Mercurial > repos > richard-burhans > segalign

diff ungapped_extension_options.xml @ 0:5c72425b7f1b draft

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planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
author richard-burhans
date Wed, 17 Apr 2024 18:06:54 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/ungapped_extension_options.xml	Wed Apr 17 18:06:54 2024 +0000
@@ -0,0 +1,9 @@
+<macros>
+    <xml name="ungapped_extension_options">
+        <section name="ungapped_extension_options" expanded="false" title="Ungapped Extension Options">
+            <param argument="--xdrop" type="integer" value="910" label="X-drop value for gap-free extension"/>
+            <param argument="--hspthresh" type="integer" value="3000" label="Segment score threshold for high scoring pairs"/>
+            <param argument="--noentropy" type="boolean" checked="false" label="Don't adjust low score segment pair scores using entropy factor after filtering stage"/>
+        </section>
+    </xml>
+</macros>