Mercurial > repos > rmarenco > hub_archive_creator
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author | rmarenco |
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date | Tue, 01 Mar 2016 19:43:25 -0500 |
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<tool id="hubArchiveCreator" name="Hub Archive Creator" version="1.6.0"> <description> This Galaxy tool permits to prepare your files to be ready for Assembly Hub visualization. </description> <command><![CDATA[ mkdir -p $output.files_path && python $__tool_directory__/hubArchiveCreator.py -g $GFF3_Track -f $Fasta_File -d $__tool_directory__ -e $output.files_path -o $output; ]]></command> <inputs> <param format="gff3" name="GFF3_Track" type="data" label="GFF3 track to display" /> <param format="fasta" name="Fasta_File" type="data" label="Fasta track to process" /> </inputs> <outputs> <data format="huba" name="output" /> </outputs> <stdio> <regex match="^pass1" source="stderr" level="log" description="bedToBigBed" /> <!-- TODO: Add the case pass1 and 0 chroms --> <!-- TODO: Add the case pass2 and 0 records or 0 fields --> </stdio> <help> This Galaxy tool permits to prepare your files to be ready for Assembly Hub visualization. </help> </tool>