Mercurial > repos > rmarenco > blastxmltopsl

diff blastXmlToPsl.xml @ 0:d5c3e461f484 draft

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planemo upload for repository https://github.com/remimarenco/blastXmlToPsl commit 748d4887ce50f21d581c973686a4c2f9eaa29cad-dirty
author rmarenco
date Thu, 14 Jul 2016 17:45:34 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/blastXmlToPsl.xml	Thu Jul 14 17:45:34 2016 -0400
@@ -0,0 +1,20 @@
+<tool id="blastXmlToPsl" name="blastXmlToPsl" version="0.1.0">
+    <requirements>
+        <requirement type="package" version="1.0">blastXmlToPsl</requirement>
+    </requirements>
+    <stdio>
+        <exit_code range="1:" />
+    </stdio>
+    <command><![CDATA[
+        blastXmlToPsl -convertToNucCoords $input $output
+    ]]></command>
+    <inputs>
+        <param type="data" name="input" format="xml" />
+    </inputs>
+    <outputs>
+        <data format="psl" name="output" />
+    </outputs>
+    <help><![CDATA[
+        blastXmlToPsl - convert blast XML output to PSLs
+    ]]></help>
+</tool>
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