# HG changeset patch
# User richard-burhans
# Date 1723062885 0
# Node ID 96ff17622b17a3e35e9b65185187b3d14b8d9c71
# Parent  cefa7625d6cba047b6c740d7c5259b0f5773dbbd
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 4b56e02cfd6394c55895dd013105c4ef04519842

diff -r cefa7625d6cb -r 96ff17622b17 runner.py
--- a/runner.py	Thu Aug 01 18:39:46 2024 +0000
+++ b/runner.py	Wed Aug 07 20:34:45 2024 +0000
@@ -386,7 +386,7 @@
             beg: int = time.monotonic_ns()
             r_beg = resource.getrusage(resource.RUSAGE_CHILDREN)
 
-        process = subprocess.run(run_args, stdout=subprocess.PIPE, stderr=subprocess.PIPE, text=True)
+        process = subprocess.run(run_args, stdout=subprocess.PIPE, stderr=subprocess.PIPE, bufsize=1, text=True)
 
         for line in process.stdout.splitlines():
             commands.add(line)