35:23,385: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 18:35:23,386: DEBUG/MainProcess] beat: Waking up in 4.98 minutes.
[2024-04-17 18:40:22,289: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 18:40:22,291: INFO/MainProcess] Scheduler: Sending due task prune-history-audit-table (galaxy.prune_history_audit_table)
[2024-04-17 18:40:22,305: DEBUG/MainProcess] galaxy.prune_history_audit_table sent. id->23d46db2-021b-4a9a-bfe7-e19b74c40727
[2024-04-17 18:40:22,305: INFO/MainProcess] Scheduler: Sending due task cleanup-short-term-storage (galaxy.cleanup_short_term_storage)
[2024-04-17 18:40:22,313: DEBUG/MainProcess] galaxy.cleanup_short_term_storage sent. id->ffc0fd3c-94f3-4e53-b2e5-a759afa6c3c7
[2024-04-17 18:40:22,313: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==
[2024-04-17 18:40:22,884: INFO/main] Task galaxy.prune_history_audit_table[23d46db2-021b-4a9a-bfe7-e19b74c40727] received
[2024-04-17 18:40:22,885: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.prune_history_audit_table', '23d46db2-021b-4a9a-bfe7-e19b74c40727', {'lang': 'py', 'task': 'galaxy.prune_history_audit_table', 'id': '23d46db2-021b-4a9a-bfe7-e19b74c40727', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '23d46db2-021b-4a9a-bfe7-e19b74c40727', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': '23d46db2-021b-4a9a-bfe7-e19b74c40727', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '6fc8f858-fc5f-4147-89d3-311c0d4146f4'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': '23d46db2-021b-4a9a-bfe7-e19b74c40727', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-17 18:40:22,908: INFO/main] Successfully executed Celery task prune_history_audit_table to pruning history audit table prune_history_audit_table to pruning history audit table (21.650 ms)
[2024-04-17 18:40:22,908: INFO/main] Task galaxy.prune_history_audit_table[23d46db2-021b-4a9a-bfe7-e19b74c40727] succeeded in 0.02240056823939085s: None
[2024-04-17 18:40:22,924: INFO/main] Task galaxy.cleanup_short_term_storage[ffc0fd3c-94f3-4e53-b2e5-a759afa6c3c7] received
[2024-04-17 18:40:22,924: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.cleanup_short_term_storage', 'ffc0fd3c-94f3-4e53-b2e5-a759afa6c3c7', {'lang': 'py', 'task': 'galaxy.cleanup_short_term_storage', 'id': 'ffc0fd3c-94f3-4e53-b2e5-a759afa6c3c7', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': 'ffc0fd3c-94f3-4e53-b2e5-a759afa6c3c7', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': 'ffc0fd3c-94f3-4e53-b2e5-a759afa6c3c7', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '1801faf9-795d-4ceb-8695-daaae074cd23'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': 'ffc0fd3c-94f3-4e53-b2e5-a759afa6c3c7', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-17 18:40:22,926: INFO/main] Successfully executed Celery task cleanup_short_term_storage to clean up short term storage cleanup_short_term_storage to clean up short term storage (1.141 ms)
[2024-04-17 18:40:22,926: INFO/main] Task galaxy.cleanup_short_term_storage[ffc0fd3c-94f3-4e53-b2e5-a759afa6c3c7] succeeded in 0.0015790751203894615s: None

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
galaxy.util.task DEBUG 2024-04-17 18:40:45,672 [pN:main.1,p:100659,tN:HistoryAuditTablePruneTask] Executed periodic task HistoryAuditTablePruneTask (16.467 ms)

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-17 18:45:22,413: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 18:45:22,415: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 18:50:22,513: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 18:50:22,515: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 18:55:22,615: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 18:55:22,616: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 19:00:22,716: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 19:00:22,718: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 19:05:22,818: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 19:05:22,820: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 19:10:22,920: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 19:10:22,921: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 19:15:23,022: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 19:15:23,023: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 19:20:23,123: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 19:20:23,125: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 19:25:23,225: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 19:25:23,227: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 19:30:23,327: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 19:30:23,328: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 19:35:23,428: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 19:35:23,430: DEBUG/MainProcess] beat: Waking up in 4.98 minutes.
[2024-04-17 19:40:22,381: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 19:40:22,383: INFO/MainProcess] Scheduler: Sending due task prune-history-audit-table (galaxy.prune_history_audit_table)
[2024-04-17 19:40:22,397: DEBUG/MainProcess] galaxy.prune_history_audit_table sent. id->db7a2df4-7068-4bdd-a894-61ccf279a411
[2024-04-17 19:40:22,397: INFO/MainProcess] Scheduler: Sending due task cleanup-short-term-storage (galaxy.cleanup_short_term_storage)
[2024-04-17 19:40:22,402: DEBUG/MainProcess] galaxy.cleanup_short_term_storage sent. id->ca4a4fda-8edb-4c76-8a80-4522e0504d18
[2024-04-17 19:40:22,403: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==
[2024-04-17 19:40:22,481: INFO/main] Task galaxy.prune_history_audit_table[db7a2df4-7068-4bdd-a894-61ccf279a411] received
[2024-04-17 19:40:22,482: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.prune_history_audit_table', 'db7a2df4-7068-4bdd-a894-61ccf279a411', {'lang': 'py', 'task': 'galaxy.prune_history_audit_table', 'id': 'db7a2df4-7068-4bdd-a894-61ccf279a411', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': 'db7a2df4-7068-4bdd-a894-61ccf279a411', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': 'db7a2df4-7068-4bdd-a894-61ccf279a411', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '7ad4db53-22ef-478f-ac95-d3096db9ca8c'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': 'db7a2df4-7068-4bdd-a894-61ccf279a411', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-17 19:40:22,507: INFO/main] Successfully executed Celery task prune_history_audit_table to pruning history audit table prune_history_audit_table to pruning history audit table (23.302 ms)
[2024-04-17 19:40:22,508: INFO/main] Task galaxy.prune_history_audit_table[db7a2df4-7068-4bdd-a894-61ccf279a411] succeeded in 0.024009098298847675s: None
[2024-04-17 19:40:22,520: INFO/main] Task galaxy.cleanup_short_term_storage[ca4a4fda-8edb-4c76-8a80-4522e0504d18] received
[2024-04-17 19:40:22,520: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.cleanup_short_term_storage', 'ca4a4fda-8edb-4c76-8a80-4522e0504d18', {'lang': 'py', 'task': 'galaxy.cleanup_short_term_storage', 'id': 'ca4a4fda-8edb-4c76-8a80-4522e0504d18', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': 'ca4a4fda-8edb-4c76-8a80-4522e0504d18', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': 'ca4a4fda-8edb-4c76-8a80-4522e0504d18', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': 'ca87b97f-e4cf-4a0d-a3a8-1bf2668effc6'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': 'ca4a4fda-8edb-4c76-8a80-4522e0504d18', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-17 19:40:22,521: INFO/main] Successfully executed Celery task cleanup_short_term_storage to clean up short term storage cleanup_short_term_storage to clean up short term storage (0.610 ms)
[2024-04-17 19:40:22,522: INFO/main] Task galaxy.cleanup_short_term_storage[ca4a4fda-8edb-4c76-8a80-4522e0504d18] succeeded in 0.0010134056210517883s: None

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
galaxy.util.task DEBUG 2024-04-17 19:40:45,686 [pN:main.1,p:100659,tN:HistoryAuditTablePruneTask] Executed periodic task HistoryAuditTablePruneTask (12.946 ms)

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-17 19:45:22,503: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 19:45:22,505: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 19:50:22,508: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 19:50:22,510: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 19:55:22,610: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 19:55:22,611: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 20:00:22,669: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 20:00:22,670: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 20:05:22,771: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 20:05:22,773: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 20:10:22,873: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 20:10:22,874: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 20:15:22,974: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 20:15:22,976: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 20:20:22,996: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 20:20:22,998: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 20:25:23,059: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 20:25:23,060: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 20:30:23,068: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 20:30:23,070: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 20:35:23,170: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 20:35:23,172: DEBUG/MainProcess] beat: Waking up in 4.99 minutes.
[2024-04-17 20:40:22,473: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 20:40:22,475: INFO/MainProcess] Scheduler: Sending due task prune-history-audit-table (galaxy.prune_history_audit_table)
[2024-04-17 20:40:22,490: DEBUG/MainProcess] galaxy.prune_history_audit_table sent. id->e8ddf705-776f-4c84-b80e-bb18f38cad75
[2024-04-17 20:40:22,490: INFO/MainProcess] Scheduler: Sending due task cleanup-short-term-storage (galaxy.cleanup_short_term_storage)
[2024-04-17 20:40:22,498: DEBUG/MainProcess] galaxy.cleanup_short_term_storage sent. id->1aefecb8-332b-40d6-b213-aa1c690d56a8
[2024-04-17 20:40:22,498: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==
[2024-04-17 20:40:23,028: INFO/main] Task galaxy.prune_history_audit_table[e8ddf705-776f-4c84-b80e-bb18f38cad75] received
[2024-04-17 20:40:23,029: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.prune_history_audit_table', 'e8ddf705-776f-4c84-b80e-bb18f38cad75', {'lang': 'py', 'task': 'galaxy.prune_history_audit_table', 'id': 'e8ddf705-776f-4c84-b80e-bb18f38cad75', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': 'e8ddf705-776f-4c84-b80e-bb18f38cad75', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': 'e8ddf705-776f-4c84-b80e-bb18f38cad75', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '1d81c90e-96c6-4243-abb7-946fdb2e2571'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': 'e8ddf705-776f-4c84-b80e-bb18f38cad75', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-17 20:40:23,049: INFO/main] Successfully executed Celery task prune_history_audit_table to pruning history audit table prune_history_audit_table to pruning history audit table (18.926 ms)
[2024-04-17 20:40:23,050: INFO/main] Task galaxy.prune_history_audit_table[e8ddf705-776f-4c84-b80e-bb18f38cad75] succeeded in 0.01952252257615328s: None
[2024-04-17 20:40:23,065: INFO/main] Task galaxy.cleanup_short_term_storage[1aefecb8-332b-40d6-b213-aa1c690d56a8] received
[2024-04-17 20:40:23,065: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.cleanup_short_term_storage', '1aefecb8-332b-40d6-b213-aa1c690d56a8', {'lang': 'py', 'task': 'galaxy.cleanup_short_term_storage', 'id': '1aefecb8-332b-40d6-b213-aa1c690d56a8', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '1aefecb8-332b-40d6-b213-aa1c690d56a8', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': '1aefecb8-332b-40d6-b213-aa1c690d56a8', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '32f5a1d2-1ae8-4494-a803-3ac7fddeba4b'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': '1aefecb8-332b-40d6-b213-aa1c690d56a8', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-17 20:40:23,067: INFO/main] Successfully executed Celery task cleanup_short_term_storage to clean up short term storage cleanup_short_term_storage to clean up short term storage (0.666 ms)
[2024-04-17 20:40:23,067: INFO/main] Task galaxy.cleanup_short_term_storage[1aefecb8-332b-40d6-b213-aa1c690d56a8] succeeded in 0.0010927561670541763s: None

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
galaxy.util.task DEBUG 2024-04-17 20:40:45,699 [pN:main.1,p:100659,tN:HistoryAuditTablePruneTask] Executed periodic task HistoryAuditTablePruneTask (12.266 ms)

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-17 20:45:22,501: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 20:45:22,503: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 20:50:22,509: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 20:50:22,510: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 20:55:22,611: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 20:55:22,612: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 21:00:22,620: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 21:00:22,622: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 21:05:22,722: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 21:05:22,724: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 21:10:22,824: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 21:10:22,826: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 21:15:22,926: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 21:15:22,928: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 21:20:23,028: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 21:20:23,030: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 21:25:23,130: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 21:25:23,132: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 21:30:23,232: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 21:30:23,234: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 21:35:23,334: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 21:35:23,335: DEBUG/MainProcess] beat: Waking up in 4.99 minutes.
[2024-04-17 21:40:22,565: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 21:40:22,567: INFO/MainProcess] Scheduler: Sending due task prune-history-audit-table (galaxy.prune_history_audit_table)
[2024-04-17 21:40:22,591: DEBUG/MainProcess] galaxy.prune_history_audit_table sent. id->7f7da24d-3a93-4bc9-9348-9da8dc7f88d6
[2024-04-17 21:40:22,592: INFO/MainProcess] Scheduler: Sending due task cleanup-short-term-storage (galaxy.cleanup_short_term_storage)
[2024-04-17 21:40:22,603: DEBUG/MainProcess] galaxy.cleanup_short_term_storage sent. id->8bacded8-77ed-42b3-a237-a36afe528a0f
[2024-04-17 21:40:22,604: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==
[2024-04-17 21:40:22,990: INFO/main] Task galaxy.prune_history_audit_table[7f7da24d-3a93-4bc9-9348-9da8dc7f88d6] received
[2024-04-17 21:40:22,991: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.prune_history_audit_table', '7f7da24d-3a93-4bc9-9348-9da8dc7f88d6', {'lang': 'py', 'task': 'galaxy.prune_history_audit_table', 'id': '7f7da24d-3a93-4bc9-9348-9da8dc7f88d6', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '7f7da24d-3a93-4bc9-9348-9da8dc7f88d6', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': '7f7da24d-3a93-4bc9-9348-9da8dc7f88d6', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '3b3a686e-0ea6-4d27-9647-7f951444b466'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': '7f7da24d-3a93-4bc9-9348-9da8dc7f88d6', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-17 21:40:23,025: INFO/main] Task galaxy.cleanup_short_term_storage[8bacded8-77ed-42b3-a237-a36afe528a0f] received
[2024-04-17 21:40:23,026: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.cleanup_short_term_storage', '8bacded8-77ed-42b3-a237-a36afe528a0f', {'lang': 'py', 'task': 'galaxy.cleanup_short_term_storage', 'id': '8bacded8-77ed-42b3-a237-a36afe528a0f', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '8bacded8-77ed-42b3-a237-a36afe528a0f', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': '8bacded8-77ed-42b3-a237-a36afe528a0f', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '367f05e1-381e-43f4-a1d3-80e9f4a7b869'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': '8bacded8-77ed-42b3-a237-a36afe528a0f', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-17 21:40:23,027: INFO/main] Successfully executed Celery task cleanup_short_term_storage to clean up short term storage cleanup_short_term_storage to clean up short term storage (0.575 ms)
[2024-04-17 21:40:23,028: INFO/main] Task galaxy.cleanup_short_term_storage[8bacded8-77ed-42b3-a237-a36afe528a0f] succeeded in 0.0011010067537426949s: None
[2024-04-17 21:40:23,031: INFO/main] Successfully executed Celery task prune_history_audit_table to pruning history audit table prune_history_audit_table to pruning history audit table (38.911 ms)
[2024-04-17 21:40:23,031: INFO/main] Task galaxy.prune_history_audit_table[7f7da24d-3a93-4bc9-9348-9da8dc7f88d6] succeeded in 0.0397188663482666s: None

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
galaxy.util.task DEBUG 2024-04-17 21:40:45,719 [pN:main.1,p:100659,tN:HistoryAuditTablePruneTask] Executed periodic task HistoryAuditTablePruneTask (19.607 ms)

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-17 21:45:22,704: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 21:45:22,705: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 21:50:22,805: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 21:50:22,806: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 21:55:22,907: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 21:55:22,908: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 22:00:23,009: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 22:00:23,010: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 22:05:23,111: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 22:05:23,113: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 22:10:23,213: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 22:10:23,214: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 22:15:23,315: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 22:15:23,316: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 22:20:23,416: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 22:20:23,418: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 22:25:23,519: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 22:25:23,520: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 22:30:23,620: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 22:30:23,622: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 22:35:23,723: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 22:35:23,724: DEBUG/MainProcess] beat: Waking up in 4.98 minutes.
[2024-04-17 22:40:22,657: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 22:40:22,659: INFO/MainProcess] Scheduler: Sending due task prune-history-audit-table (galaxy.prune_history_audit_table)
[2024-04-17 22:40:22,675: DEBUG/MainProcess] galaxy.prune_history_audit_table sent. id->ad2db487-0ea1-43f4-84fa-7442fd8a5e12
[2024-04-17 22:40:22,675: INFO/MainProcess] Scheduler: Sending due task cleanup-short-term-storage (galaxy.cleanup_short_term_storage)
[2024-04-17 22:40:22,683: DEBUG/MainProcess] galaxy.cleanup_short_term_storage sent. id->03da7b60-f8e9-454d-a50d-05a6da16fa64
[2024-04-17 22:40:22,684: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==
[2024-04-17 22:40:23,291: INFO/main] Task galaxy.prune_history_audit_table[ad2db487-0ea1-43f4-84fa-7442fd8a5e12] received
[2024-04-17 22:40:23,295: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.prune_history_audit_table', 'ad2db487-0ea1-43f4-84fa-7442fd8a5e12', {'lang': 'py', 'task': 'galaxy.prune_history_audit_table', 'id': 'ad2db487-0ea1-43f4-84fa-7442fd8a5e12', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': 'ad2db487-0ea1-43f4-84fa-7442fd8a5e12', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': 'ad2db487-0ea1-43f4-84fa-7442fd8a5e12', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': 'ad285130-05f8-4cc7-903c-e6e90ecc1fb8'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': 'ad2db487-0ea1-43f4-84fa-7442fd8a5e12', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-17 22:40:23,322: INFO/main] Successfully executed Celery task prune_history_audit_table to pruning history audit table prune_history_audit_table to pruning history audit table (25.857 ms)
[2024-04-17 22:40:23,323: INFO/main] Task galaxy.prune_history_audit_table[ad2db487-0ea1-43f4-84fa-7442fd8a5e12] succeeded in 0.02652161754667759s: None
[2024-04-17 22:40:23,330: INFO/main] Task galaxy.cleanup_short_term_storage[03da7b60-f8e9-454d-a50d-05a6da16fa64] received
[2024-04-17 22:40:23,330: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.cleanup_short_term_storage', '03da7b60-f8e9-454d-a50d-05a6da16fa64', {'lang': 'py', 'task': 'galaxy.cleanup_short_term_storage', 'id': '03da7b60-f8e9-454d-a50d-05a6da16fa64', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '03da7b60-f8e9-454d-a50d-05a6da16fa64', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': '03da7b60-f8e9-454d-a50d-05a6da16fa64', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '2014ace3-bd75-456c-bc81-308cb28ed3c3'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': '03da7b60-f8e9-454d-a50d-05a6da16fa64', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-17 22:40:23,332: INFO/main] Successfully executed Celery task cleanup_short_term_storage to clean up short term storage cleanup_short_term_storage to clean up short term storage (0.579 ms)
[2024-04-17 22:40:23,332: INFO/main] Task galaxy.cleanup_short_term_storage[03da7b60-f8e9-454d-a50d-05a6da16fa64] succeeded in 0.0010370416566729546s: None

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
galaxy.util.task DEBUG 2024-04-17 22:40:45,733 [pN:main.1,p:100659,tN:HistoryAuditTablePruneTask] Executed periodic task HistoryAuditTablePruneTask (14.014 ms)

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-17 22:45:22,784: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 22:45:22,786: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 22:50:22,886: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 22:50:22,888: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 22:55:22,985: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 22:55:22,987: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 23:00:23,088: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 23:00:23,090: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 23:05:23,190: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 23:05:23,191: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 23:10:23,291: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 23:10:23,293: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 23:15:23,394: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 23:15:23,395: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 23:20:23,495: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 23:20:23,497: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 23:25:23,597: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 23:25:23,599: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 23:30:23,700: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 23:30:23,701: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 23:35:23,801: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 23:35:23,803: DEBUG/MainProcess] beat: Waking up in 4.98 minutes.
[2024-04-17 23:40:22,750: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 23:40:22,752: INFO/MainProcess] Scheduler: Sending due task prune-history-audit-table (galaxy.prune_history_audit_table)
[2024-04-17 23:40:22,767: DEBUG/MainProcess] galaxy.prune_history_audit_table sent. id->7c97376c-f7d0-486e-98b2-bf5ca47fe0a5
[2024-04-17 23:40:22,767: INFO/MainProcess] Scheduler: Sending due task cleanup-short-term-storage (galaxy.cleanup_short_term_storage)
[2024-04-17 23:40:22,776: DEBUG/MainProcess] galaxy.cleanup_short_term_storage sent. id->a9bc1f52-3052-47bb-bf10-486991139423
[2024-04-17 23:40:22,776: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==
[2024-04-17 23:40:23,257: INFO/main] Task galaxy.prune_history_audit_table[7c97376c-f7d0-486e-98b2-bf5ca47fe0a5] received
[2024-04-17 23:40:23,257: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.prune_history_audit_table', '7c97376c-f7d0-486e-98b2-bf5ca47fe0a5', {'lang': 'py', 'task': 'galaxy.prune_history_audit_table', 'id': '7c97376c-f7d0-486e-98b2-bf5ca47fe0a5', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '7c97376c-f7d0-486e-98b2-bf5ca47fe0a5', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': '7c97376c-f7d0-486e-98b2-bf5ca47fe0a5', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '4af19dee-e25a-49b9-b1a2-6605d3451c15'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': '7c97376c-f7d0-486e-98b2-bf5ca47fe0a5', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-17 23:40:23,285: INFO/main] Successfully executed Celery task prune_history_audit_table to pruning history audit table prune_history_audit_table to pruning history audit table (26.131 ms)
[2024-04-17 23:40:23,286: INFO/main] Task galaxy.prune_history_audit_table[7c97376c-f7d0-486e-98b2-bf5ca47fe0a5] succeeded in 0.02692567929625511s: None
[2024-04-17 23:40:23,298: INFO/main] Task galaxy.cleanup_short_term_storage[a9bc1f52-3052-47bb-bf10-486991139423] received
[2024-04-17 23:40:23,298: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.cleanup_short_term_storage', 'a9bc1f52-3052-47bb-bf10-486991139423', {'lang': 'py', 'task': 'galaxy.cleanup_short_term_storage', 'id': 'a9bc1f52-3052-47bb-bf10-486991139423', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': 'a9bc1f52-3052-47bb-bf10-486991139423', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': 'a9bc1f52-3052-47bb-bf10-486991139423', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': 'f7771e7e-90db-4cdc-8cd9-18e70a3fa746'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': 'a9bc1f52-3052-47bb-bf10-486991139423', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-17 23:40:23,300: INFO/main] Successfully executed Celery task cleanup_short_term_storage to clean up short term storage cleanup_short_term_storage to clean up short term storage (0.567 ms)
[2024-04-17 23:40:23,300: INFO/main] Task galaxy.cleanup_short_term_storage[a9bc1f52-3052-47bb-bf10-486991139423] succeeded in 0.0010050693526864052s: None

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
galaxy.util.task DEBUG 2024-04-17 23:40:45,747 [pN:main.1,p:100659,tN:HistoryAuditTablePruneTask] Executed periodic task HistoryAuditTablePruneTask (12.534 ms)

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-17 23:45:22,877: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 23:45:22,878: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 23:50:22,978: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 23:50:22,980: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-17 23:55:23,081: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-17 23:55:23,082: DEBUG/MainProcess] beat: Waking up in 4.62 minutes.
[2024-04-18 00:00:00,090: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 00:00:00,091: INFO/MainProcess] Scheduler: Sending due task celery.backend_cleanup (celery.backend_cleanup)
[2024-04-18 00:00:00,103: DEBUG/MainProcess] celery.backend_cleanup sent. id->6f922e02-085e-49f1-a998-1f04c7632b56
[2024-04-18 00:00:00,103: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==
[2024-04-18 00:00:00,221: INFO/main] Task celery.backend_cleanup[6f922e02-085e-49f1-a998-1f04c7632b56] received
[2024-04-18 00:00:00,221: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('celery.backend_cleanup', '6f922e02-085e-49f1-a998-1f04c7632b56', {'lang': 'py', 'task': 'celery.backend_cleanup', 'id': '6f922e02-085e-49f1-a998-1f04c7632b56', 'shadow': None, 'eta': None, 'expires': '2024-04-18T16:00:00.092245+00:00', 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '6f922e02-085e-49f1-a998-1f04c7632b56', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': '6f922e02-085e-49f1-a998-1f04c7632b56', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'expiration': '43200000', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': 'bc9c5721-a9cf-4a13-b510-4ec7fa01063e'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': '6f922e02-085e-49f1-a998-1f04c7632b56', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal',... kwargs:{})
[2024-04-18 00:00:00,223: INFO/main] Task celery.backend_cleanup[6f922e02-085e-49f1-a998-1f04c7632b56] succeeded in 0.0004079369828104973s: None

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-18 00:05:00,204: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 00:05:00,205: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 00:10:00,306: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 00:10:00,307: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 00:15:00,408: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 00:15:00,409: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 00:20:00,510: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 00:20:00,511: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 00:25:00,611: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 00:25:00,613: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 00:30:00,713: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 00:30:00,715: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 00:35:00,815: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 00:35:00,817: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 00:40:00,917: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 00:40:00,919: DEBUG/MainProcess] beat: Waking up in 21.82 seconds.
[2024-04-18 00:40:22,764: INFO/MainProcess] Scheduler: Sending due task prune-history-audit-table (galaxy.prune_history_audit_table)
[2024-04-18 00:40:22,782: DEBUG/MainProcess] galaxy.prune_history_audit_table sent. id->8c5510ac-04e3-4a6e-acc9-13c15b9ef7ba
[2024-04-18 00:40:22,782: INFO/MainProcess] Scheduler: Sending due task cleanup-short-term-storage (galaxy.cleanup_short_term_storage)
[2024-04-18 00:40:22,791: DEBUG/MainProcess] galaxy.cleanup_short_term_storage sent. id->bf653ea1-7409-4dfc-9966-dcaf49fad190
[2024-04-18 00:40:22,791: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==
[2024-04-18 00:40:23,126: INFO/main] Task galaxy.prune_history_audit_table[8c5510ac-04e3-4a6e-acc9-13c15b9ef7ba] received
[2024-04-18 00:40:23,126: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.prune_history_audit_table', '8c5510ac-04e3-4a6e-acc9-13c15b9ef7ba', {'lang': 'py', 'task': 'galaxy.prune_history_audit_table', 'id': '8c5510ac-04e3-4a6e-acc9-13c15b9ef7ba', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '8c5510ac-04e3-4a6e-acc9-13c15b9ef7ba', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': '8c5510ac-04e3-4a6e-acc9-13c15b9ef7ba', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': 'a418f92f-f78f-4db9-a894-9edc03b9ccfd'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': '8c5510ac-04e3-4a6e-acc9-13c15b9ef7ba', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-18 00:40:23,158: INFO/main] Successfully executed Celery task prune_history_audit_table to pruning history audit table prune_history_audit_table to pruning history audit table (29.530 ms)
[2024-04-18 00:40:23,159: INFO/main] Task galaxy.prune_history_audit_table[8c5510ac-04e3-4a6e-acc9-13c15b9ef7ba] succeeded in 0.0302895437926054s: None
[2024-04-18 00:40:23,174: INFO/main] Task galaxy.cleanup_short_term_storage[bf653ea1-7409-4dfc-9966-dcaf49fad190] received
[2024-04-18 00:40:23,174: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.cleanup_short_term_storage', 'bf653ea1-7409-4dfc-9966-dcaf49fad190', {'lang': 'py', 'task': 'galaxy.cleanup_short_term_storage', 'id': 'bf653ea1-7409-4dfc-9966-dcaf49fad190', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': 'bf653ea1-7409-4dfc-9966-dcaf49fad190', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': 'bf653ea1-7409-4dfc-9966-dcaf49fad190', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '43aad420-d1ad-428f-8393-13c09eddce76'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': 'bf653ea1-7409-4dfc-9966-dcaf49fad190', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-18 00:40:23,176: INFO/main] Successfully executed Celery task cleanup_short_term_storage to clean up short term storage cleanup_short_term_storage to clean up short term storage (0.578 ms)
[2024-04-18 00:40:23,176: INFO/main] Task galaxy.cleanup_short_term_storage[bf653ea1-7409-4dfc-9966-dcaf49fad190] succeeded in 0.0010311566293239594s: None

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
galaxy.util.task DEBUG 2024-04-18 00:40:45,759 [pN:main.1,p:100659,tN:HistoryAuditTablePruneTask] Executed periodic task HistoryAuditTablePruneTask (11.739 ms)

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-18 00:45:22,892: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 00:45:22,894: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 00:50:22,993: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 00:50:22,995: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 00:55:23,095: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 00:55:23,101: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 01:00:23,201: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 01:00:23,204: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 01:05:23,304: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 01:05:23,306: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 01:10:23,308: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 01:10:23,311: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 01:15:23,380: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 01:15:23,382: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 01:20:23,429: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 01:20:23,431: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 01:25:23,453: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 01:25:23,455: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 01:30:23,555: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 01:30:23,557: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 01:35:23,658: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 01:35:23,660: DEBUG/MainProcess] beat: Waking up in 4.98 minutes.
[2024-04-18 01:40:22,854: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 01:40:22,856: INFO/MainProcess] Scheduler: Sending due task prune-history-audit-table (galaxy.prune_history_audit_table)
[2024-04-18 01:40:22,872: DEBUG/MainProcess] galaxy.prune_history_audit_table sent. id->541cdee3-933e-4240-8f64-74d0dde00372
[2024-04-18 01:40:22,872: INFO/MainProcess] Scheduler: Sending due task cleanup-short-term-storage (galaxy.cleanup_short_term_storage)
[2024-04-18 01:40:22,880: DEBUG/MainProcess] galaxy.cleanup_short_term_storage sent. id->6f53829a-a597-4c4c-954b-0a7b1edd452c
[2024-04-18 01:40:22,880: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==
[2024-04-18 01:40:23,215: INFO/main] Task galaxy.prune_history_audit_table[541cdee3-933e-4240-8f64-74d0dde00372] received
[2024-04-18 01:40:23,215: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.prune_history_audit_table', '541cdee3-933e-4240-8f64-74d0dde00372', {'lang': 'py', 'task': 'galaxy.prune_history_audit_table', 'id': '541cdee3-933e-4240-8f64-74d0dde00372', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '541cdee3-933e-4240-8f64-74d0dde00372', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': '541cdee3-933e-4240-8f64-74d0dde00372', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '2e33c393-cb9a-4f7a-9a21-6ac307cbc3fe'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': '541cdee3-933e-4240-8f64-74d0dde00372', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-18 01:40:23,234: INFO/main] Successfully executed Celery task prune_history_audit_table to pruning history audit table prune_history_audit_table to pruning history audit table (17.088 ms)
[2024-04-18 01:40:23,234: INFO/main] Task galaxy.prune_history_audit_table[541cdee3-933e-4240-8f64-74d0dde00372] succeeded in 0.017524080350995064s: None
[2024-04-18 01:40:23,252: INFO/main] Task galaxy.cleanup_short_term_storage[6f53829a-a597-4c4c-954b-0a7b1edd452c] received
[2024-04-18 01:40:23,252: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.cleanup_short_term_storage', '6f53829a-a597-4c4c-954b-0a7b1edd452c', {'lang': 'py', 'task': 'galaxy.cleanup_short_term_storage', 'id': '6f53829a-a597-4c4c-954b-0a7b1edd452c', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '6f53829a-a597-4c4c-954b-0a7b1edd452c', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': '6f53829a-a597-4c4c-954b-0a7b1edd452c', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '5f6aa794-c1a3-467e-9df2-6bb0afadb4a3'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': '6f53829a-a597-4c4c-954b-0a7b1edd452c', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-18 01:40:23,254: INFO/main] Successfully executed Celery task cleanup_short_term_storage to clean up short term storage cleanup_short_term_storage to clean up short term storage (0.482 ms)
[2024-04-18 01:40:23,254: INFO/main] Task galaxy.cleanup_short_term_storage[6f53829a-a597-4c4c-954b-0a7b1edd452c] succeeded in 0.0008354252204298973s: None

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
galaxy.util.task DEBUG 2024-04-18 01:40:45,774 [pN:main.1,p:100659,tN:HistoryAuditTablePruneTask] Executed periodic task HistoryAuditTablePruneTask (14.047 ms)

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-18 01:45:22,973: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 01:45:22,975: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 01:50:23,076: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 01:50:23,077: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 01:55:23,177: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 01:55:23,180: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 02:00:23,280: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 02:00:23,282: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 02:05:23,382: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 02:05:23,383: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 02:10:23,484: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 02:10:23,486: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 02:15:23,586: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 02:15:23,587: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 02:20:23,659: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 02:20:23,661: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 02:25:23,761: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 02:25:23,762: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 02:30:23,863: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 02:30:23,864: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 02:35:23,885: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 02:35:23,887: DEBUG/MainProcess] beat: Waking up in 4.98 minutes.
[2024-04-18 02:40:22,946: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 02:40:22,948: INFO/MainProcess] Scheduler: Sending due task prune-history-audit-table (galaxy.prune_history_audit_table)
[2024-04-18 02:40:22,962: DEBUG/MainProcess] galaxy.prune_history_audit_table sent. id->eccc1d44-8734-44da-b894-bf09e7b73151
[2024-04-18 02:40:22,962: INFO/MainProcess] Scheduler: Sending due task cleanup-short-term-storage (galaxy.cleanup_short_term_storage)
[2024-04-18 02:40:22,969: DEBUG/MainProcess] galaxy.cleanup_short_term_storage sent. id->3a2ba05d-5889-423f-ae9b-f5259186bc0c
[2024-04-18 02:40:22,970: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==
[2024-04-18 02:40:23,026: INFO/main] Task galaxy.prune_history_audit_table[eccc1d44-8734-44da-b894-bf09e7b73151] received
[2024-04-18 02:40:23,026: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.prune_history_audit_table', 'eccc1d44-8734-44da-b894-bf09e7b73151', {'lang': 'py', 'task': 'galaxy.prune_history_audit_table', 'id': 'eccc1d44-8734-44da-b894-bf09e7b73151', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': 'eccc1d44-8734-44da-b894-bf09e7b73151', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': 'eccc1d44-8734-44da-b894-bf09e7b73151', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '10b90769-fd04-4bde-a13a-9a8656bfc4e9'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': 'eccc1d44-8734-44da-b894-bf09e7b73151', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-18 02:40:23,052: INFO/main] Successfully executed Celery task prune_history_audit_table to pruning history audit table prune_history_audit_table to pruning history audit table (21.478 ms)
[2024-04-18 02:40:23,052: INFO/main] Task galaxy.prune_history_audit_table[eccc1d44-8734-44da-b894-bf09e7b73151] succeeded in 0.023734571412205696s: None
[2024-04-18 02:40:23,063: INFO/main] Task galaxy.cleanup_short_term_storage[3a2ba05d-5889-423f-ae9b-f5259186bc0c] received
[2024-04-18 02:40:23,063: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.cleanup_short_term_storage', '3a2ba05d-5889-423f-ae9b-f5259186bc0c', {'lang': 'py', 'task': 'galaxy.cleanup_short_term_storage', 'id': '3a2ba05d-5889-423f-ae9b-f5259186bc0c', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '3a2ba05d-5889-423f-ae9b-f5259186bc0c', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': '3a2ba05d-5889-423f-ae9b-f5259186bc0c', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': 'ba9a3243-b86f-4e7b-a049-7e143c4d6d99'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': '3a2ba05d-5889-423f-ae9b-f5259186bc0c', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-18 02:40:23,067: INFO/main] Successfully executed Celery task cleanup_short_term_storage to clean up short term storage cleanup_short_term_storage to clean up short term storage (2.206 ms)
[2024-04-18 02:40:23,067: INFO/main] Task galaxy.cleanup_short_term_storage[3a2ba05d-5889-423f-ae9b-f5259186bc0c] succeeded in 0.002620689570903778s: None

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
galaxy.util.task DEBUG 2024-04-18 02:40:45,786 [pN:main.1,p:100659,tN:HistoryAuditTablePruneTask] Executed periodic task HistoryAuditTablePruneTask (12.200 ms)

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-18 02:45:23,070: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 02:45:23,072: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 02:50:23,172: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 02:50:23,173: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 02:55:23,273: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 02:55:23,275: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 03:00:23,373: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 03:00:23,375: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 03:05:23,381: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 03:05:23,383: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 03:10:23,453: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 03:10:23,455: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 03:15:23,481: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 03:15:23,483: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 03:20:23,584: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 03:20:23,586: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 03:25:23,593: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 03:25:23,595: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 03:30:23,659: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 03:30:23,662: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 03:35:23,762: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 03:35:23,764: DEBUG/MainProcess] beat: Waking up in 4.99 minutes.
[2024-04-18 03:40:23,039: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 03:40:23,040: INFO/MainProcess] Scheduler: Sending due task prune-history-audit-table (galaxy.prune_history_audit_table)
[2024-04-18 03:40:23,077: DEBUG/MainProcess] galaxy.prune_history_audit_table sent. id->b4261d3c-7485-4b1e-8820-49a0384e2597
[2024-04-18 03:40:23,078: INFO/MainProcess] Scheduler: Sending due task cleanup-short-term-storage (galaxy.cleanup_short_term_storage)
[2024-04-18 03:40:23,119: DEBUG/MainProcess] galaxy.cleanup_short_term_storage sent. id->8dc2bcbe-e093-41ee-af87-22815e238aa9
[2024-04-18 03:40:23,120: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==
[2024-04-18 03:40:23,136: INFO/main] Task galaxy.prune_history_audit_table[b4261d3c-7485-4b1e-8820-49a0384e2597] received
[2024-04-18 03:40:23,136: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.prune_history_audit_table', 'b4261d3c-7485-4b1e-8820-49a0384e2597', {'lang': 'py', 'task': 'galaxy.prune_history_audit_table', 'id': 'b4261d3c-7485-4b1e-8820-49a0384e2597', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': 'b4261d3c-7485-4b1e-8820-49a0384e2597', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': 'b4261d3c-7485-4b1e-8820-49a0384e2597', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '5c587ed4-b4b0-471a-a5c4-2d837c3ede48'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': 'b4261d3c-7485-4b1e-8820-49a0384e2597', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-18 03:40:23,165: INFO/main] Successfully executed Celery task prune_history_audit_table to pruning history audit table prune_history_audit_table to pruning history audit table (26.351 ms)
[2024-04-18 03:40:23,165: INFO/main] Task galaxy.prune_history_audit_table[b4261d3c-7485-4b1e-8820-49a0384e2597] succeeded in 0.027185991406440735s: None
[2024-04-18 03:40:23,183: INFO/main] Task galaxy.cleanup_short_term_storage[8dc2bcbe-e093-41ee-af87-22815e238aa9] received
[2024-04-18 03:40:23,183: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.cleanup_short_term_storage', '8dc2bcbe-e093-41ee-af87-22815e238aa9', {'lang': 'py', 'task': 'galaxy.cleanup_short_term_storage', 'id': '8dc2bcbe-e093-41ee-af87-22815e238aa9', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '8dc2bcbe-e093-41ee-af87-22815e238aa9', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': '8dc2bcbe-e093-41ee-af87-22815e238aa9', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': 'e3d8d8c0-e5c9-448e-8e5f-0c9691847758'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': '8dc2bcbe-e093-41ee-af87-22815e238aa9', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-18 03:40:23,185: INFO/main] Successfully executed Celery task cleanup_short_term_storage to clean up short term storage cleanup_short_term_storage to clean up short term storage (0.724 ms)
[2024-04-18 03:40:23,186: INFO/main] Task galaxy.cleanup_short_term_storage[8dc2bcbe-e093-41ee-af87-22815e238aa9] succeeded in 0.0011645713821053505s: None

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
galaxy.util.task DEBUG 2024-04-18 03:40:45,799 [pN:main.1,p:100659,tN:HistoryAuditTablePruneTask] Executed periodic task HistoryAuditTablePruneTask (11.776 ms)

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-18 03:45:23,220: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 03:45:23,222: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 03:50:23,322: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 03:50:23,324: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 03:55:23,425: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 03:55:23,427: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 04:00:23,527: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 04:00:23,529: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 04:05:23,630: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 04:05:23,631: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 04:10:23,732: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 04:10:23,734: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 04:15:23,739: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 04:15:23,741: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 04:20:23,842: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 04:20:23,844: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 04:25:23,944: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 04:25:23,946: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 04:30:23,995: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 04:30:23,996: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 04:35:24,097: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 04:35:24,099: DEBUG/MainProcess] beat: Waking up in 4.98 minutes.
[2024-04-18 04:40:23,131: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 04:40:23,133: INFO/MainProcess] Scheduler: Sending due task prune-history-audit-table (galaxy.prune_history_audit_table)
[2024-04-18 04:40:23,148: DEBUG/MainProcess] galaxy.prune_history_audit_table sent. id->f2234281-c0ed-401a-a539-f628dee016e7
[2024-04-18 04:40:23,148: INFO/MainProcess] Scheduler: Sending due task cleanup-short-term-storage (galaxy.cleanup_short_term_storage)
[2024-04-18 04:40:23,157: DEBUG/MainProcess] galaxy.cleanup_short_term_storage sent. id->74a34f0a-f180-4fe6-8414-ca8948a758ef
[2024-04-18 04:40:23,157: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==
[2024-04-18 04:40:24,049: INFO/main] Task galaxy.prune_history_audit_table[f2234281-c0ed-401a-a539-f628dee016e7] received
[2024-04-18 04:40:24,049: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.prune_history_audit_table', 'f2234281-c0ed-401a-a539-f628dee016e7', {'lang': 'py', 'task': 'galaxy.prune_history_audit_table', 'id': 'f2234281-c0ed-401a-a539-f628dee016e7', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': 'f2234281-c0ed-401a-a539-f628dee016e7', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': 'f2234281-c0ed-401a-a539-f628dee016e7', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '37f610fc-1840-4bbe-8790-b74e9f337092'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': 'f2234281-c0ed-401a-a539-f628dee016e7', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-18 04:40:24,078: INFO/main] Successfully executed Celery task prune_history_audit_table to pruning history audit table prune_history_audit_table to pruning history audit table (27.061 ms)
[2024-04-18 04:40:24,079: INFO/main] Task galaxy.prune_history_audit_table[f2234281-c0ed-401a-a539-f628dee016e7] succeeded in 0.027672781608998775s: None
[2024-04-18 04:40:24,090: INFO/main] Task galaxy.cleanup_short_term_storage[74a34f0a-f180-4fe6-8414-ca8948a758ef] received
[2024-04-18 04:40:24,090: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.cleanup_short_term_storage', '74a34f0a-f180-4fe6-8414-ca8948a758ef', {'lang': 'py', 'task': 'galaxy.cleanup_short_term_storage', 'id': '74a34f0a-f180-4fe6-8414-ca8948a758ef', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '74a34f0a-f180-4fe6-8414-ca8948a758ef', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': '74a34f0a-f180-4fe6-8414-ca8948a758ef', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '943c746c-554d-4557-a747-709a41f1f1ca'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': '74a34f0a-f180-4fe6-8414-ca8948a758ef', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-18 04:40:24,092: INFO/main] Successfully executed Celery task cleanup_short_term_storage to clean up short term storage cleanup_short_term_storage to clean up short term storage (0.507 ms)
[2024-04-18 04:40:24,092: INFO/main] Task galaxy.cleanup_short_term_storage[74a34f0a-f180-4fe6-8414-ca8948a758ef] succeeded in 0.0008853832259774208s: None

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
galaxy.util.task DEBUG 2024-04-18 04:40:45,813 [pN:main.1,p:100659,tN:HistoryAuditTablePruneTask] Executed periodic task HistoryAuditTablePruneTask (13.979 ms)

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-18 04:45:23,257: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 04:45:23,259: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 04:50:23,359: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 04:50:23,361: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 04:55:23,453: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 04:55:23,455: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 05:00:23,556: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 05:00:23,557: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 05:05:23,658: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 05:05:23,660: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 05:10:23,760: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 05:10:23,762: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 05:15:23,863: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 05:15:23,864: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 05:20:23,964: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 05:20:23,966: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 05:25:24,067: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 05:25:24,068: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 05:30:24,125: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 05:30:24,127: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 05:35:24,228: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 05:35:24,229: DEBUG/MainProcess] beat: Waking up in 4.98 minutes.
[2024-04-18 05:40:23,223: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 05:40:23,225: INFO/MainProcess] Scheduler: Sending due task prune-history-audit-table (galaxy.prune_history_audit_table)
[2024-04-18 05:40:23,241: DEBUG/MainProcess] galaxy.prune_history_audit_table sent. id->dc7dc411-8b76-41b6-a62e-9aa68bbd7d98
[2024-04-18 05:40:23,242: INFO/MainProcess] Scheduler: Sending due task cleanup-short-term-storage (galaxy.cleanup_short_term_storage)
[2024-04-18 05:40:23,251: DEBUG/MainProcess] galaxy.cleanup_short_term_storage sent. id->66986c3f-80e3-47ea-8c45-d279a175b01e
[2024-04-18 05:40:23,251: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==
[2024-04-18 05:40:23,929: INFO/main] Task galaxy.prune_history_audit_table[dc7dc411-8b76-41b6-a62e-9aa68bbd7d98] received
[2024-04-18 05:40:23,929: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.prune_history_audit_table', 'dc7dc411-8b76-41b6-a62e-9aa68bbd7d98', {'lang': 'py', 'task': 'galaxy.prune_history_audit_table', 'id': 'dc7dc411-8b76-41b6-a62e-9aa68bbd7d98', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': 'dc7dc411-8b76-41b6-a62e-9aa68bbd7d98', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': 'dc7dc411-8b76-41b6-a62e-9aa68bbd7d98', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '3c1d95b2-3778-40e8-bf33-491d96f79a6d'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': 'dc7dc411-8b76-41b6-a62e-9aa68bbd7d98', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-18 05:40:23,958: INFO/main] Successfully executed Celery task prune_history_audit_table to pruning history audit table prune_history_audit_table to pruning history audit table (27.948 ms)
[2024-04-18 05:40:23,959: INFO/main] Task galaxy.prune_history_audit_table[dc7dc411-8b76-41b6-a62e-9aa68bbd7d98] succeeded in 0.028529241681098938s: None
[2024-04-18 05:40:23,973: INFO/main] Task galaxy.cleanup_short_term_storage[66986c3f-80e3-47ea-8c45-d279a175b01e] received
[2024-04-18 05:40:23,973: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.cleanup_short_term_storage', '66986c3f-80e3-47ea-8c45-d279a175b01e', {'lang': 'py', 'task': 'galaxy.cleanup_short_term_storage', 'id': '66986c3f-80e3-47ea-8c45-d279a175b01e', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '66986c3f-80e3-47ea-8c45-d279a175b01e', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': '66986c3f-80e3-47ea-8c45-d279a175b01e', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': 'e4c4659d-87e7-4ff5-8b0c-8b1285d1eaa9'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': '66986c3f-80e3-47ea-8c45-d279a175b01e', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-18 05:40:23,975: INFO/main] Successfully executed Celery task cleanup_short_term_storage to clean up short term storage cleanup_short_term_storage to clean up short term storage (0.527 ms)
[2024-04-18 05:40:23,975: INFO/main] Task galaxy.cleanup_short_term_storage[66986c3f-80e3-47ea-8c45-d279a175b01e] succeeded in 0.0009161904454231262s: None

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
galaxy.util.task DEBUG 2024-04-18 05:40:45,827 [pN:main.1,p:100659,tN:HistoryAuditTablePruneTask] Executed periodic task HistoryAuditTablePruneTask (12.637 ms)

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-18 05:45:23,297: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 05:45:23,299: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 05:50:23,399: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 05:50:23,401: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 05:55:23,502: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 05:55:23,504: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 06:00:23,604: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 06:00:23,606: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 06:05:23,706: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 06:05:23,708: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 06:10:23,809: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 06:10:23,811: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 06:15:23,838: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 06:15:23,840: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 06:20:23,933: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 06:20:23,935: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 06:25:24,029: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 06:25:24,031: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 06:30:24,045: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 06:30:24,047: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 06:35:24,082: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 06:35:24,084: DEBUG/MainProcess] beat: Waking up in 4.99 minutes.
[2024-04-18 06:40:23,316: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 06:40:23,318: INFO/MainProcess] Scheduler: Sending due task prune-history-audit-table (galaxy.prune_history_audit_table)
[2024-04-18 06:40:23,343: DEBUG/MainProcess] galaxy.prune_history_audit_table sent. id->cd57a169-f939-4c17-bb93-0896a65750d3
[2024-04-18 06:40:23,343: INFO/MainProcess] Scheduler: Sending due task cleanup-short-term-storage (galaxy.cleanup_short_term_storage)
[2024-04-18 06:40:23,356: DEBUG/MainProcess] galaxy.cleanup_short_term_storage sent. id->ebf20dd8-d415-4d2b-bfcc-efe4aaccd1f2
[2024-04-18 06:40:23,357: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==
[2024-04-18 06:40:23,749: INFO/main] Task galaxy.prune_history_audit_table[cd57a169-f939-4c17-bb93-0896a65750d3] received
[2024-04-18 06:40:23,750: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.prune_history_audit_table', 'cd57a169-f939-4c17-bb93-0896a65750d3', {'lang': 'py', 'task': 'galaxy.prune_history_audit_table', 'id': 'cd57a169-f939-4c17-bb93-0896a65750d3', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': 'cd57a169-f939-4c17-bb93-0896a65750d3', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': 'cd57a169-f939-4c17-bb93-0896a65750d3', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': 'eb86918a-2429-4fca-8b3c-855b680002bc'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': 'cd57a169-f939-4c17-bb93-0896a65750d3', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-18 06:40:23,776: INFO/main] Successfully executed Celery task prune_history_audit_table to pruning history audit table prune_history_audit_table to pruning history audit table (24.995 ms)
[2024-04-18 06:40:23,776: INFO/main] Task galaxy.prune_history_audit_table[cd57a169-f939-4c17-bb93-0896a65750d3] succeeded in 0.025545649230480194s: None
[2024-04-18 06:40:23,790: INFO/main] Task galaxy.cleanup_short_term_storage[ebf20dd8-d415-4d2b-bfcc-efe4aaccd1f2] received
[2024-04-18 06:40:23,790: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.cleanup_short_term_storage', 'ebf20dd8-d415-4d2b-bfcc-efe4aaccd1f2', {'lang': 'py', 'task': 'galaxy.cleanup_short_term_storage', 'id': 'ebf20dd8-d415-4d2b-bfcc-efe4aaccd1f2', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': 'ebf20dd8-d415-4d2b-bfcc-efe4aaccd1f2', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': 'ebf20dd8-d415-4d2b-bfcc-efe4aaccd1f2', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': 'bfc2612a-ad55-4c4a-b0d4-0ca9b0652362'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': 'ebf20dd8-d415-4d2b-bfcc-efe4aaccd1f2', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-18 06:40:23,792: INFO/main] Successfully executed Celery task cleanup_short_term_storage to clean up short term storage cleanup_short_term_storage to clean up short term storage (0.546 ms)
[2024-04-18 06:40:23,792: INFO/main] Task galaxy.cleanup_short_term_storage[ebf20dd8-d415-4d2b-bfcc-efe4aaccd1f2] succeeded in 0.0009263940155506134s: None

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
galaxy.util.task DEBUG 2024-04-18 06:40:45,841 [pN:main.1,p:100659,tN:HistoryAuditTablePruneTask] Executed periodic task HistoryAuditTablePruneTask (13.355 ms)

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-18 06:45:23,457: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 06:45:23,459: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 06:50:23,559: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 06:50:23,561: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 06:55:23,662: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 06:55:23,664: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 07:00:23,764: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 07:00:23,766: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 07:05:23,866: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 07:05:23,868: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 07:10:23,969: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 07:10:23,971: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 07:15:24,071: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 07:15:24,073: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 07:20:24,081: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 07:20:24,083: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 07:25:24,097: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 07:25:24,099: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 07:30:24,113: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 07:30:24,115: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 07:35:24,129: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 07:35:24,131: DEBUG/MainProcess] beat: Waking up in 4.99 minutes.
[2024-04-18 07:40:23,408: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 07:40:23,410: INFO/MainProcess] Scheduler: Sending due task prune-history-audit-table (galaxy.prune_history_audit_table)
[2024-04-18 07:40:23,425: DEBUG/MainProcess] galaxy.prune_history_audit_table sent. id->a33384ab-568b-4871-a018-0bb7251256f4
[2024-04-18 07:40:23,426: INFO/MainProcess] Scheduler: Sending due task cleanup-short-term-storage (galaxy.cleanup_short_term_storage)
[2024-04-18 07:40:23,434: DEBUG/MainProcess] galaxy.cleanup_short_term_storage sent. id->3602327b-3bcb-459e-88db-431b691a4fb3
[2024-04-18 07:40:23,434: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==
[2024-04-18 07:40:23,603: INFO/main] Task galaxy.prune_history_audit_table[a33384ab-568b-4871-a018-0bb7251256f4] received
[2024-04-18 07:40:23,604: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.prune_history_audit_table', 'a33384ab-568b-4871-a018-0bb7251256f4', {'lang': 'py', 'task': 'galaxy.prune_history_audit_table', 'id': 'a33384ab-568b-4871-a018-0bb7251256f4', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': 'a33384ab-568b-4871-a018-0bb7251256f4', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': 'a33384ab-568b-4871-a018-0bb7251256f4', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '5f2ab7bb-638b-41fd-a64c-e5ece060823f'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': 'a33384ab-568b-4871-a018-0bb7251256f4', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-18 07:40:23,625: INFO/main] Successfully executed Celery task prune_history_audit_table to pruning history audit table prune_history_audit_table to pruning history audit table (20.377 ms)
[2024-04-18 07:40:23,625: INFO/main] Task galaxy.prune_history_audit_table[a33384ab-568b-4871-a018-0bb7251256f4] succeeded in 0.020866602659225464s: None
[2024-04-18 07:40:23,638: INFO/main] Task galaxy.cleanup_short_term_storage[3602327b-3bcb-459e-88db-431b691a4fb3] received
[2024-04-18 07:40:23,639: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.cleanup_short_term_storage', '3602327b-3bcb-459e-88db-431b691a4fb3', {'lang': 'py', 'task': 'galaxy.cleanup_short_term_storage', 'id': '3602327b-3bcb-459e-88db-431b691a4fb3', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '3602327b-3bcb-459e-88db-431b691a4fb3', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': '3602327b-3bcb-459e-88db-431b691a4fb3', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '7059a64c-c401-457e-a5c7-3435961f3748'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': '3602327b-3bcb-459e-88db-431b691a4fb3', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-18 07:40:23,640: INFO/main] Successfully executed Celery task cleanup_short_term_storage to clean up short term storage cleanup_short_term_storage to clean up short term storage (0.518 ms)
[2024-04-18 07:40:23,641: INFO/main] Task galaxy.cleanup_short_term_storage[3602327b-3bcb-459e-88db-431b691a4fb3] succeeded in 0.0009128199890255928s: None

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
galaxy.util.task DEBUG 2024-04-18 07:40:45,854 [pN:main.1,p:100659,tN:HistoryAuditTablePruneTask] Executed periodic task HistoryAuditTablePruneTask (12.817 ms)

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-18 07:45:23,534: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 07:45:23,536: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 07:50:23,637: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 07:50:23,639: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 07:55:23,739: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 07:55:23,741: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 08:00:23,841: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 08:00:23,843: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 08:05:23,933: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 08:05:23,935: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 08:10:24,036: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 08:10:24,037: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 08:15:24,137: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 08:15:24,138: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 08:20:24,145: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 08:20:24,147: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 08:25:24,161: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 08:25:24,163: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 08:30:24,209: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 08:30:24,211: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 08:35:24,311: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 08:35:24,313: DEBUG/MainProcess] beat: Waking up in 4.98 minutes.
[2024-04-18 08:40:23,460: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 08:40:23,462: INFO/MainProcess] Scheduler: Sending due task prune-history-audit-table (galaxy.prune_history_audit_table)
[2024-04-18 08:40:23,477: DEBUG/MainProcess] galaxy.prune_history_audit_table sent. id->80cd14d1-eb6d-4a69-992e-315f7baee5d0
[2024-04-18 08:40:23,477: INFO/MainProcess] Scheduler: Sending due task cleanup-short-term-storage (galaxy.cleanup_short_term_storage)
[2024-04-18 08:40:23,485: DEBUG/MainProcess] galaxy.cleanup_short_term_storage sent. id->e9156deb-0278-497b-9183-015cd83d485e
[2024-04-18 08:40:23,485: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==
[2024-04-18 08:40:24,134: INFO/main] Task galaxy.prune_history_audit_table[80cd14d1-eb6d-4a69-992e-315f7baee5d0] received
[2024-04-18 08:40:24,135: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.prune_history_audit_table', '80cd14d1-eb6d-4a69-992e-315f7baee5d0', {'lang': 'py', 'task': 'galaxy.prune_history_audit_table', 'id': '80cd14d1-eb6d-4a69-992e-315f7baee5d0', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '80cd14d1-eb6d-4a69-992e-315f7baee5d0', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': '80cd14d1-eb6d-4a69-992e-315f7baee5d0', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '98d69f20-b41e-4431-9464-9e3b01be2268'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': '80cd14d1-eb6d-4a69-992e-315f7baee5d0', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-18 08:40:24,153: INFO/main] Successfully executed Celery task prune_history_audit_table to pruning history audit table prune_history_audit_table to pruning history audit table (16.910 ms)
[2024-04-18 08:40:24,153: INFO/main] Task galaxy.prune_history_audit_table[80cd14d1-eb6d-4a69-992e-315f7baee5d0] succeeded in 0.01733121182769537s: None
[2024-04-18 08:40:24,169: INFO/main] Task galaxy.cleanup_short_term_storage[e9156deb-0278-497b-9183-015cd83d485e] received
[2024-04-18 08:40:24,170: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.cleanup_short_term_storage', 'e9156deb-0278-497b-9183-015cd83d485e', {'lang': 'py', 'task': 'galaxy.cleanup_short_term_storage', 'id': 'e9156deb-0278-497b-9183-015cd83d485e', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': 'e9156deb-0278-497b-9183-015cd83d485e', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': 'e9156deb-0278-497b-9183-015cd83d485e', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '4e80480e-b52f-4cab-9293-c5eeaf25aa4d'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': 'e9156deb-0278-497b-9183-015cd83d485e', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-18 08:40:24,171: INFO/main] Successfully executed Celery task cleanup_short_term_storage to clean up short term storage cleanup_short_term_storage to clean up short term storage (0.468 ms)
[2024-04-18 08:40:24,171: INFO/main] Task galaxy.cleanup_short_term_storage[e9156deb-0278-497b-9183-015cd83d485e] succeeded in 0.0008165780454874039s: None

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
galaxy.util.task DEBUG 2024-04-18 08:40:45,867 [pN:main.1,p:100659,tN:HistoryAuditTablePruneTask] Executed periodic task HistoryAuditTablePruneTask (11.811 ms)

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-18 08:45:23,585: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 08:45:23,587: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 08:50:23,687: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 08:50:23,689: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 08:55:23,741: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 08:55:23,743: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 09:00:23,843: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 09:00:23,845: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 09:05:23,941: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 09:05:23,942: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 09:10:23,990: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 09:10:23,992: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 09:15:24,092: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 09:15:24,094: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 09:20:24,194: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 09:20:24,196: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 09:25:24,257: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 09:25:24,259: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 09:30:24,273: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 09:30:24,275: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 09:35:24,375: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 09:35:24,377: DEBUG/MainProcess] beat: Waking up in 4.98 minutes.
[2024-04-18 09:40:23,552: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 09:40:23,554: INFO/MainProcess] Scheduler: Sending due task prune-history-audit-table (galaxy.prune_history_audit_table)
[2024-04-18 09:40:23,569: DEBUG/MainProcess] galaxy.prune_history_audit_table sent. id->0222ba67-932b-4b98-b938-57e4b5f2cd0c
[2024-04-18 09:40:23,569: INFO/MainProcess] Scheduler: Sending due task cleanup-short-term-storage (galaxy.cleanup_short_term_storage)
[2024-04-18 09:40:23,577: DEBUG/MainProcess] galaxy.cleanup_short_term_storage sent. id->07acb7cc-dca7-48ff-800f-c387d6511954
[2024-04-18 09:40:23,577: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==
[2024-04-18 09:40:24,094: INFO/main] Task galaxy.prune_history_audit_table[0222ba67-932b-4b98-b938-57e4b5f2cd0c] received
[2024-04-18 09:40:24,095: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.prune_history_audit_table', '0222ba67-932b-4b98-b938-57e4b5f2cd0c', {'lang': 'py', 'task': 'galaxy.prune_history_audit_table', 'id': '0222ba67-932b-4b98-b938-57e4b5f2cd0c', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '0222ba67-932b-4b98-b938-57e4b5f2cd0c', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': '0222ba67-932b-4b98-b938-57e4b5f2cd0c', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': 'da724dd0-d809-4e19-ac62-0f38ae074a0e'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': '0222ba67-932b-4b98-b938-57e4b5f2cd0c', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-18 09:40:24,121: INFO/main] Successfully executed Celery task prune_history_audit_table to pruning history audit table prune_history_audit_table to pruning history audit table (24.527 ms)
[2024-04-18 09:40:24,121: INFO/main] Task galaxy.prune_history_audit_table[0222ba67-932b-4b98-b938-57e4b5f2cd0c] succeeded in 0.02495371177792549s: None
[2024-04-18 09:40:24,137: INFO/main] Task galaxy.cleanup_short_term_storage[07acb7cc-dca7-48ff-800f-c387d6511954] received
[2024-04-18 09:40:24,137: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.cleanup_short_term_storage', '07acb7cc-dca7-48ff-800f-c387d6511954', {'lang': 'py', 'task': 'galaxy.cleanup_short_term_storage', 'id': '07acb7cc-dca7-48ff-800f-c387d6511954', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '07acb7cc-dca7-48ff-800f-c387d6511954', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': '07acb7cc-dca7-48ff-800f-c387d6511954', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '54e0e291-0917-4d4e-b62a-ab7aabf0f506'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': '07acb7cc-dca7-48ff-800f-c387d6511954', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-18 09:40:24,139: INFO/main] Successfully executed Celery task cleanup_short_term_storage to clean up short term storage cleanup_short_term_storage to clean up short term storage (0.468 ms)
[2024-04-18 09:40:24,140: INFO/main] Task galaxy.cleanup_short_term_storage[07acb7cc-dca7-48ff-800f-c387d6511954] succeeded in 0.0008255336433649063s: None

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
galaxy.util.task DEBUG 2024-04-18 09:40:45,881 [pN:main.1,p:100659,tN:HistoryAuditTablePruneTask] Executed periodic task HistoryAuditTablePruneTask (13.601 ms)

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-18 09:45:23,659: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 09:45:23,661: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 09:50:23,665: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 09:50:23,666: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 09:55:23,767: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 09:55:23,768: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 10:00:23,801: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 10:00:23,803: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 10:05:23,903: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 10:05:23,904: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 10:10:24,005: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 10:10:24,006: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 10:15:24,107: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 10:15:24,108: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 10:20:24,208: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 10:20:24,210: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 10:25:24,310: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 10:25:24,312: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 10:30:24,367: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 10:30:24,368: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 10:35:24,378: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 10:35:24,379: DEBUG/MainProcess] beat: Waking up in 4.99 minutes.
[2024-04-18 10:40:23,641: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 10:40:23,643: INFO/MainProcess] Scheduler: Sending due task prune-history-audit-table (galaxy.prune_history_audit_table)
[2024-04-18 10:40:23,657: DEBUG/MainProcess] galaxy.prune_history_audit_table sent. id->1cab00c7-ce29-45cc-8f15-06347cd63ec8
[2024-04-18 10:40:23,658: INFO/MainProcess] Scheduler: Sending due task cleanup-short-term-storage (galaxy.cleanup_short_term_storage)
[2024-04-18 10:40:23,663: DEBUG/MainProcess] galaxy.cleanup_short_term_storage sent. id->44be2fd4-fea4-4951-957f-fac0cf335b66
[2024-04-18 10:40:23,663: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery.log <==
[2024-04-18 10:40:23,980: INFO/main] Task galaxy.prune_history_audit_table[1cab00c7-ce29-45cc-8f15-06347cd63ec8] received
[2024-04-18 10:40:23,980: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.prune_history_audit_table', '1cab00c7-ce29-45cc-8f15-06347cd63ec8', {'lang': 'py', 'task': 'galaxy.prune_history_audit_table', 'id': '1cab00c7-ce29-45cc-8f15-06347cd63ec8', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '1cab00c7-ce29-45cc-8f15-06347cd63ec8', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': '1cab00c7-ce29-45cc-8f15-06347cd63ec8', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '4aa0edcd-532b-41b9-adf9-c21ec139f487'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': '1cab00c7-ce29-45cc-8f15-06347cd63ec8', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-18 10:40:24,006: INFO/main] Successfully executed Celery task prune_history_audit_table to pruning history audit table prune_history_audit_table to pruning history audit table (24.358 ms)
[2024-04-18 10:40:24,006: INFO/main] Task galaxy.prune_history_audit_table[1cab00c7-ce29-45cc-8f15-06347cd63ec8] succeeded in 0.02476848941296339s: None
[2024-04-18 10:40:24,029: INFO/main] Task galaxy.cleanup_short_term_storage[44be2fd4-fea4-4951-957f-fac0cf335b66] received
[2024-04-18 10:40:24,030: DEBUG/main] TaskPool: Apply <function fast_trace_task at 0x7faa4199a700> (args:('galaxy.cleanup_short_term_storage', '44be2fd4-fea4-4951-957f-fac0cf335b66', {'lang': 'py', 'task': 'galaxy.cleanup_short_term_storage', 'id': '44be2fd4-fea4-4951-957f-fac0cf335b66', 'shadow': None, 'eta': None, 'expires': None, 'group': None, 'group_index': None, 'retries': 0, 'timelimit': [None, None], 'root_id': '44be2fd4-fea4-4951-957f-fac0cf335b66', 'parent_id': None, 'argsrepr': '()', 'kwargsrepr': '{}', 'origin': 'gen100448@laila', 'ignore_result': False, 'properties': {'correlation_id': '44be2fd4-fea4-4951-957f-fac0cf335b66', 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'delivery_mode': 2, 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal'}, 'priority': 0, 'body_encoding': 'base64', 'delivery_tag': '3f24560d-9fc4-49e5-b0db-ad132e682c2f'}, 'reply_to': '800e039e-7621-3e92-b588-790623007822', 'correlation_id': '44be2fd4-fea4-4951-957f-fac0cf335b66', 'hostname': 'celery@laila', 'delivery_info': {'exchange': '', 'routing_key': 'galaxy.internal', 'priority': 0, 'redelivered': None},... kwargs:{})
[2024-04-18 10:40:24,031: INFO/main] Successfully executed Celery task cleanup_short_term_storage to clean up short term storage cleanup_short_term_storage to clean up short term storage (0.456 ms)
[2024-04-18 10:40:24,031: INFO/main] Task galaxy.cleanup_short_term_storage[44be2fd4-fea4-4951-957f-fac0cf335b66] succeeded in 0.000800449401140213s: None

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
galaxy.util.task DEBUG 2024-04-18 10:40:45,895 [pN:main.1,p:100659,tN:HistoryAuditTablePruneTask] Executed periodic task HistoryAuditTablePruneTask (13.565 ms)

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/celery-beat.log <==
[2024-04-18 10:45:23,761: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 10:45:23,763: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.
[2024-04-18 10:50:23,863: DEBUG/MainProcess] beat: Synchronizing schedule...
[2024-04-18 10:50:23,865: DEBUG/MainProcess] beat: Waking up in 5.00 minutes.

==> /scratch/rico/tmp/tmp12w4107b/gravity/log/gunicorn.log <==
uvicorn.access INFO 2024-04-18 10:50:58,143 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53956 - "GET / HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:50:58,166 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53956 - "GET /static/dist/base.css?v=1713286767000 HTTP/1.1" 304
uvicorn.access INFO 2024-04-18 10:50:58,184 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53956 - "GET /static/dist/analysis.bundled.js?v=1713286767000 HTTP/1.1" 304
uvicorn.access INFO 2024-04-18 10:50:58,184 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53974 - "GET /static/style/bootstrap-tour.css?v=1713286767000 HTTP/1.1" 304
uvicorn.access INFO 2024-04-18 10:50:58,184 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53976 - "GET /static/dist/libs.bundled.js?v=1713286767000 HTTP/1.1" 304
uvicorn.access INFO 2024-04-18 10:50:58,185 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53968 - "GET /static/style/jquery-ui/smoothness/jquery-ui.css?v=1713286767000 HTTP/1.1" 304
uvicorn.access INFO 2024-04-18 10:50:58,500 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53976 - "GET /favicon.ico HTTP/1.1" 404
uvicorn.access INFO 2024-04-18 10:50:58,633 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53976 - "GET /api/webhooks HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:50:58,655 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53956 - "GET /static/dist/f49a6a2402ca42baecbb.png HTTP/1.1" 304
uvicorn.access INFO 2024-04-18 10:50:58,712 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53956 - "GET /welcome HTTP/1.1" 302
uvicorn.access INFO 2024-04-18 10:50:58,723 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53956 - "GET /static/dist/7c05f33b4fe5f8132439.woff2 HTTP/1.1" 304
uvicorn.access INFO 2024-04-18 10:50:58,724 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53974 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:50:58,734 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53982 - "GET /api/webhooks HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:50:58,742 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53976 - "GET /api/users/current HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:50:58,747 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53956 - "GET /static/dist/1551f4f60c37af51121f.woff2 HTTP/1.1" 304
uvicorn.access INFO 2024-04-18 10:50:58,748 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53974 - "GET /static/welcome.html HTTP/1.1" 304
uvicorn.access INFO 2024-04-18 10:50:58,765 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53956 - "GET /static/favicon.svg HTTP/1.1" 304
uvicorn.access INFO 2024-04-18 10:50:58,777 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53976 - "GET /static/dist/base.css HTTP/1.1" 304
uvicorn.access INFO 2024-04-18 10:50:58,789 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53982 - "GET /api/tools?in_panel=true&view=default HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:50:58,804 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53968 - "GET /api/configuration HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:50:58,823 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53986 - "GET /history/current_history_json HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:50:58,852 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53974 - "GET /api/histories?view=summary HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:50:58,960 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53976 - "GET /api/datatypes?extension_only=False HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:50:58,961 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53968 - "GET /history/current_history_json HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:50:59,075 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53986 - "GET /api/histories/d23b2492b9db9f5f/contents?v=dev&limit=1000&q=update_time-ge&qv=2024-04-18T14:50:58.377Z HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:50:59,134 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53956 - "GET /api/genomes HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:50:59,139 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53974 - "GET /api/histories/d23b2492b9db9f5f?view=summary&keys=size,contents_active,user_id HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:50:59,174 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53982 - "GET /api/histories/d23b2492b9db9f5f/contents?v=dev&order=hid&offset=0&limit=100&q=deleted&qv=false&q=visible&qv=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:50:59,177 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53986 - "GET /api/users/d23b2492b9db9f5f HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:00,347 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53982 - "GET /static/dist/7a3337626410ca2f4071.woff2 HTTP/1.1" 304
uvicorn.access INFO 2024-04-18 10:51:00,423 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53986 - "GET /api/datasets/b29f83d2817c3b8c HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:02,135 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53990 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:05,174 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:54002 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:08,211 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53098 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:08,694 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53098 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:09,332 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53098 - "GET /api/datasets/b29f83d2817c3b8c/display?to_ext=tgz HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:11,243 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53114 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:14,310 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53130 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:17,373 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40312 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:18,711 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40312 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:20,419 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40312 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:23,485 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40328 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:26,535 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:51608 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:28,699 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:51614 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:29,570 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:51614 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:32,609 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:51628 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:35,647 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:51630 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:38,695 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:38146 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:38,707 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:38150 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:41,730 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:38156 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:44,765 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:38172 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:47,810 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:38190 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:48,711 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:38190 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:50,843 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:38206 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:53,887 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:38208 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:56,922 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40780 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:58,706 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40780 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:51:59,955 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40780 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:03,215 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:40790 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
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uvicorn.access INFO 2024-04-18 10:52:08,707 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:33564 - "GET /api/entry_points?running=true HTTP/1.1" 200
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uvicorn.access INFO 2024-04-18 10:52:18,392 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:46676 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:18,705 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:46676 - "GET /api/entry_points?running=true HTTP/1.1" 200
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uvicorn.access INFO 2024-04-18 10:52:33,568 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:45378 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:36,599 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37798 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:38,718 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37810 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:39,631 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37810 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:42,676 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37820 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:43,999 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37820 - "GET /api/configuration HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:44,056 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37822 - "GET /api/datasets/b29f83d2817c3b8c HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:44,106 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37822 - "GET /api/users/current HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:44,203 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37830 - "GET /api/histories?view=summary HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:44,206 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37822 - "GET /history/current_history_json HTTP/1.1" 200
/scratch/rico/galaxy/lib/galaxy/model/__init__.py:467: SAWarning: Dialect sqlite+pysqlite does *not* support Decimal objects natively, and SQLAlchemy must convert from floating point - rounding errors and other issues may occur. Please consider storing Decimal numbers as strings or integers on this platform for lossless storage.
  return self.text_metrics + self.numeric_metrics
uvicorn.access INFO 2024-04-18 10:52:44,229 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37820 - "GET /api/jobs/8d6bba82c3443fc0?full=True HTTP/1.1" 200
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uvicorn.access INFO 2024-04-18 10:52:44,584 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37822 - "GET /api/datasets/b29f83d2817c3b8c/storage HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:44,604 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37834 - "GET /api/datasets/b29f83d2817c3b8c/metrics?hda_ldda=hda HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:44,639 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37830 - "GET /history/current_history_json HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:44,681 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37820 - "GET /api/datasets/b29f83d2817c3b8c/parameters_display?hda_ldda=hda HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:44,782 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37822 - "GET /api/histories?view=summary HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:44,852 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37846 - "GET /api/jobs/8d6bba82c3443fc0?full=True HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:44,914 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37852 - "GET /api/datasets/b29f83d2817c3b8c HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:44,948 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37846 - "GET /api/configuration/decode/8d6bba82c3443fc0 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:45,073 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37852 - "GET /api/configuration/decode/b29f83d2817c3b8c HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:45,080 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37834 - "GET /api/configuration/decode/d23b2492b9db9f5f HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:45,123 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37830 - "GET /api/datasets/8d6bba82c3443fc0 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:45,171 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37820 - "GET /api/datasets/9eb32cf8214ea72d HTTP/1.1" 200
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uvicorn.access INFO 2024-04-18 10:52:45,710 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:37822 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:48,712 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:59030 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:48,746 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:59030 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:51,779 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:59036 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:54,811 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:59042 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:57,846 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:34806 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:52:58,714 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:34806 - "GET /api/entry_points?running=true HTTP/1.1" 200
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uvicorn.access INFO 2024-04-18 10:53:03,914 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:34830 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:53:06,947 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53966 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:53:08,718 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53966 - "GET /api/entry_points?running=true HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:53:09,979 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53966 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
uvicorn.access INFO 2024-04-18 10:53:13,011 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:53974 - "GET /history/current_history_json?since=2024-04-17T22:26:42.000204 HTTP/1.1" 200
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uvicorn.access INFO 2024-04-18 10:53:18,716 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:39008 - "GET /api/entry_points?running=true HTTP/1.1" 200
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uvicorn.access INFO 2024-04-18 10:53:38,716 [pN:main.1,p:100659,tN:MainThread] 127.0.0.1:59340 - "GET /api/entry_points?running=true HTTP/1.1" 200
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