Mercurial > repos > richard-burhans > segalign
view lastz-cmd.ini @ 22:860e1f6f3de4 draft
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 52a5597a89b6f4ecba8d2c45ef0369d8d2285248
| author | richard-burhans |
|---|---|
| date | Mon, 12 Aug 2024 15:41:13 +0000 |
| parents | 5c72425b7f1b |
| children |
line wrap: on
line source
[arguments] flag_args = allgappedbounds anyornone gapped gfextend markend nocensus noentropy nofilter nogapped nogfextend nomirror norecoverseeds notransition notrivial notwins noytrim recoverseeds self version yasra75 yasra85 yasra85short yasra90 yasra95 yasra95short yasra98 str_args = action:query action:target ambiguous ball chores filter format gap hspthresh include match maxwordcount mismatch nochain output outputmasking outputmasking+ outputmasking+:soft outputmasking:soft querydepth queryhsplimit rdotplot readgroup scores seed segments show strand targetcapsule twins writecapsule writesegments int_args = allocate:query allocate:target allocate:traceback exact gappedthresh inner masking queryhspbest step word xdrop ydrop bool_str_args= census census16 census32 chain entropy help infer inferonly infscores tableonly bool_int_args= progress progress+masking transition