annotate templates/trackDb/layout.txt @ 24:fcc1021bd496 draft

planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit 93e2e2fb59f99677425104a80c17f665fa7b2b4a-dirty

% for trackDb in trackDbs:
    % if "bigWig" in trackDb.trackType:

track ${trackDb.trackName}
longLabel ${trackDb.longLabel}
shortLabel ${trackDb.shortLabel}
bigDataUrl ${trackDb.trackDataURL}
visibility ${trackDb.visibility}
priority ${trackDb.priority}
color ${trackDb.track_color}
group ${trackDb.group_name.lower().replace(' ', '_')}
type ${trackDb.trackType}
autoScale on
maxHeightPixels 100:32:8
windowingFunction mean+whiskers

    % else:

## See this http://genome.ucsc.edu/goldenPath/help/hgTrackHubHelp.html
track ${trackDb.trackName}
longLabel ${trackDb.longLabel}
shortLabel ${trackDb.shortLabel}
bigDataUrl ${trackDb.trackDataURL}
type ${trackDb.trackType}
visibility ${trackDb.visibility}
thickDrawItem ${trackDb.thickDrawItem}
priority ${trackDb.priority}
color ${trackDb.track_color}
group ${trackDb.group_name.lower().replace(' ', '_')}

    % endif
% endfor