Mercurial > repos > richard-burhans > segalign

annotate system_options.xml @ 12:e6fde4082c76 draft

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planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 1bca60cee477d88c4cd04ced9540ff26d3b7e6d5
author richard-burhans
date Sat, 13 Jul 2024 15:43:14 +0000
parents 5c72425b7f1b
children 25fa179d9d0a
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5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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1 <macros>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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2 <xml name="system_options">
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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3 <section name="system_options" title="System Options">
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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4 <param argument="--wga_chunk_size" type="integer" value="250000" label="Chunk sizes for GPU calls for Xdrop - ⚠ change only if you are a developer"/>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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5 <param argument="--lastz_interval_size" type="integer" value="10000000" label="LASTZ interval for Ydrop - ⚠ change only if you are a developer"/>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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6 <param argument="--seq_block_size" type="integer" value="500000000" label="LASTZ interval for Ydrop - ⚠ change only if you are a developer"/>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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7 <param argument="--num_gpu" type="integer" value="-1" label="Specify number of GPUs to use - -1 if all the GPUs should be used"/>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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8 <param argument="--debug" type="boolean" value="false" label="Print debug messages"/>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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9 </section>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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10 </xml>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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11 </macros>